Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:38:16 (3967789): wrapper (7.7.26015): starting
07:38:16 (3967789): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 07:38:16] Arguments: --nthreads 8
[2025-11-24 07:38:16] Threads: 8
[2025-11-24 07:38:16] Checking for CVMFS
[2025-11-24 07:38:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:38:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:38:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:38:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:38:19] 2.13.3.0 6048 27046 337656 153246 3 746 19052496 25181184 26181 16776704 0 182365879 99.644 158840118 28852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 07:38:19] CVMFS is ok
[2025-11-24 07:38:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:38:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:38:19] Further information can be found at the LHC@home message board.
[2025-11-24 07:38:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:38:19] Checking for apptainer binary...
[2025-11-24 07:38:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:38:19] Running /usr/bin/apptainer --version
[2025-11-24 07:38:19] apptainer version 1.4.4-1.el9
[2025-11-24 07:38:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:38:20] c-16-35.aglt2.org
[2025-11-24 07:38:20] apptainer works
[2025-11-24 07:38:20] Set ATHENA_PROC_NUMBER=8
[2025-11-24 07:38:20] Set ATHENA_CORE_NUMBER=8
[2025-11-24 07:38:20] Starting ATLAS job with PandaID=6891558275
[2025-11-24 07:38:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:24:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:24:24] 2025-11-25 16:23:13,762 | INFO     | monitor loop #5624: job 0:6891558275 is in state 'finished'
[2025-11-25 11:24:24] 2025-11-25 16:23:13,781 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:24:24] 2025-11-25 16:23:15,420 | INFO     | time since job start (99839s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:16,289 | INFO     | monitor loop #5625: job 0:6891558275 is in state 'finished'
[2025-11-25 11:24:24] 2025-11-25 16:23:16,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:24:24] 2025-11-25 16:23:17,431 | INFO     | time since job start (99841s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:18,819 | INFO     | monitor loop #5626: job 0:6891558275 is in state 'finished'
[2025-11-25 11:24:24] 2025-11-25 16:23:18,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:24:24] 2025-11-25 16:23:19,451 | INFO     | time since job start (99843s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:21,363 | INFO     | monitor loop #5627: job 0:6891558275 is in state 'finished'
[2025-11-25 11:24:24] 2025-11-25 16:23:21,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:24:24] 2025-11-25 16:23:21,461 | INFO     | time since job start (99845s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:23,477 | INFO     | time since job start (99847s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:23,873 | INFO     | monitor loop #5628: job 0:6891558275 is in state 'finished'
[2025-11-25 11:24:24] 2025-11-25 16:23:23,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:24:24] 2025-11-25 16:23:24,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 11:24:24] 2025-11-25 16:23:24,389 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2800.6521041666674
[2025-11-25 11:24:24] 2025-11-25 16:23:24,398 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891558275/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 11:24:24] 2025-11-25 16:23:24,399 | INFO     | extracted standard info from prmon json
[2025-11-25 11:24:24] 2025-11-25 16:23:24,411 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 11:24:24] 2025-11-25 16:23:24,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 11:24:24] 2025-11-25 16:23:24,548 | INFO     | fitting pss+swap vs Time
[2025-11-25 11:24:24] 2025-11-25 16:23:24,555 | INFO     | sum of square deviations: 1352807575943.3237
[2025-11-25 11:24:24] 2025-11-25 16:23:24,821 | INFO     | sum of deviations: 5758914981964.84
[2025-11-25 11:24:24] 2025-11-25 16:23:24,822 | INFO     | mean x: 1764037891.6548347
[2025-11-25 11:24:24] 2025-11-25 16:23:24,822 | INFO     | mean y: 2918998.836597307
[2025-11-25 11:24:24] 2025-11-25 16:23:24,822 | INFO     | intersect: -7506607428.764004
[2025-11-25 11:24:24] 2025-11-25 16:23:24,840 | INFO     | chi2: 16.08460075821374
[2025-11-25 11:24:24] 2025-11-25 16:23:24,843 | INFO     | sum of square deviations: 1340427482129.1394
[2025-11-25 11:24:24] 2025-11-25 16:23:25,062 | INFO     | sum of deviations: 6306635711881.42
[2025-11-25 11:24:24] 2025-11-25 16:23:25,066 | INFO     | mean x: 1764037739.1583793
[2025-11-25 11:24:24] 2025-11-25 16:23:25,066 | INFO     | mean y: 2925744.661141805
[2025-11-25 11:24:24] 2025-11-25 16:23:25,067 | INFO     | intersect: -8296772337.633905
[2025-11-25 11:24:24] 2025-11-25 16:23:25,069 | INFO     | chi2: 12.972174003812828
[2025-11-25 11:24:24] 2025-11-25 16:23:25,069 | INFO     | current chi2=12.972174003812828 (change=19.350351315443895 %)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,069 | INFO     | right removable region: 1628
[2025-11-25 11:24:24] 2025-11-25 16:23:25,075 | INFO     | sum of square deviations: 1340426331059.137
[2025-11-25 11:24:24] 2025-11-25 16:23:25,214 | INFO     | sum of deviations: 5111366289099.139
[2025-11-25 11:24:24] 2025-11-25 16:23:25,214 | INFO     | mean x: 1764038044.1583793
[2025-11-25 11:24:24] 2025-11-25 16:23:25,214 | INFO     | mean y: 2926974.2087170044
[2025-11-25 11:24:24] 2025-11-25 16:23:25,214 | INFO     | intersect: -6723772123.439583
[2025-11-25 11:24:24] 2025-11-25 16:23:25,221 | INFO     | chi2: 12.17871591993158
[2025-11-25 11:24:24] 2025-11-25 16:23:25,221 | INFO     | current chi2=12.17871591993158 (change=24.28338071299398 %)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,221 | INFO     | left removable region: 10
[2025-11-25 11:24:24] 2025-11-25 16:23:25,223 | INFO     | sum of square deviations: 1313455352545.7769
[2025-11-25 11:24:24] 2025-11-25 16:23:25,369 | INFO     | sum of deviations: 5272448064668.165
[2025-11-25 11:24:24] 2025-11-25 16:23:25,369 | INFO     | mean x: 1764038013.6662545
[2025-11-25 11:24:24] 2025-11-25 16:23:25,370 | INFO     | mean y: 2941715.2484548828
[2025-11-25 11:24:24] 2025-11-25 16:23:25,370 | INFO     | intersect: -7078226893.28372
[2025-11-25 11:24:24] 2025-11-25 16:23:25,372 | INFO     | chi2: 5.866017026657396
[2025-11-25 11:24:24] 2025-11-25 16:23:25,376 | INFO     | current memory leak: 4.01 B/s (using 1618 data points, chi2=5.87)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,378 | INFO     | could have reported an average CPU frequency of 2791 MHz (58 samples)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,378 | INFO     | ..............................
[2025-11-25 11:24:24] 2025-11-25 16:23:25,382 | INFO     | . Timing measurements:
[2025-11-25 11:24:24] 2025-11-25 16:23:25,382 | INFO     | . get job = 0 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,382 | INFO     | . initial setup = 5 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,382 | INFO     | . payload setup = 39 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,383 | INFO     | . stage-in = 0 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,383 | INFO     | . payload execution = 99694 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,383 | INFO     | . stage-out = 11 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,383 | INFO     | . log creation = 3 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,383 | INFO     | ..............................
[2025-11-25 11:24:24] 2025-11-25 16:23:25,495 | INFO     | time since job start (99849s) is within the limit (172800.0s)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | 
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | job summary report
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | --------------------------------------------------
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | PanDA job id: 6891558275
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | task id: 47493068
[2025-11-25 11:24:24] 2025-11-25 16:23:25,591 | INFO     | errors: (none)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | pilot state: finished 
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | transexitcode: 0
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | exeerrorcode: 0
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | exeerrordiag: 
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | exitcode: 0
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | exitmsg: OK
[2025-11-25 11:24:24] 2025-11-25 16:23:25,592 | INFO     | cpuconsumptiontime: 329495 s
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | nevents: 1000
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | neventsw: 0
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | pid: 3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | pgrp: 3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | corecount: 8
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | event service: False
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | sizes: {0: 2284124, 1: 2284323, 2: 2284351, 13: 2284351, 23: 2284407, 27: 2284697, 34: 2284853, 99737: 2354478, 99738: 2354477, 99750: 2363532, 99752: 2363588, 997
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | --------------------------------------------------
[2025-11-25 11:24:24] 2025-11-25 16:23:25,593 | INFO     | 
[2025-11-25 11:24:24] 2025-11-25 16:23:25,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 11:24:24] 2025-11-25 16:23:25,774 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | job 6891558275 has completed (purged errors)
[2025-11-25 11:24:24] 2025-11-25 16:23:25,777 | INFO     | overall cleanup function is called
[2025-11-25 11:24:24] 2025-11-25 16:23:26,810 | INFO     | --- collectZombieJob: --- 10, [3982680]
[2025-11-25 11:24:24] 2025-11-25 16:23:26,810 | INFO     | zombie collector waiting for pid 3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:26,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:24:24] 2025-11-25 16:23:26,811 | INFO     | collected zombie processes
[2025-11-25 11:24:24] 2025-11-25 16:23:26,811 | INFO     | will attempt to kill all subprocesses of pid=3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:29,371 | INFO     | process IDs to be killed: [3982680] (in reverse order)
[2025-11-25 11:24:24] 2025-11-25 16:23:30,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:24:24] 2025-11-25 16:23:30,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:24:24] 2025-11-25 16:23:30,250 | INFO     | did not find any defunct processes belonging to 3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:30,268 | INFO     | did not find any defunct processes belonging to 3982680
[2025-11-25 11:24:24] 2025-11-25 16:23:30,270 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:24:24] 2025-11-25 16:23:30,270 | INFO     | ready for new job
[2025-11-25 11:24:24] 2025-11-25 16:23:30,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:24:24] 2025-11-25 16:23:30,276 | INFO     | ***************************************
[2025-11-25 11:24:24] 2025-11-25 16:23:30,276 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:24:24] 2025-11-25 16:23:30,276 | INFO     | ***************************************
[2025-11-25 11:24:24] 2025-11-25 16:23:30,276 | INFO     | 
[2025-11-25 11:24:24] 2025-11-25 16:23:30,279 | INFO     | architecture information:
[2025-11-25 11:24:24] 2025-11-25 16:23:30,279 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:24:24] 2025-11-25 16:23:30,376 | INFO     | cat /etc/os-release:
[2025-11-25 11:24:24] NAME="CentOS Linux"
[2025-11-25 11:24:24] VERSION="7 (Core)"
[2025-11-25 11:24:24] ID="centos"
[2025-11-25 11:24:24] ID_LIKE="rhel fedora"
[2025-11-25 11:24:24] VERSION_ID="7"
[2025-11-25 11:24:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:24:24] ANSI_COLOR="0;31"
[2025-11-25 11:24:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:24:24] HOME_URL="https://www.centos.org/"
[2025-11-25 11:24:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:24:24] 
[2025-11-25 11:24:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:24:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:24:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:24:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:24:24] 
[2025-11-25 11:24:24] 2025-11-25 16:23:30,376 | INFO     | ***************************************
[2025-11-25 11:24:24] 2025-11-25 16:23:30,878 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 11:24:24] 2025-11-25 16:23:30,959 | INFO     | sufficient remaining disk space (58867056640 B)
[2025-11-25 11:24:24] 2025-11-25 16:23:30,960 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:24:24] 2025-11-25 16:23:30,960 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:24:24] 2025-11-25 16:23:30,960 | INFO     | update_server=False
[2025-11-25 11:24:24] 2025-11-25 16:23:30,960 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:24:24] 2025-11-25 16:23:30,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:24:24] 2025-11-25 16:23:30,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:24:24] 2025-11-25 16:23:30,961 | INFO     | aborting loop
[2025-11-25 11:24:24] 2025-11-25 16:23:30,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:24:24] 2025-11-25 16:23:31,148 | INFO     | all data control threads have been joined
[2025-11-25 11:24:24] 2025-11-25 16:23:31,254 | INFO     | all payload control threads have been joined
[2025-11-25 11:24:24] 2025-11-25 16:23:31,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:24:24] 2025-11-25 16:23:31,966 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:31,967 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:31,967 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,159 | INFO     | [data] control thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,259 | INFO     | [payload] control thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,546 | INFO     | all job control threads have been joined
[2025-11-25 11:24:24] 2025-11-25 16:23:32,549 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,581 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,612 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,952 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:32,968 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:33,267 | INFO     | [job] validate thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:33,441 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:33,453 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:33,579 | INFO     | [job] control thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:23:35,958 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:24:24] 2025-11-25 16:24:00,843 | INFO     | PID=3972130 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 11:24:24] 2025-11-25 16:24:00,849 | INFO     | .. there are 52 such processes running
[2025-11-25 11:24:24] 2025-11-25 16:24:00,850 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:24:24] 2025-11-25 16:24:00,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:24:24] 2025-11-25 16:24:00,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:24:24] 2025-11-25 16:24:15,287 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:24:24] 2025-11-25 16:24:15,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214901692224)>', '<ExcThread(monitor, started 140214039213824)>']
[2025-11-25 11:24:24] 2025-11-25 16:24:16,020 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:24:24] 2025-11-25 16:24:16,020 | INFO     | [monitor] control thread has ended
[2025-11-25 11:24:24] 2025-11-25 16:24:20,474 | INFO     | all workflow threads have been joined
[2025-11-25 11:24:24] 2025-11-25 16:24:20,474 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:24:24] 2025-11-25 16:24:20,475 | INFO     | traces error code: 0
[2025-11-25 11:24:24] 2025-11-25 16:24:20,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:24:24] 2025-11-25 16:24:21,570 [wrapper] supervise_pilot (15 min periods counter: 112)
[2025-11-25 11:24:24] 2025-11-25 16:24:22,257 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:24:24] 2025-11-25 16:24:22,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:24:24] 2025-11-25 16:24:22,311 [wrapper] pilotpid: 3972130
[2025-11-25 11:24:24] 2025-11-25 16:24:22,314 [wrapper] Pilot exit status: 0
[2025-11-25 11:24:24] 2025-11-25 16:24:22,468 [wrapper] pandaids: 6891558275
[2025-11-25 11:24:24] 2025-11-25 16:24:22,829 [wrapper] cleanup supervisor_pilot 1717103 3972131
[2025-11-25 11:24:24] 2025-11-25 16:24:22,833 [wrapper] Test setup, not cleaning
[2025-11-25 11:24:24] 2025-11-25 16:24:22,836 [wrapper] apfmon messages muted
[2025-11-25 11:24:24] 2025-11-25 16:24:22,839 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:24:24] 2025-11-25 16:24:22,842 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:24:24]  *** Error codes and diagnostics ***
[2025-11-25 11:24:24]     "exeErrorCode": 0,
[2025-11-25 11:24:24]     "exeErrorDiag": "",
[2025-11-25 11:24:24]     "pilotErrorCode": 0,
[2025-11-25 11:24:24]     "pilotErrorDiag": "",
[2025-11-25 11:24:24]  *** Listing of results directory ***
[2025-11-25 11:24:24] total 1325508
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:23 queuedata.json
[2025-11-25 11:24:24] -rwx------. 1 boincer umatlas     36292 Nov 18 10:23 runpilot2-wrapper.sh
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas       100 Nov 24 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:24:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 07:38 run_atlas
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas       105 Nov 24 07:38 job.xml
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas 409034231 Nov 24 07:38 EVNT.47493065._000048.pool.root.1
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 07:38 start_atlas.sh
[2025-11-25 11:24:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 07:38 shared
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 07:38 input.tar.gz
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas         0 Nov 24 07:38 boinc_lockfile
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas      2771 Nov 24 07:38 pandaJob.out
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas    988279 Nov 24 07:39 agis_schedconf.cvmfs.json
[2025-11-25 11:24:24] drwx------. 5 boincer umatlas      4096 Nov 24 07:39 pilot3
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas       533 Nov 25 10:52 boinc_task_state.xml
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas      6615 Nov 25 11:18 init_data.xml
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas 914982121 Nov 25 11:21 HITS.47493068._000477.pool.root.1
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas      1077 Nov 25 11:22 memory_monitor_summary.json
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas   1516240 Nov 25 11:22 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas   2588617 Nov 25 11:22 log.47493068._000477.job.log.tgz.1
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas      8659 Nov 25 11:23 heartbeat.json
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas        95 Nov 25 11:24 pilot_heartbeat.json
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas      4824 Nov 25 11:24 pilotlog.txt
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 11:24 boinc_mmap_file
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas        29 Nov 25 11:24 wrapper_checkpoint.txt
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas  12111710 Nov 25 11:24 log.47493068._000477.job.log.1
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas       353 Nov 25 11:24 output.list
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas       620 Nov 25 11:24 runtime_log
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas  14714880 Nov 25 11:24 result.tar.gz
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas      8699 Nov 25 11:24 runtime_log.err
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas       663 Nov 25 11:24 MOoLDmVjcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7JFKDmQgYJTo.diag
[2025-11-25 11:24:24] -rw-r--r--. 1 boincer umatlas     21794 Nov 25 11:24 stderr.txt
[2025-11-25 11:24:24] HITS file was successfully produced:
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas 914982121 Nov 25 11:21 shared/HITS.pool.root.1
[2025-11-25 11:24:24]  *** Contents of shared directory: ***
[2025-11-25 11:24:24] total 1307960
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas 409034231 Nov 24 07:38 ATLAS.root_0
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 07:38 start_atlas.sh
[2025-11-25 11:24:24] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 07:38 input.tar.gz
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas 914982121 Nov 25 11:21 HITS.pool.root.1
[2025-11-25 11:24:24] -rw-------. 1 boincer umatlas  14714880 Nov 25 11:24 result.tar.gz
11:24:26 (3967789): run_atlas exited; CPU time 334614.296296
11:24:26 (3967789): called boinc_finish(0)

</stderr_txt>
]]>

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