Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:36 (1782967): wrapper (7.7.26015): starting
00:11:36 (1782967): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:11:36] Arguments: --nthreads 8
[2025-11-24 00:11:36] Threads: 8
[2025-11-24 00:11:36] Checking for CVMFS
[2025-11-24 00:11:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:11:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:11:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:11:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:11:39] 2.13.2.0 6051 31090 209992 153234 3 90 38341532 40960000 11509 16776704 0 33192869 99.778 17403565 37450 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:11:39] CVMFS is ok
[2025-11-24 00:11:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:11:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:11:39] Further information can be found at the LHC@home message board.
[2025-11-24 00:11:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:11:39] Checking for apptainer binary...
[2025-11-24 00:11:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:11:39] Running /usr/bin/apptainer --version
[2025-11-24 00:11:39] apptainer version 1.4.4-1.el9
[2025-11-24 00:11:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:11:39] c-210-37-3.aglt2.org
[2025-11-24 00:11:39] apptainer works
[2025-11-24 00:11:39] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:11:39] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:11:40] Starting ATLAS job with PandaID=6895350491
[2025-11-24 00:11:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:38:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:38:42] 2025-11-24 23:37:57,788 | INFO     | time since job start (66324s) is within the limit (172800.0s)
[2025-11-24 18:38:42] 2025-11-24 23:37:58,715 | INFO     | monitor loop #4438: job 0:6895350491 is in state 'finished'
[2025-11-24 18:38:42] 2025-11-24 23:37:58,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:38:42] 2025-11-24 23:37:59,797 | INFO     | time since job start (66326s) is within the limit (172800.0s)
[2025-11-24 18:38:42] 2025-11-24 23:38:01,235 | INFO     | monitor loop #4439: job 0:6895350491 is in state 'finished'
[2025-11-24 18:38:42] 2025-11-24 23:38:01,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:38:42] 2025-11-24 23:38:01,725 | INFO     | PID=1786820 has CPU usage=13.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 18:38:42] 2025-11-24 23:38:01,725 | INFO     | .. there are 11 such processes running
[2025-11-24 18:38:42] 2025-11-24 23:38:02,726 | INFO     | time since job start (66329s) is within the limit (172800.0s)
[2025-11-24 18:38:42] 2025-11-24 23:38:03,748 | INFO     | monitor loop #4440: job 0:6895350491 is in state 'finished'
[2025-11-24 18:38:42] 2025-11-24 23:38:03,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:38:42] 2025-11-24 23:38:04,733 | INFO     | time since job start (66331s) is within the limit (172800.0s)
[2025-11-24 18:38:42] 2025-11-24 23:38:06,254 | INFO     | monitor loop #4441: job 0:6895350491 is in state 'finished'
[2025-11-24 18:38:42] 2025-11-24 23:38:06,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:38:42] 2025-11-24 23:38:06,740 | INFO     | time since job start (66333s) is within the limit (172800.0s)
[2025-11-24 18:38:42] 2025-11-24 23:38:07,916 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 18:38:42] 2025-11-24 23:38:07,953 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2870.468553571428
[2025-11-24 18:38:42] 2025-11-24 23:38:07,993 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895350491/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:38:42] 2025-11-24 23:38:07,993 | INFO     | extracted standard info from prmon json
[2025-11-24 18:38:42] 2025-11-24 23:38:07,994 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:38:42] 2025-11-24 23:38:07,994 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:38:42] 2025-11-24 23:38:08,125 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:38:42] 2025-11-24 23:38:08,127 | INFO     | sum of square deviations: 396027778524.7407
[2025-11-24 18:38:42] 2025-11-24 23:38:08,201 | INFO     | sum of deviations: 3790453677070.4595
[2025-11-24 18:38:42] 2025-11-24 23:38:08,202 | INFO     | mean x: 1763994362.1926267
[2025-11-24 18:38:42] 2025-11-24 23:38:08,202 | INFO     | mean y: 2877136.332718894
[2025-11-24 18:38:42] 2025-11-24 23:38:08,202 | INFO     | intersect: -16880632756.362577
[2025-11-24 18:38:42] 2025-11-24 23:38:08,211 | INFO     | chi2: 18.32143585178622
[2025-11-24 18:38:42] 2025-11-24 23:38:08,213 | INFO     | sum of square deviations: 390578463033.53973
[2025-11-24 18:38:42] 2025-11-24 23:38:08,273 | INFO     | sum of deviations: 4170705569795.8037
[2025-11-24 18:38:42] 2025-11-24 23:38:08,273 | INFO     | mean x: 1763994209.7074075
[2025-11-24 18:38:42] 2025-11-24 23:38:08,273 | INFO     | mean y: 2887776.762037037
[2025-11-24 18:38:42] 2025-11-24 23:38:08,273 | INFO     | intersect: -18833533510.712955
[2025-11-24 18:38:42] 2025-11-24 23:38:08,274 | INFO     | chi2: 14.919697288949175
[2025-11-24 18:38:42] 2025-11-24 23:38:08,274 | INFO     | current chi2=14.919697288949175 (change=18.566986727218747 %)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,275 | INFO     | right removable region: 1079
[2025-11-24 18:38:42] 2025-11-24 23:38:08,284 | INFO     | sum of square deviations: 390576349993.54034
[2025-11-24 18:38:42] 2025-11-24 23:38:08,354 | INFO     | sum of deviations: 3370663750820.3374
[2025-11-24 18:38:42] 2025-11-24 23:38:08,354 | INFO     | mean x: 1763994514.7074075
[2025-11-24 18:38:42] 2025-11-24 23:38:08,354 | INFO     | mean y: 2888878.2194444444
[2025-11-24 18:38:42] 2025-11-24 23:38:08,354 | INFO     | intersect: -15220337944.061289
[2025-11-24 18:38:42] 2025-11-24 23:38:08,356 | INFO     | chi2: 14.349942474901907
[2025-11-24 18:38:42] 2025-11-24 23:38:08,356 | INFO     | current chi2=14.349942474901907 (change=21.676758355689238 %)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,356 | INFO     | left removable region: 10
[2025-11-24 18:38:42] 2025-11-24 23:38:08,357 | INFO     | sum of square deviations: 378762237343.2145
[2025-11-24 18:38:42] 2025-11-24 23:38:08,376 | INFO     | sum of deviations: 3427271298434.096
[2025-11-24 18:38:42] 2025-11-24 23:38:08,376 | INFO     | mean x: 1763994484.2404115
[2025-11-24 18:38:42] 2025-11-24 23:38:08,376 | INFO     | mean y: 2913206.59494855
[2025-11-24 18:38:42] 2025-11-24 23:38:08,376 | INFO     | intersect: -15958782734.478855
[2025-11-24 18:38:42] 2025-11-24 23:38:08,377 | INFO     | chi2: 6.723927789656562
[2025-11-24 18:38:42] 2025-11-24 23:38:08,378 | INFO     | current memory leak: 9.05 B/s (using 1069 data points, chi2=6.72)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | could have reported an average CPU frequency of 2778 MHz (40 samples)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | ..............................
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . Timing measurements:
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . get job = 0 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . initial setup = 4 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . payload setup = 48 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . stage-in = 0 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . payload execution = 66193 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . stage-out = 4 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,379 | INFO     | . log creation = 1 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,380 | INFO     | ..............................
[2025-11-24 18:38:42] 2025-11-24 23:38:08,533 | INFO     | 
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | job summary report
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | --------------------------------------------------
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | PanDA job id: 6895350491
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | task id: 47556137
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | errors: (none)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | pilot state: finished 
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | transexitcode: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | exeerrorcode: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | exeerrordiag: 
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | exitcode: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | exitmsg: OK
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | cpuconsumptiontime: 232973 s
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | nevents: 1000
[2025-11-24 18:38:42] 2025-11-24 23:38:08,534 | INFO     | neventsw: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | pid: 1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | pgrp: 1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | corecount: 8
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | event service: False
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | sizes: {0: 2298528, 1: 2298783, 2: 2298783, 13: 2298811, 24: 2298867, 30: 2299157, 35: 2299313, 66246: 2356157, 66247: 2356156, 66252: 2365997, 66255: 2366053, 662
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | --------------------------------------------------
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | 
[2025-11-24 18:38:42] 2025-11-24 23:38:08,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 18:38:42] 2025-11-24 23:38:08,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | job 6895350491 has completed (purged errors)
[2025-11-24 18:38:42] 2025-11-24 23:38:08,585 | INFO     | overall cleanup function is called
[2025-11-24 18:38:42] 2025-11-24 23:38:09,616 | INFO     | --- collectZombieJob: --- 10, [1794700]
[2025-11-24 18:38:42] 2025-11-24 23:38:09,616 | INFO     | zombie collector waiting for pid 1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:09,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:38:42] 2025-11-24 23:38:09,616 | INFO     | collected zombie processes
[2025-11-24 18:38:42] 2025-11-24 23:38:09,616 | INFO     | will attempt to kill all subprocesses of pid=1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:10,306 | INFO     | process IDs to be killed: [1794700] (in reverse order)
[2025-11-24 18:38:42] 2025-11-24 23:38:10,438 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:38:42] 2025-11-24 23:38:10,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:38:42] 2025-11-24 23:38:10,457 | INFO     | did not find any defunct processes belonging to 1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:10,474 | INFO     | did not find any defunct processes belonging to 1794700
[2025-11-24 18:38:42] 2025-11-24 23:38:10,479 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:38:42] 2025-11-24 23:38:10,479 | INFO     | ready for new job
[2025-11-24 18:38:42] 2025-11-24 23:38:10,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:38:42] 2025-11-24 23:38:10,489 | INFO     | ***************************************
[2025-11-24 18:38:42] 2025-11-24 23:38:10,489 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:38:42] 2025-11-24 23:38:10,489 | INFO     | ***************************************
[2025-11-24 18:38:42] 2025-11-24 23:38:10,489 | INFO     | 
[2025-11-24 18:38:42] 2025-11-24 23:38:10,496 | INFO     | architecture information:
[2025-11-24 18:38:42] 2025-11-24 23:38:10,500 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:38:42] 2025-11-24 23:38:10,557 | INFO     | cat /etc/os-release:
[2025-11-24 18:38:42] NAME="CentOS Linux"
[2025-11-24 18:38:42] VERSION="7 (Core)"
[2025-11-24 18:38:42] ID="centos"
[2025-11-24 18:38:42] ID_LIKE="rhel fedora"
[2025-11-24 18:38:42] VERSION_ID="7"
[2025-11-24 18:38:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:38:42] ANSI_COLOR="0;31"
[2025-11-24 18:38:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:38:42] HOME_URL="https://www.centos.org/"
[2025-11-24 18:38:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:38:42] 
[2025-11-24 18:38:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:38:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:38:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:38:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:38:42] 
[2025-11-24 18:38:42] 2025-11-24 23:38:10,558 | INFO     | ***************************************
[2025-11-24 18:38:42] 2025-11-24 23:38:11,061 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 18:38:42] 2025-11-24 23:38:11,146 | INFO     | sufficient remaining disk space (70641516544 B)
[2025-11-24 18:38:42] 2025-11-24 23:38:11,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:38:42] 2025-11-24 23:38:11,146 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:38:42] 2025-11-24 23:38:11,146 | INFO     | update_server=False
[2025-11-24 18:38:42] 2025-11-24 23:38:11,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:38:42] 2025-11-24 23:38:11,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:38:42] 2025-11-24 23:38:11,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:38:42] 2025-11-24 23:38:11,285 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 18:38:42] 2025-11-24 23:38:11,285 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 18:38:42] 2025-11-24 23:38:11,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:38:42] 2025-11-24 23:38:11,285 | INFO     | will abort loop
[2025-11-24 18:38:42] 2025-11-24 23:38:11,304 | INFO     | all data control threads have been joined
[2025-11-24 18:38:42] 2025-11-24 23:38:11,311 | INFO     | all job control threads have been joined
[2025-11-24 18:38:42] 2025-11-24 23:38:12,043 | INFO     | all payload control threads have been joined
[2025-11-24 18:38:42] 2025-11-24 23:38:12,152 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,291 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,312 | INFO     | [data] control thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,317 | INFO     | [job] control thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,467 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,630 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,719 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:12,729 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,031 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,050 | INFO     | [payload] control thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,154 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,442 | INFO     | [job] validate thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:38:42] 2025-11-24 23:38:13,561 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:13,564 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:14,496 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:15,160 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:38:42] 2025-11-24 23:38:28,599 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:38:42] 2025-11-24 23:38:29,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600802158400)>', '<ExcThread(monitor, started 140600158439168)>']
[2025-11-24 18:38:42] 2025-11-24 23:38:34,632 | INFO     | all workflow threads have been joined
[2025-11-24 18:38:42] 2025-11-24 23:38:34,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:38:42] 2025-11-24 23:38:34,633 | INFO     | traces error code: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:34,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:38:42] 2025-11-24 23:38:40,776 | INFO     | PID=1786820 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:38:42] 2025-11-24 23:38:40,776 | INFO     | .. there are 11 such processes running
[2025-11-24 18:38:42] 2025-11-24 23:38:40,776 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:38:42] 2025-11-24 23:38:40,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:38:42] 2025-11-24 23:38:40,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:38:42] 2025-11-24 23:38:40,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:38:42] 2025-11-24 23:38:40,777 | INFO     | [monitor] control thread has ended
[2025-11-24 18:38:42] 2025-11-24 23:38:41,439 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:38:42] 2025-11-24 23:38:41,453 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:38:42] 2025-11-24 23:38:41,470 [wrapper] pilotpid: 1786820
[2025-11-24 18:38:42] 2025-11-24 23:38:41,494 [wrapper] Pilot exit status: 0
[2025-11-24 18:38:42] 2025-11-24 23:38:41,568 [wrapper] pandaids: 6895350491
[2025-11-24 18:38:42] 2025-11-24 23:38:41,912 [wrapper] cleanup supervisor_pilot 3233198 1786821
[2025-11-24 18:38:42] 2025-11-24 23:38:41,940 [wrapper] Test setup, not cleaning
[2025-11-24 18:38:42] 2025-11-24 23:38:41,959 [wrapper] apfmon messages muted
[2025-11-24 18:38:42] 2025-11-24 23:38:42,012 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:38:42] 2025-11-24 23:38:42,046 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:38:42]  *** Error codes and diagnostics ***
[2025-11-24 18:38:42]     "exeErrorCode": 0,
[2025-11-24 18:38:42]     "exeErrorDiag": "",
[2025-11-24 18:38:42]     "pilotErrorCode": 0,
[2025-11-24 18:38:42]     "pilotErrorDiag": "",
[2025-11-24 18:38:42]  *** Listing of results directory ***
[2025-11-24 18:38:42] total 1322636
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:27 pilot3.tar.gz
[2025-11-24 18:38:42] -rwx------. 1 boincer umatlas     36292 Nov 22 16:30 runpilot2-wrapper.sh
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:30 queuedata.json
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:38:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:11 run_atlas
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:11 job.xml
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas 409701484 Nov 24 00:11 EVNT.47483658._000514.pool.root.1
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-24 18:38:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:11 shared
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:11 input.tar.gz
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:11 boinc_lockfile
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:11 pandaJob.out
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas        57 Nov 24 00:11 setup.sh.local
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas    989786 Nov 24 00:12 agis_schedconf.cvmfs.json
[2025-11-24 18:38:42] drwx------. 5 boincer umatlas      4096 Nov 24 00:12 pilot3
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas       533 Nov 24 18:21 boinc_task_state.xml
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas 918174402 Nov 24 18:36 HITS.47556137._005097.pool.root.1
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas      1070 Nov 24 18:37 memory_monitor_summary.json
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:37 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas   2272171 Nov 24 18:37 log.47556137._005097.job.log.tgz.1
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas        95 Nov 24 18:37 pilot_heartbeat.json
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas      6843 Nov 24 18:38 init_data.xml
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas      8619 Nov 24 18:38 heartbeat.json
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas        29 Nov 24 18:38 wrapper_checkpoint.txt
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 18:38 boinc_mmap_file
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas       823 Nov 24 18:38 pilotlog.txt
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas   9021287 Nov 24 18:38 log.47556137._005097.job.log.1
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas       353 Nov 24 18:38 output.list
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:38 runtime_log
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas  11315200 Nov 24 18:38 result.tar.gz
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas      9353 Nov 24 18:38 runtime_log.err
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas       662 Nov 24 18:38 Ky1NDmMMAh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2IIKDmn6hB0m.diag
[2025-11-24 18:38:42] -rw-r--r--. 1 boincer umatlas     21872 Nov 24 18:38 stderr.txt
[2025-11-24 18:38:42] HITS file was successfully produced:
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas 918174402 Nov 24 18:36 shared/HITS.pool.root.1
[2025-11-24 18:38:42]  *** Contents of shared directory: ***
[2025-11-24 18:38:42] total 1308412
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas 409701484 Nov 24 00:11 ATLAS.root_0
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-24 18:38:42] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:11 input.tar.gz
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas 918174402 Nov 24 18:36 HITS.pool.root.1
[2025-11-24 18:38:42] -rw-------. 1 boincer umatlas  11315200 Nov 24 18:38 result.tar.gz
18:38:44 (1782967): run_atlas exited; CPU time 233508.253577
18:38:44 (1782967): called boinc_finish(0)

</stderr_txt>
]]>

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