Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:51 (3382625): wrapper (7.7.26015): starting
00:02:51 (3382625): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:02:51] Arguments: --nthreads 8
[2025-11-24 00:02:51] Threads: 8
[2025-11-24 00:02:51] Checking for CVMFS
[2025-11-24 00:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:52] 2.13.2.0 6529 30441 465548 153233 1 320 23337201 40960000 20109 16776704 0 60994862 99.577 67018424 39483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:02:52] CVMFS is ok
[2025-11-24 00:02:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:52] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:52] Checking for apptainer binary...
[2025-11-24 00:02:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:52] Running /usr/bin/apptainer --version
[2025-11-24 00:02:52] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:53] c-206-36.aglt2.org
[2025-11-24 00:02:53] apptainer works
[2025-11-24 00:02:53] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:02:53] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:02:53] Starting ATLAS job with PandaID=6891584305
[2025-11-24 00:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:42:19]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:42:19] 2025-11-25 04:41:27,518 | INFO     | monitor loop #5336: job 0:6891584305 is in state 'finished'
[2025-11-24 23:42:19] 2025-11-25 04:41:27,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:42:19] 2025-11-25 04:41:28,094 | INFO     | time since job start (85070s) is within the limit (172800.0s)
[2025-11-24 23:42:19] 2025-11-25 04:41:28,974 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:42:19] 2025-11-25 04:41:28,978 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3261.371359375
[2025-11-24 23:42:19] 2025-11-25 04:41:28,989 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6891584305/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:42:19] 2025-11-25 04:41:28,989 | INFO     | extracted standard info from prmon json
[2025-11-24 23:42:19] 2025-11-25 04:41:28,989 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:42:19] 2025-11-25 04:41:28,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:42:19] 2025-11-25 04:41:29,007 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:42:19] 2025-11-25 04:41:29,009 | INFO     | sum of square deviations: 838189416155.0957
[2025-11-24 23:42:19] 2025-11-25 04:41:29,046 | INFO     | sum of deviations: 6323954707346.228
[2025-11-24 23:42:19] 2025-11-25 04:41:29,046 | INFO     | mean x: 1764003182.3366835
[2025-11-24 23:42:19] 2025-11-25 04:41:29,046 | INFO     | mean y: 2873532.737257717
[2025-11-24 23:42:19] 2025-11-25 04:41:29,047 | INFO     | intersect: -13306142321.797972
[2025-11-24 23:42:19] 2025-11-25 04:41:29,048 | INFO     | chi2: 8.260261474404968
[2025-11-24 23:42:19] 2025-11-25 04:41:29,049 | INFO     | sum of square deviations: 829196829391.129
[2025-11-24 23:42:19] 2025-11-25 04:41:29,085 | INFO     | sum of deviations: 6766563783698.917
[2025-11-24 23:42:19] 2025-11-25 04:41:29,085 | INFO     | mean x: 1764003029.8414986
[2025-11-24 23:42:19] 2025-11-25 04:41:29,085 | INFO     | mean y: 2881035.3904899135
[2025-11-24 23:42:19] 2025-11-25 04:41:29,085 | INFO     | intersect: -14392059457.59874
[2025-11-24 23:42:19] 2025-11-25 04:41:29,086 | INFO     | chi2: 5.254074551342143
[2025-11-24 23:42:19] 2025-11-25 04:41:29,086 | INFO     | current chi2=5.254074551342143 (change=36.393362757071536 %)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,088 | INFO     | sum of square deviations: 820268717432.7906
[2025-11-24 23:42:19] 2025-11-25 04:41:29,129 | INFO     | sum of deviations: 6830185101121.882
[2025-11-24 23:42:19] 2025-11-25 04:41:29,129 | INFO     | mean x: 1764002877.3456254
[2025-11-24 23:42:19] 2025-11-25 04:41:29,129 | INFO     | mean y: 2882119.0065075923
[2025-11-24 23:42:19] 2025-11-25 04:41:29,129 | INFO     | intersect: -14685555846.652496
[2025-11-24 23:42:19] 2025-11-25 04:41:29,130 | INFO     | chi2: 4.969189101051061
[2025-11-24 23:42:19] 2025-11-25 04:41:29,130 | INFO     | current chi2=4.969189101051061 (change=5.422181347204303 %)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,130 | INFO     | right removable region: 1382
[2025-11-24 23:42:19] 2025-11-25 04:41:29,132 | INFO     | sum of square deviations: 829195693571.1296
[2025-11-24 23:42:19] 2025-11-25 04:41:29,170 | INFO     | sum of deviations: 5789507864982.019
[2025-11-24 23:42:19] 2025-11-25 04:41:29,170 | INFO     | mean x: 1764003334.8414986
[2025-11-24 23:42:19] 2025-11-25 04:41:29,170 | INFO     | mean y: 2882593.704610951
[2025-11-24 23:42:19] 2025-11-25 04:41:29,170 | INFO     | intersect: -12313523847.018545
[2025-11-24 23:42:19] 2025-11-25 04:41:29,171 | INFO     | chi2: 4.516782703382505
[2025-11-24 23:42:19] 2025-11-25 04:41:29,171 | INFO     | current chi2=4.516782703382505 (change=45.319131635504625 %)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,173 | INFO     | sum of square deviations: 820267122522.9116
[2025-11-24 23:42:19] 2025-11-25 04:41:29,208 | INFO     | sum of deviations: 5574970714037.619
[2025-11-24 23:42:19] 2025-11-25 04:41:29,208 | INFO     | mean x: 1764003487.3412871
[2025-11-24 23:42:19] 2025-11-25 04:41:29,208 | INFO     | mean y: 2886254.3376717283
[2025-11-24 23:42:19] 2025-11-25 04:41:29,209 | INFO     | intersect: -11986217674.563509
[2025-11-24 23:42:19] 2025-11-25 04:41:29,210 | INFO     | chi2: 3.9246617285966714
[2025-11-24 23:42:19] 2025-11-25 04:41:29,210 | INFO     | current chi2=3.9246617285966714 (change=13.109352689081307 %)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,210 | INFO     | left removable region: 20
[2025-11-24 23:42:19] 2025-11-25 04:41:29,211 | INFO     | sum of square deviations: 783468048723.4446
[2025-11-24 23:42:19] 2025-11-25 04:41:29,246 | INFO     | sum of deviations: 5836730692987.974
[2025-11-24 23:42:19] 2025-11-25 04:41:29,246 | INFO     | mean x: 1764003456.8502202
[2025-11-24 23:42:19] 2025-11-25 04:41:29,246 | INFO     | mean y: 2898975.906754772
[2025-11-24 23:42:19] 2025-11-25 04:41:29,246 | INFO     | intersect: -13138687507.307882
[2025-11-24 23:42:19] 2025-11-25 04:41:29,248 | INFO     | chi2: 0.512478104971945
[2025-11-24 23:42:19] 2025-11-25 04:41:29,248 | INFO     | current memory leak: 7.45 B/s (using 1362 data points, chi2=0.51)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | could have reported an average CPU frequency of 3217 MHz (50 samples)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | ..............................
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . Timing measurements:
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . get job = 0 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . initial setup = 5 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . payload setup = 36 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . stage-in = 0 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . payload execution = 84961 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . stage-out = 3 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | . log creation = 0 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,249 | INFO     | ..............................
[2025-11-24 23:42:19] 2025-11-25 04:41:29,324 | INFO     | 
[2025-11-24 23:42:19] 2025-11-25 04:41:29,324 | INFO     | job summary report
[2025-11-24 23:42:19] 2025-11-25 04:41:29,324 | INFO     | --------------------------------------------------
[2025-11-24 23:42:19] 2025-11-25 04:41:29,324 | INFO     | PanDA job id: 6891584305
[2025-11-24 23:42:19] 2025-11-25 04:41:29,324 | INFO     | task id: 47493068
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | errors: (none)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | pilot state: finished 
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | transexitcode: 0
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | exeerrorcode: 0
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | exeerrordiag: 
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | exitcode: 0
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | exitmsg: OK
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | cpuconsumptiontime: 199705 s
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | nevents: 1000
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | neventsw: 0
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | pid: 3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | pgrp: 3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | corecount: 8
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | event service: False
[2025-11-24 23:42:19] 2025-11-25 04:41:29,325 | INFO     | sizes: {0: 2298625, 1: 2298824, 12: 2298824, 23: 2298852, 26: 2299142, 34: 2299170, 85001: 2363802, 85006: 2373587, 85009: 2373643, 85022: 2373889}
[2025-11-24 23:42:19] 2025-11-25 04:41:29,326 | INFO     | --------------------------------------------------
[2025-11-24 23:42:19] 2025-11-25 04:41:29,326 | INFO     | 
[2025-11-24 23:42:19] 2025-11-25 04:41:29,326 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 23:42:19] 2025-11-25 04:41:29,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | job 6891584305 has completed (purged errors)
[2025-11-24 23:42:19] 2025-11-25 04:41:29,349 | INFO     | overall cleanup function is called
[2025-11-24 23:42:19] 2025-11-25 04:41:30,367 | INFO     | --- collectZombieJob: --- 10, [3405417]
[2025-11-24 23:42:19] 2025-11-25 04:41:30,367 | INFO     | zombie collector waiting for pid 3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:30,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:42:19] 2025-11-25 04:41:30,367 | INFO     | collected zombie processes
[2025-11-24 23:42:19] 2025-11-25 04:41:30,367 | INFO     | will attempt to kill all subprocesses of pid=3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:30,710 | INFO     | process IDs to be killed: [3405417] (in reverse order)
[2025-11-24 23:42:19] 2025-11-25 04:41:30,865 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:42:19] 2025-11-25 04:41:30,866 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:42:19] 2025-11-25 04:41:30,878 | INFO     | did not find any defunct processes belonging to 3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:30,890 | INFO     | did not find any defunct processes belonging to 3405417
[2025-11-24 23:42:19] 2025-11-25 04:41:30,892 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:42:19] 2025-11-25 04:41:30,892 | INFO     | ready for new job
[2025-11-24 23:42:19] 2025-11-25 04:41:30,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:42:19] 2025-11-25 04:41:30,898 | INFO     | ***************************************
[2025-11-24 23:42:19] 2025-11-25 04:41:30,899 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:42:19] 2025-11-25 04:41:30,899 | INFO     | ***************************************
[2025-11-24 23:42:19] 2025-11-25 04:41:30,899 | INFO     | 
[2025-11-24 23:42:19] 2025-11-25 04:41:30,902 | INFO     | architecture information:
[2025-11-24 23:42:19] 2025-11-25 04:41:30,908 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:42:19] 2025-11-25 04:41:30,961 | INFO     | cat /etc/os-release:
[2025-11-24 23:42:19] NAME="CentOS Linux"
[2025-11-24 23:42:19] VERSION="7 (Core)"
[2025-11-24 23:42:19] ID="centos"
[2025-11-24 23:42:19] ID_LIKE="rhel fedora"
[2025-11-24 23:42:19] VERSION_ID="7"
[2025-11-24 23:42:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:42:19] ANSI_COLOR="0;31"
[2025-11-24 23:42:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:42:19] HOME_URL="https://www.centos.org/"
[2025-11-24 23:42:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:42:19] 
[2025-11-24 23:42:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:42:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:42:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:42:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:42:19] 
[2025-11-24 23:42:19] 2025-11-25 04:41:30,961 | INFO     | ***************************************
[2025-11-24 23:42:19] 2025-11-25 04:41:31,465 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 23:42:19] 2025-11-25 04:41:31,513 | INFO     | sufficient remaining disk space (80825286656 B)
[2025-11-24 23:42:19] 2025-11-25 04:41:31,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:42:19] 2025-11-25 04:41:31,514 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:42:19] 2025-11-25 04:41:31,514 | INFO     | update_server=False
[2025-11-24 23:42:19] 2025-11-25 04:41:31,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:42:19] 2025-11-25 04:41:31,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:42:19] 2025-11-25 04:41:31,516 | INFO     | aborting loop
[2025-11-24 23:42:19] 2025-11-25 04:41:31,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:42:19] 2025-11-25 04:41:31,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:42:19] 2025-11-25 04:41:31,599 | INFO     | all payload control threads have been joined
[2025-11-24 23:42:19] 2025-11-25 04:41:32,193 | INFO     | all job control threads have been joined
[2025-11-24 23:42:19] 2025-11-25 04:41:32,202 | INFO     | all data control threads have been joined
[2025-11-24 23:42:19] 2025-11-25 04:41:32,524 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:32,525 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:32,555 | INFO     | [job] validate thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:32,590 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:32,605 | INFO     | [payload] control thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:32,821 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,058 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,198 | INFO     | [job] control thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,210 | INFO     | [data] control thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,423 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,432 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,526 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:33,708 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:34,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:42:19] 2025-11-25 04:41:35,347 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:41:35,530 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:42:19] 2025-11-25 04:42:01,497 | INFO     | PID=3389724 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:42:19] 2025-11-25 04:42:01,498 | INFO     | .. there are 19 such processes running
[2025-11-24 23:42:19] 2025-11-25 04:42:01,498 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:42:19] 2025-11-25 04:42:01,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:42:19] 2025-11-25 04:42:01,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:42:19] 2025-11-25 04:42:12,997 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:42:19] 2025-11-25 04:42:13,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140628584453952)>', '<ExcThread(monitor, started 140627933116160)>']
[2025-11-24 23:42:19] 2025-11-25 04:42:13,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:42:19] 2025-11-25 04:42:13,589 | INFO     | [monitor] control thread has ended
[2025-11-24 23:42:19] 2025-11-25 04:42:18,193 | INFO     | all workflow threads have been joined
[2025-11-24 23:42:19] 2025-11-25 04:42:18,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:42:19] 2025-11-25 04:42:18,197 | INFO     | traces error code: 0
[2025-11-24 23:42:19] 2025-11-25 04:42:18,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:42:19] 2025-11-25 04:42:18,392 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:42:19] 2025-11-25 04:42:18,395 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:42:19] 2025-11-25 04:42:18,397 [wrapper] pilotpid: 3389724
[2025-11-24 23:42:19] 2025-11-25 04:42:18,402 [wrapper] Pilot exit status: 0
[2025-11-24 23:42:19] 2025-11-25 04:42:18,472 [wrapper] pandaids: 6891584305
[2025-11-24 23:42:19] 2025-11-25 04:42:18,568 [wrapper] cleanup supervisor_pilot 2785290 3389725
[2025-11-24 23:42:19] 2025-11-25 04:42:18,571 [wrapper] Test setup, not cleaning
[2025-11-24 23:42:19] 2025-11-25 04:42:18,573 [wrapper] apfmon messages muted
[2025-11-24 23:42:19] 2025-11-25 04:42:18,576 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:42:19] 2025-11-25 04:42:18,579 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:42:19]  *** Error codes and diagnostics ***
[2025-11-24 23:42:19]     "exeErrorCode": 0,
[2025-11-24 23:42:19]     "exeErrorDiag": "",
[2025-11-24 23:42:19]     "pilotErrorCode": 0,
[2025-11-24 23:42:19]     "pilotErrorDiag": "",
[2025-11-24 23:42:19]  *** Listing of results directory ***
[2025-11-24 23:42:19] total 1324836
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-24 23:42:19] -rwx------. 1 boincer umatlas     36292 Nov 18 12:13 runpilot2-wrapper.sh
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:13 queuedata.json
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:42:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas 408918434 Nov 24 00:02 EVNT.47493065._000455.pool.root.1
[2025-11-24 23:42:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:02 input.tar.gz
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas      2773 Nov 24 00:02 pandaJob.out
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-24 23:42:19] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas       532 Nov 24 23:32 boinc_task_state.xml
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas      6902 Nov 24 23:39 init_data.xml
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas 916909683 Nov 24 23:40 HITS.47493068._004548.pool.root.1
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas      1051 Nov 24 23:41 memory_monitor_summary.json
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:41 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas   2438550 Nov 24 23:41 log.47493068._004548.job.log.tgz.1
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas        95 Nov 24 23:41 pilot_heartbeat.json
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas      8581 Nov 24 23:41 heartbeat.json
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas        28 Nov 24 23:42 wrapper_checkpoint.txt
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas      4824 Nov 24 23:42 pilotlog.txt
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas  11009366 Nov 24 23:42 log.47493068._004548.job.log.1
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas       353 Nov 24 23:42 output.list
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:42 boinc_mmap_file
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:42 runtime_log
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas  13465600 Nov 24 23:42 result.tar.gz
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas      8704 Nov 24 23:42 runtime_log.err
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas       661 Nov 24 23:42 5ngMDmASef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFYFKDmI4ouHn.diag
[2025-11-24 23:42:19] -rw-r--r--. 1 boincer umatlas     21116 Nov 24 23:42 stderr.txt
[2025-11-24 23:42:19] HITS file was successfully produced:
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas 916909683 Nov 24 23:40 shared/HITS.pool.root.1
[2025-11-24 23:42:19]  *** Contents of shared directory: ***
[2025-11-24 23:42:19] total 1308508
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas 408918434 Nov 24 00:02 ATLAS.root_0
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:02 input.tar.gz
[2025-11-24 23:42:19] -rw-r--r--. 2 boincer umatlas     15120 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas 916909683 Nov 24 23:40 HITS.pool.root.1
[2025-11-24 23:42:19] -rw-------. 1 boincer umatlas  13465600 Nov 24 23:42 result.tar.gz
23:42:40 (3382625): run_atlas exited; CPU time 199770.332941
23:42:40 (3382625): called boinc_finish(0)

</stderr_txt>
]]>

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