Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:38:15 (3559554): wrapper (7.7.26015): starting
01:38:15 (3559554): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 01:38:15] Arguments: --nthreads 8
[2025-11-24 01:38:15] Threads: 8
[2025-11-24 01:38:15] Checking for CVMFS
[2025-11-24 01:38:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:38:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:38:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:38:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:38:18] 2.13.3.0 9428 25124 328340 153236 2 368 13164380 18491393 26765 16776704 0 126095745 99.320 206315566 33489 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 01:38:18] CVMFS is ok
[2025-11-24 01:38:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 01:38:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 01:38:18] Further information can be found at the LHC@home message board.
[2025-11-24 01:38:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:38:18] Checking for apptainer binary...
[2025-11-24 01:38:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:38:18] Running /usr/bin/apptainer --version
[2025-11-24 01:38:18] apptainer version 1.4.4-1.el9
[2025-11-24 01:38:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:38:18] c-8-38.aglt2.org
[2025-11-24 01:38:18] apptainer works
[2025-11-24 01:38:18] Set ATHENA_PROC_NUMBER=8
[2025-11-24 01:38:18] Set ATHENA_CORE_NUMBER=8
[2025-11-24 01:38:18] Starting ATLAS job with PandaID=6895356006
[2025-11-24 01:38:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:41:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:41:05] 2025-11-24 22:40:22,007 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,320 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 17:41:05] 2025-11-24 22:40:22,342 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2473499999987
[2025-11-24 17:41:05] 2025-11-24 22:40:22,354 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895356006/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,355 | INFO     | extracted standard info from prmon json
[2025-11-24 17:41:05] 2025-11-24 22:40:22,356 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:41:05] 2025-11-24 22:40:22,356 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:41:05] 2025-11-24 22:40:22,381 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:41:05] 2025-11-24 22:40:22,383 | INFO     | sum of square deviations: 260846910934.8125
[2025-11-24 17:41:05] 2025-11-24 22:40:22,409 | INFO     | sum of deviations: 1922462125205.6248
[2025-11-24 17:41:05] 2025-11-24 22:40:22,410 | INFO     | mean x: 1763995225.3125
[2025-11-24 17:41:05] 2025-11-24 22:40:22,410 | INFO     | mean y: 2927269.591101695
[2025-11-24 17:41:05] 2025-11-24 22:40:22,410 | INFO     | intersect: -12997855440.671976
[2025-11-24 17:41:05] 2025-11-24 22:40:22,411 | INFO     | chi2: 8.238390127052336
[2025-11-24 17:41:05] 2025-11-24 22:40:22,412 | INFO     | sum of square deviations: 256724165236.494
[2025-11-24 17:41:05] 2025-11-24 22:40:22,433 | INFO     | sum of deviations: 2246602600768.986
[2025-11-24 17:41:05] 2025-11-24 22:40:22,434 | INFO     | mean x: 1763995072.8168263
[2025-11-24 17:41:05] 2025-11-24 22:40:22,434 | INFO     | mean y: 2939256.773162939
[2025-11-24 17:41:05] 2025-11-24 22:40:22,434 | INFO     | intersect: -15433846425.95854
[2025-11-24 17:41:05] 2025-11-24 22:40:22,435 | INFO     | chi2: 5.044935547387841
[2025-11-24 17:41:05] 2025-11-24 22:40:22,435 | INFO     | current chi2=5.044935547387841 (change=38.7630900019917 %)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,436 | INFO     | sum of square deviations: 252645094775.64005
[2025-11-24 17:41:05] 2025-11-24 22:40:22,458 | INFO     | sum of deviations: 2414810124975.771
[2025-11-24 17:41:05] 2025-11-24 22:40:22,458 | INFO     | mean x: 1763994920.3211992
[2025-11-24 17:41:05] 2025-11-24 22:40:22,458 | INFO     | mean y: 2945545.2740899357
[2025-11-24 17:41:05] 2025-11-24 22:40:22,458 | INFO     | intersect: -16857515560.374023
[2025-11-24 17:41:05] 2025-11-24 22:40:22,459 | INFO     | chi2: 4.036724275906756
[2025-11-24 17:41:05] 2025-11-24 22:40:22,460 | INFO     | PID=3568895 has CPU usage=17.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,461 | INFO     | current chi2=4.036724275906756 (change=19.984621448793636 %)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,461 | INFO     | .. there are 41 such processes running
[2025-11-24 17:41:05] 2025-11-24 22:40:22,461 | INFO     | right removable region: 933
[2025-11-24 17:41:05] 2025-11-24 22:40:22,462 | INFO     | sum of square deviations: 256723697366.4941
[2025-11-24 17:41:05] 2025-11-24 22:40:22,482 | INFO     | sum of deviations: 1589198256165.001
[2025-11-24 17:41:05] 2025-11-24 22:40:22,482 | INFO     | mean x: 1763995377.8168263
[2025-11-24 17:41:05] 2025-11-24 22:40:22,482 | INFO     | mean y: 2939589.0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,483 | INFO     | intersect: -10916731664.829082
[2025-11-24 17:41:05] 2025-11-24 22:40:22,484 | INFO     | chi2: 5.113239016089366
[2025-11-24 17:41:05] 2025-11-24 22:40:22,484 | INFO     | current chi2=5.113239016089366 (change=37.93400242968509 %)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,485 | INFO     | sum of square deviations: 252644387910.1929
[2025-11-24 17:41:05] 2025-11-24 22:40:22,505 | INFO     | sum of deviations: 1490498535520.9897
[2025-11-24 17:41:05] 2025-11-24 22:40:22,505 | INFO     | mean x: 1763995530.3169165
[2025-11-24 17:41:05] 2025-11-24 22:40:22,506 | INFO     | mean y: 2943273.9122055676
[2025-11-24 17:41:05] 2025-11-24 22:40:22,506 | INFO     | intersect: -10403908730.010181
[2025-11-24 17:41:05] 2025-11-24 22:40:22,507 | INFO     | chi2: 4.851726447791918
[2025-11-24 17:41:05] 2025-11-24 22:40:22,507 | INFO     | current chi2=4.851726447791918 (change=5.114420966330148 %)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,507 | INFO     | left removable region: 20
[2025-11-24 17:41:05] 2025-11-24 22:40:22,509 | INFO     | sum of square deviations: 235983604149.9605
[2025-11-24 17:41:05] 2025-11-24 22:40:22,528 | INFO     | sum of deviations: 1916139022126.5918
[2025-11-24 17:41:05] 2025-11-24 22:40:22,528 | INFO     | mean x: 1763995499.8247535
[2025-11-24 17:41:05] 2025-11-24 22:40:22,529 | INFO     | mean y: 2967100.6286966046
[2025-11-24 17:41:05] 2025-11-24 22:40:22,529 | INFO     | intersect: -14320318723.593163
[2025-11-24 17:41:05] 2025-11-24 22:40:22,530 | INFO     | chi2: 0.3834648547565669
[2025-11-24 17:41:05] 2025-11-24 22:40:22,530 | INFO     | current memory leak: 8.12 B/s (using 913 data points, chi2=0.38)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,531 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,531 | INFO     | ..............................
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . Timing measurements:
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . get job = 0 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . initial setup = 4 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . payload setup = 28 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . stage-in = 0 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . payload execution = 57564 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . stage-out = 5 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | . log creation = 1 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,532 | INFO     | ..............................
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | job summary report
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | --------------------------------------------------
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | PanDA job id: 6895356006
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | task id: 47556137
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | errors: (none)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,635 | INFO     | pilot state: finished 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | transexitcode: 0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | exeerrorcode: 0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | exeerrordiag: 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | exitcode: 0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | exitmsg: OK
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | cpuconsumptiontime: 305118 s
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | nevents: 1000
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | neventsw: 0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | pid: 3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:22,636 | INFO     | pgrp: 3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | corecount: 8
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | event service: False
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | sizes: {0: 2298585, 1: 2298784, 2: 2298784, 12: 2298812, 23: 2298840, 24: 2299130, 34: 2299286, 57595: 2351986, 57600: 2361771, 57601: 2361827, 57611: 2362073}
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | --------------------------------------------------
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | 
[2025-11-24 17:41:05] 2025-11-24 22:40:22,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,667 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,667 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:41:05] 2025-11-24 22:40:22,667 | INFO     | job 6895356006 has completed (purged errors)
[2025-11-24 17:41:05] 2025-11-24 22:40:22,667 | INFO     | overall cleanup function is called
[2025-11-24 17:41:05] 2025-11-24 22:40:23,701 | INFO     | --- collectZombieJob: --- 10, [3578207]
[2025-11-24 17:41:05] 2025-11-24 22:40:23,701 | INFO     | zombie collector waiting for pid 3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:23,701 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:41:05] 2025-11-24 22:40:23,701 | INFO     | collected zombie processes
[2025-11-24 17:41:05] 2025-11-24 22:40:23,701 | INFO     | will attempt to kill all subprocesses of pid=3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:24,267 | INFO     | process IDs to be killed: [3578207] (in reverse order)
[2025-11-24 17:41:05] 2025-11-24 22:40:24,410 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:41:05] 2025-11-24 22:40:24,411 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:41:05] 2025-11-24 22:40:24,427 | INFO     | did not find any defunct processes belonging to 3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:24,444 | INFO     | did not find any defunct processes belonging to 3578207
[2025-11-24 17:41:05] 2025-11-24 22:40:24,445 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:41:05] 2025-11-24 22:40:24,446 | INFO     | ready for new job
[2025-11-24 17:41:05] 2025-11-24 22:40:24,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:41:05] 2025-11-24 22:40:24,451 | INFO     | ***************************************
[2025-11-24 17:41:05] 2025-11-24 22:40:24,451 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:41:05] 2025-11-24 22:40:24,451 | INFO     | ***************************************
[2025-11-24 17:41:05] 2025-11-24 22:40:24,451 | INFO     | 
[2025-11-24 17:41:05] 2025-11-24 22:40:24,453 | INFO     | architecture information:
[2025-11-24 17:41:05] 2025-11-24 22:40:24,454 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:41:05] 2025-11-24 22:40:24,530 | INFO     | cat /etc/os-release:
[2025-11-24 17:41:05] NAME="CentOS Linux"
[2025-11-24 17:41:05] VERSION="7 (Core)"
[2025-11-24 17:41:05] ID="centos"
[2025-11-24 17:41:05] ID_LIKE="rhel fedora"
[2025-11-24 17:41:05] VERSION_ID="7"
[2025-11-24 17:41:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:41:05] ANSI_COLOR="0;31"
[2025-11-24 17:41:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:41:05] HOME_URL="https://www.centos.org/"
[2025-11-24 17:41:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:41:05] 
[2025-11-24 17:41:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:41:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:41:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:41:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:41:05] 
[2025-11-24 17:41:05] 2025-11-24 22:40:24,530 | INFO     | ***************************************
[2025-11-24 17:41:05] 2025-11-24 22:40:25,034 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:41:05] 2025-11-24 22:40:25,075 | INFO     | sufficient remaining disk space (90622132224 B)
[2025-11-24 17:41:05] 2025-11-24 22:40:25,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:41:05] 2025-11-24 22:40:25,076 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:41:05] 2025-11-24 22:40:25,076 | INFO     | update_server=False
[2025-11-24 17:41:05] 2025-11-24 22:40:25,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:41:05] 2025-11-24 22:40:25,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:41:05] 2025-11-24 22:40:25,135 | INFO     | all payload control threads have been joined
[2025-11-24 17:41:05] 2025-11-24 22:40:25,337 | INFO     | all job control threads have been joined
[2025-11-24 17:41:05] 2025-11-24 22:40:25,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:41:05] 2025-11-24 22:40:25,536 | INFO     | aborting loop
[2025-11-24 17:41:05] 2025-11-24 22:40:25,616 | INFO     | all data control threads have been joined
[2025-11-24 17:41:05] 2025-11-24 22:40:26,082 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,141 | INFO     | [payload] control thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,150 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,342 | INFO     | [job] control thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,368 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,483 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,483 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,542 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,622 | INFO     | [data] control thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:26,962 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:27,100 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:27,540 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:27,549 | INFO     | [job] validate thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:27,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:41:05] 2025-11-24 22:40:27,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:41:05] 2025-11-24 22:40:28,655 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:31,733 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:41:05] 2025-11-24 22:40:55,100 | INFO     | PID=3568895 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 17:41:05] 2025-11-24 22:40:55,100 | INFO     | .. there are 42 such processes running
[2025-11-24 17:41:05] 2025-11-24 22:40:55,101 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:41:05] 2025-11-24 22:40:55,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:41:05] 2025-11-24 22:40:55,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:41:05] 2025-11-24 22:40:58,616 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:41:05] 2025-11-24 22:41:00,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140474942900032)>', '<ExcThread(monitor, started 140474572576512)>']
[2025-11-24 17:41:05] 2025-11-24 22:41:01,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:41:05] 2025-11-24 22:41:01,153 | INFO     | [monitor] control thread has ended
[2025-11-24 17:41:05] 2025-11-24 22:41:05,343 | INFO     | all workflow threads have been joined
[2025-11-24 17:41:05] 2025-11-24 22:41:05,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:41:05] 2025-11-24 22:41:05,343 | INFO     | traces error code: 0
[2025-11-24 17:41:05] 2025-11-24 22:41:05,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:41:05] 2025-11-24 22:41:05,562 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:41:05] 2025-11-24 22:41:05,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:41:05] 2025-11-24 22:41:05,567 [wrapper] pilotpid: 3568895
[2025-11-24 17:41:05] 2025-11-24 22:41:05,570 [wrapper] Pilot exit status: 0
[2025-11-24 17:41:05] 2025-11-24 22:41:05,580 [wrapper] pandaids: 6895356006
[2025-11-24 17:41:05] 2025-11-24 22:41:05,662 [wrapper] cleanup supervisor_pilot 1641478 3568896
[2025-11-24 17:41:05] 2025-11-24 22:41:05,667 [wrapper] Test setup, not cleaning
[2025-11-24 17:41:05] 2025-11-24 22:41:05,670 [wrapper] apfmon messages muted
[2025-11-24 17:41:05] 2025-11-24 22:41:05,673 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:41:05] 2025-11-24 22:41:05,676 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:41:05]  *** Error codes and diagnostics ***
[2025-11-24 17:41:05]     "exeErrorCode": 0,
[2025-11-24 17:41:05]     "exeErrorDiag": "",
[2025-11-24 17:41:05]     "pilotErrorCode": 0,
[2025-11-24 17:41:05]     "pilotErrorDiag": "",
[2025-11-24 17:41:05]  *** Listing of results directory ***
[2025-11-24 17:41:05] total 1324276
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 04:55 queuedata.json
[2025-11-24 17:41:05] -rwx------. 1 boincer umatlas     36292 Nov 23 04:56 runpilot2-wrapper.sh
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas       100 Nov 24 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:41:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 01:38 run_atlas
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas       105 Nov 24 01:38 job.xml
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas 411483978 Nov 24 01:38 EVNT.47483658._000683.pool.root.1
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 01:38 input.tar.gz
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 01:38 start_atlas.sh
[2025-11-24 17:41:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 01:38 shared
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas         0 Nov 24 01:38 boinc_lockfile
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 01:38 pandaJob.out
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas        57 Nov 24 01:38 setup.sh.local
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas    989786 Nov 24 01:39 agis_schedconf.cvmfs.json
[2025-11-24 17:41:05] drwx------. 5 boincer umatlas      4096 Nov 24 01:39 pilot3
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas       533 Nov 24 17:25 boinc_task_state.xml
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas 921076814 Nov 24 17:39 HITS.47556137._006789.pool.root.1
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas      1056 Nov 24 17:40 memory_monitor_summary.json
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas   1516227 Nov 24 17:40 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas   2125713 Nov 24 17:40 log.47556137._006789.job.log.tgz.1
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas        95 Nov 24 17:40 pilot_heartbeat.json
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas      8617 Nov 24 17:40 heartbeat.json
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas      6663 Nov 24 17:40 init_data.xml
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 17:40 boinc_mmap_file
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas        29 Nov 24 17:40 wrapper_checkpoint.txt
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas      4824 Nov 24 17:41 pilotlog.txt
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas   7663903 Nov 24 17:41 log.47556137._006789.job.log.1
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas       353 Nov 24 17:41 output.list
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas       620 Nov 24 17:41 runtime_log
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas   9809920 Nov 24 17:41 result.tar.gz
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas      9333 Nov 24 17:41 runtime_log.err
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas       658 Nov 24 17:41 C2vLDm30Lh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcmKKDmXCXG7m.diag
[2025-11-24 17:41:05] -rw-r--r--. 1 boincer umatlas     21446 Nov 24 17:41 stderr.txt
[2025-11-24 17:41:05] HITS file was successfully produced:
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas 921076814 Nov 24 17:39 shared/HITS.pool.root.1
[2025-11-24 17:41:05]  *** Contents of shared directory: ***
[2025-11-24 17:41:05] total 1311516
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas 411483978 Nov 24 01:38 ATLAS.root_0
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 01:38 input.tar.gz
[2025-11-24 17:41:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 01:38 start_atlas.sh
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas 921076814 Nov 24 17:39 HITS.pool.root.1
[2025-11-24 17:41:05] -rw-------. 1 boincer umatlas   9809920 Nov 24 17:41 result.tar.gz
17:41:07 (3559554): run_atlas exited; CPU time 307252.766216
17:41:07 (3559554): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN