Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:37:31 (2744838): wrapper (7.7.26015): starting
17:37:31 (2744838): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:37:31] Arguments: --nthreads 8
[2025-11-24 17:37:31] Threads: 8
[2025-11-24 17:37:31] Checking for CVMFS
[2025-11-24 17:37:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:37:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:37:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:37:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:37:33] 2.13.3.0 11066 27781 342816 153261 0 482 31356438 32935937 20324 16776704 0 77904918 99.444 108560715 38784 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 17:37:33] CVMFS is ok
[2025-11-24 17:37:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:37:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:37:33] Further information can be found at the LHC@home message board.
[2025-11-24 17:37:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:37:33] Checking for apptainer binary...
[2025-11-24 17:37:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:37:33] Running /usr/bin/apptainer --version
[2025-11-24 17:37:33] apptainer version 1.4.4-1.el9
[2025-11-24 17:37:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:37:34] c6-1-24-4.aglt2.org
[2025-11-24 17:37:34] apptainer works
[2025-11-24 17:37:34] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:37:34] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:37:34] Starting ATLAS job with PandaID=6895350759
[2025-11-24 17:37:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 02:06:34]  *** The last 200 lines of the pilot log: ***
[2025-11-26 02:06:34] 2025-11-26 07:05:44,405 | INFO     | time since job start (116819s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:45,533 | INFO     | monitor loop #6927: job 0:6895350759 is in state 'finished'
[2025-11-26 02:06:34] 2025-11-26 07:05:45,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:06:34] 2025-11-26 07:05:46,432 | INFO     | time since job start (116821s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:48,061 | INFO     | monitor loop #6928: job 0:6895350759 is in state 'finished'
[2025-11-26 02:06:34] 2025-11-26 07:05:48,062 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:06:34] 2025-11-26 07:05:48,459 | INFO     | time since job start (116823s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:50,472 | INFO     | time since job start (116825s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:50,565 | INFO     | monitor loop #6929: job 0:6895350759 is in state 'finished'
[2025-11-26 02:06:34] 2025-11-26 07:05:50,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:06:34] 2025-11-26 07:05:52,480 | INFO     | time since job start (116827s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:53,073 | INFO     | monitor loop #6930: job 0:6895350759 is in state 'finished'
[2025-11-26 02:06:34] 2025-11-26 07:05:53,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:06:34] 2025-11-26 07:05:54,487 | INFO     | time since job start (116829s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:55,630 | INFO     | monitor loop #6931: job 0:6895350759 is in state 'finished'
[2025-11-26 02:06:34] 2025-11-26 07:05:55,631 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 02:06:34] 2025-11-26 07:05:56,174 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 02:06:34] 2025-11-26 07:05:56,181 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2804.716928571429
[2025-11-26 02:06:34] 2025-11-26 07:05:56,201 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895350759/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 02:06:34] 2025-11-26 07:05:56,202 | INFO     | extracted standard info from prmon json
[2025-11-26 02:06:34] 2025-11-26 07:05:56,202 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 02:06:34] 2025-11-26 07:05:56,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 02:06:34] 2025-11-26 07:05:56,259 | INFO     | fitting pss+swap vs Time
[2025-11-26 02:06:34] 2025-11-26 07:05:56,265 | INFO     | sum of square deviations: 2170793283271.679
[2025-11-26 02:06:34] 2025-11-26 07:05:56,492 | INFO     | sum of deviations: 501702399818.3757
[2025-11-26 02:06:34] 2025-11-26 07:05:56,493 | INFO     | mean x: 1764082380.451124
[2025-11-26 02:06:34] 2025-11-26 07:05:56,493 | INFO     | mean y: 2920211.907997909
[2025-11-26 02:06:34] 2025-11-26 07:05:56,493 | INFO     | intersect: -404785289.38034225
[2025-11-26 02:06:34] 2025-11-26 07:05:56,499 | INFO     | chi2: 40.92020177623567
[2025-11-26 02:06:34] 2025-11-26 07:05:56,506 | INFO     | time since job start (116831s) is within the limit (172800.0s)
[2025-11-26 02:06:34] 2025-11-26 07:05:56,507 | INFO     | sum of square deviations: 2153817595071.5596
[2025-11-26 02:06:34] 2025-11-26 07:05:57,126 | INFO     | sum of deviations: 1296571322077.5444
[2025-11-26 02:06:34] 2025-11-26 07:05:57,127 | INFO     | mean x: 1764082227.9575472
[2025-11-26 02:06:34] 2025-11-26 07:05:57,127 | INFO     | mean y: 2927352.253668763
[2025-11-26 02:06:34] 2025-11-26 07:05:57,127 | INFO     | intersect: -1059028141.0017495
[2025-11-26 02:06:34] 2025-11-26 07:05:57,265 | INFO     | chi2: 36.00558321400617
[2025-11-26 02:06:34] 2025-11-26 07:05:57,265 | INFO     | current chi2=36.00558321400617 (change=12.010250069401305 %)
[2025-11-26 02:06:34] 2025-11-26 07:05:57,265 | INFO     | right removable region: 1907
[2025-11-26 02:06:34] 2025-11-26 07:05:57,367 | INFO     | sum of square deviations: 2153814734781.5571
[2025-11-26 02:06:34] 2025-11-26 07:05:57,766 | INFO     | sum of deviations: -235724774568.23523
[2025-11-26 02:06:34] 2025-11-26 07:05:57,766 | INFO     | mean x: 1764082532.9575472
[2025-11-26 02:06:34] 2025-11-26 07:05:57,766 | INFO     | mean y: 2926834.8364779875
[2025-11-26 02:06:34] 2025-11-26 07:05:57,767 | INFO     | intersect: 195997274.31573716
[2025-11-26 02:06:34] 2025-11-26 07:05:57,773 | INFO     | chi2: 37.343285917438585
[2025-11-26 02:06:34] 2025-11-26 07:05:57,773 | INFO     | current chi2=37.343285917438585 (change=8.741197998868063 %)
[2025-11-26 02:06:34] 2025-11-26 07:05:57,773 | INFO     | left removable region: 10
[2025-11-26 02:06:34] 2025-11-26 07:05:57,775 | INFO     | sum of square deviations: 2116777997788.4458
[2025-11-26 02:06:34] 2025-11-26 07:05:58,116 | INFO     | sum of deviations: 376655292099.192
[2025-11-26 02:06:34] 2025-11-26 07:05:58,116 | INFO     | mean x: 1764082502.4691617
[2025-11-26 02:06:34] 2025-11-26 07:05:58,116 | INFO     | mean y: 2938548.934633632
[2025-11-26 02:06:34] 2025-11-26 07:05:58,116 | INFO     | intersect: -310958803.999305
[2025-11-26 02:06:34] 2025-11-26 07:05:58,118 | INFO     | chi2: 30.54525004468361
[2025-11-26 02:06:34] 2025-11-26 07:05:58,119 | INFO     | current memory leak: 0.18 B/s (using 1897 data points, chi2=30.55)
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | could have reported an average CPU frequency of 2932 MHz (67 samples)
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | ..............................
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | . Timing measurements:
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | . get job = 0 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | . initial setup = 9 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,125 | INFO     | . payload setup = 40 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,126 | INFO     | . stage-in = 0 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,126 | INFO     | . payload execution = 116667 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,126 | INFO     | . stage-out = 11 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,126 | INFO     | . log creation = 5 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,126 | INFO     | ..............................
[2025-11-26 02:06:34] 2025-11-26 07:05:58,467 | INFO     | 
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | job summary report
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | --------------------------------------------------
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | PanDA job id: 6895350759
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | task id: 47556137
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | errors: (none)
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | pilot state: finished 
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | transexitcode: 0
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | exeerrorcode: 0
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | exeerrordiag: 
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | exitcode: 0
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | exitmsg: OK
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | cpuconsumptiontime: 255413 s
[2025-11-26 02:06:34] 2025-11-26 07:05:58,468 | INFO     | nevents: 1000
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | neventsw: 0
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | pid: 2760819
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | pgrp: 2760819
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | corecount: 8
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | event service: False
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | sizes: {0: 2283430, 1: 2284115, 2: 2284143, 3: 2284342, 14: 2284342, 25: 2284370, 34: 2284788, 36: 2284816, 116712: 2363786, 116725: 2372785, 116726: 2372841, 1167
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | --------------------------------------------------
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | 
[2025-11-26 02:06:34] 2025-11-26 07:05:58,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 02:06:34] 2025-11-26 07:05:58,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 02:06:34] 2025-11-26 07:05:58,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 02:06:34] 2025-11-26 07:05:58,585 | INFO     | job 6895350759 has completed (purged errors)
[2025-11-26 02:06:34] 2025-11-26 07:05:58,587 | INFO     | overall cleanup function is called
[2025-11-26 02:06:34] 2025-11-26 07:05:59,626 | INFO     | --- collectZombieJob: --- 10, [2760819]
[2025-11-26 02:06:34] 2025-11-26 07:05:59,627 | INFO     | zombie collector waiting for pid 2760819
[2025-11-26 02:06:34] 2025-11-26 07:05:59,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 02:06:34] 2025-11-26 07:05:59,627 | INFO     | collected zombie processes
[2025-11-26 02:06:34] 2025-11-26 07:05:59,627 | INFO     | will attempt to kill all subprocesses of pid=2760819
[2025-11-26 02:06:34] 2025-11-26 07:06:00,994 | INFO     | process IDs to be killed: [2760819] (in reverse order)
[2025-11-26 02:06:34] 2025-11-26 07:06:01,156 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 02:06:34] 2025-11-26 07:06:01,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 02:06:34] 2025-11-26 07:06:01,179 | INFO     | did not find any defunct processes belonging to 2760819
[2025-11-26 02:06:34] 2025-11-26 07:06:01,194 | INFO     | did not find any defunct processes belonging to 2760819
[2025-11-26 02:06:34] 2025-11-26 07:06:01,200 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 02:06:34] 2025-11-26 07:06:01,200 | INFO     | ready for new job
[2025-11-26 02:06:34] 2025-11-26 07:06:01,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 02:06:34] 2025-11-26 07:06:01,207 | INFO     | ***************************************
[2025-11-26 02:06:34] 2025-11-26 07:06:01,207 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 02:06:34] 2025-11-26 07:06:01,208 | INFO     | ***************************************
[2025-11-26 02:06:34] 2025-11-26 07:06:01,208 | INFO     | 
[2025-11-26 02:06:34] 2025-11-26 07:06:01,211 | INFO     | architecture information:
[2025-11-26 02:06:34] 2025-11-26 07:06:01,211 | INFO     | executing command: cat /etc/os-release
[2025-11-26 02:06:34] 2025-11-26 07:06:01,252 | INFO     | cat /etc/os-release:
[2025-11-26 02:06:34] NAME="CentOS Linux"
[2025-11-26 02:06:34] VERSION="7 (Core)"
[2025-11-26 02:06:34] ID="centos"
[2025-11-26 02:06:34] ID_LIKE="rhel fedora"
[2025-11-26 02:06:34] VERSION_ID="7"
[2025-11-26 02:06:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 02:06:34] ANSI_COLOR="0;31"
[2025-11-26 02:06:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 02:06:34] HOME_URL="https://www.centos.org/"
[2025-11-26 02:06:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 02:06:34] 
[2025-11-26 02:06:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 02:06:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 02:06:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 02:06:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 02:06:34] 
[2025-11-26 02:06:34] 2025-11-26 07:06:01,253 | INFO     | ***************************************
[2025-11-26 02:06:34] 2025-11-26 07:06:01,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 02:06:34] 2025-11-26 07:06:02,177 | INFO     | sufficient remaining disk space (69519540224 B)
[2025-11-26 02:06:34] 2025-11-26 07:06:02,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 02:06:34] 2025-11-26 07:06:02,177 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 02:06:34] 2025-11-26 07:06:02,178 | INFO     | update_server=False
[2025-11-26 02:06:34] 2025-11-26 07:06:02,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 02:06:34] 2025-11-26 07:06:02,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:06:34] 2025-11-26 07:06:02,197 | INFO     | aborting loop
[2025-11-26 02:06:34] 2025-11-26 07:06:03,038 | INFO     | all data control threads have been joined
[2025-11-26 02:06:34] 2025-11-26 07:06:03,189 | INFO     | [job] retrieve thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,246 | INFO     | [job] job monitor thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,356 | INFO     | all payload control threads have been joined
[2025-11-26 02:06:34] 2025-11-26 07:06:03,396 | INFO     | [job] validate thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 02:06:34] 2025-11-26 07:06:03,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 02:06:34] 2025-11-26 07:06:03,530 | INFO     | all job control threads have been joined
[2025-11-26 02:06:34] 2025-11-26 07:06:03,665 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,672 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,679 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:03,680 | INFO     | [data] copytool_in thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,013 | INFO     | [payload] failed_post thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,059 | INFO     | [data] control thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,364 | INFO     | [payload] control thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,497 | INFO     | [job] queue monitor thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,536 | INFO     | [job] control thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:04,553 | INFO     | [payload] validate_post thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:05,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 02:06:34] 2025-11-26 07:06:05,552 | INFO     | [data] copytool_out thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:09,433 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 02:06:34] 2025-11-26 07:06:18,430 | INFO     | [monitor] cgroup control has ended
[2025-11-26 02:06:34] 2025-11-26 07:06:19,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060233676608)>', '<ExcThread(monitor, started 140059739150080)>']
[2025-11-26 02:06:34] 2025-11-26 07:06:24,801 | INFO     | all workflow threads have been joined
[2025-11-26 02:06:34] 2025-11-26 07:06:24,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 02:06:34] 2025-11-26 07:06:24,803 | INFO     | traces error code: 0
[2025-11-26 02:06:34] 2025-11-26 07:06:24,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 02:06:34] 2025-11-26 07:06:31,406 | INFO     | PID=2750504 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 02:06:34] 2025-11-26 07:06:31,412 | INFO     | .. there are 34 such processes running
[2025-11-26 02:06:34] 2025-11-26 07:06:31,413 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 02:06:34] 2025-11-26 07:06:31,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 02:06:34] 2025-11-26 07:06:31,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 02:06:34] 2025-11-26 07:06:31,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 02:06:34] 2025-11-26 07:06:31,414 | INFO     | [monitor] control thread has ended
[2025-11-26 02:06:34] 2025-11-26 07:06:31,865 [wrapper] ==== pilot stdout END ====
[2025-11-26 02:06:34] 2025-11-26 07:06:31,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 02:06:34] 2025-11-26 07:06:32,068 [wrapper] pilotpid: 2750504
[2025-11-26 02:06:34] 2025-11-26 07:06:32,138 [wrapper] Pilot exit status: 0
[2025-11-26 02:06:34] 2025-11-26 07:06:32,417 [wrapper] pandaids: 6895350759
[2025-11-26 02:06:34] 2025-11-26 07:06:33,111 [wrapper] cleanup supervisor_pilot  593995 2750505
[2025-11-26 02:06:34] 2025-11-26 07:06:33,129 [wrapper] Test setup, not cleaning
[2025-11-26 02:06:34] 2025-11-26 07:06:33,147 [wrapper] apfmon messages muted
[2025-11-26 02:06:34] 2025-11-26 07:06:33,177 [wrapper] ==== wrapper stdout END ====
[2025-11-26 02:06:34] 2025-11-26 07:06:33,229 [wrapper] ==== wrapper stderr END ====
[2025-11-26 02:06:34]  *** Error codes and diagnostics ***
[2025-11-26 02:06:34]     "exeErrorCode": 0,
[2025-11-26 02:06:34]     "exeErrorDiag": "",
[2025-11-26 02:06:34]     "pilotErrorCode": 0,
[2025-11-26 02:06:34]     "pilotErrorDiag": "",
[2025-11-26 02:06:34]  *** Listing of results directory ***
[2025-11-26 02:06:34] total 1339996
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:52 pilot3.tar.gz
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:57 queuedata.json
[2025-11-26 02:06:34] -rwx------. 1 boincer umatlas     36292 Nov 22 16:58 runpilot2-wrapper.sh
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 02:06:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:37 run_atlas
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:37 job.xml
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas 409347455 Nov 24 17:37 EVNT.47483658._000521.pool.root.1
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:37 start_atlas.sh
[2025-11-26 02:06:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:37 shared
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 17:37 input.tar.gz
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:37 boinc_lockfile
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 17:37 pandaJob.out
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas        57 Nov 24 17:37 setup.sh.local
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas    991801 Nov 24 17:38 agis_schedconf.cvmfs.json
[2025-11-26 02:06:34] drwx------. 5 boincer umatlas      4096 Nov 24 17:38 pilot3
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas       534 Nov 26 00:49 boinc_task_state.xml
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas 924193378 Nov 26 01:59 HITS.47556137._005166.pool.root.1
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas      6847 Nov 26 02:03 init_data.xml
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas      1070 Nov 26 02:05 memory_monitor_summary.json
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas   1516240 Nov 26 02:05 agis_ddmendpoints.agis.ALL.json
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas   2785478 Nov 26 02:05 log.47556137._005166.job.log.tgz.1
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas      8661 Nov 26 02:05 heartbeat.json
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 02:06 boinc_mmap_file
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas        30 Nov 26 02:06 wrapper_checkpoint.txt
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas        95 Nov 26 02:06 pilot_heartbeat.json
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas       823 Nov 26 02:06 pilotlog.txt
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas  14559602 Nov 26 02:06 log.47556137._005166.job.log.1
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas       353 Nov 26 02:06 output.list
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas       620 Nov 26 02:06 runtime_log
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas  17367040 Nov 26 02:06 result.tar.gz
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas      9349 Nov 26 02:06 runtime_log.err
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas       668 Nov 26 02:06 azALDmEoAh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6JIKDmj2LAYm.diag
[2025-11-26 02:06:34] -rw-r--r--. 1 boincer umatlas     21827 Nov 26 02:06 stderr.txt
[2025-11-26 02:06:34] HITS file was successfully produced:
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas 924193378 Nov 26 01:59 shared/HITS.pool.root.1
[2025-11-26 02:06:34]  *** Contents of shared directory: ***
[2025-11-26 02:06:34] total 1319856
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas 409347455 Nov 24 17:37 ATLAS.root_0
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:37 start_atlas.sh
[2025-11-26 02:06:34] -rw-r--r--. 2 boincer umatlas    590104 Nov 24 17:37 input.tar.gz
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas 924193378 Nov 26 01:59 HITS.pool.root.1
[2025-11-26 02:06:34] -rw-------. 1 boincer umatlas  17367040 Nov 26 02:06 result.tar.gz
02:06:36 (2744838): run_atlas exited; CPU time 258732.649369
02:06:36 (2744838): called boinc_finish(0)

</stderr_txt>
]]>

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