Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:26 (1228772): wrapper (7.7.26015): starting
00:02:26 (1228772): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:02:26] Arguments: --nthreads 8
[2025-11-24 00:02:26] Threads: 8
[2025-11-24 00:02:26] Checking for CVMFS
[2025-11-24 00:02:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:27] 2.13.2.0 6307 29569 290552 153233 2 147 21945018 40960000 14991 16776704 0 42724448 99.745 25570205 39500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:02:27] CVMFS is ok
[2025-11-24 00:02:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:27] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:27] Checking for apptainer binary...
[2025-11-24 00:02:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:27] Running /usr/bin/apptainer --version
[2025-11-24 00:02:27] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:27] c-206-39.aglt2.org
[2025-11-24 00:02:27] apptainer works
[2025-11-24 00:02:27] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:02:27] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:02:27] Starting ATLAS job with PandaID=6895368120
[2025-11-24 00:02:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:46:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:46:42] 2025-11-25 04:46:08,061 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:46:42] 2025-11-25 04:46:08,208 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:46:42] 2025-11-25 04:46:08,210 | INFO     | sum of square deviations: 849015748365.7406
[2025-11-24 23:46:42] 2025-11-25 04:46:08,419 | INFO     | time since job start (85400s) is within the limit (172800.0s)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,452 | INFO     | sum of deviations: 6859592304644.304
[2025-11-24 23:46:42] 2025-11-25 04:46:08,453 | INFO     | mean x: 1764003261.3109365
[2025-11-24 23:46:42] 2025-11-25 04:46:08,453 | INFO     | mean y: 2924241.999285204
[2025-11-24 23:46:42] 2025-11-25 04:46:08,453 | INFO     | intersect: -14249276874.349554
[2025-11-24 23:46:42] 2025-11-25 04:46:08,475 | INFO     | chi2: 11.649221906151814
[2025-11-24 23:46:42] 2025-11-25 04:46:08,477 | INFO     | sum of square deviations: 839945801536.4464
[2025-11-24 23:46:42] 2025-11-25 04:46:08,693 | INFO     | sum of deviations: 7225863005954.345
[2025-11-24 23:46:42] 2025-11-25 04:46:08,693 | INFO     | mean x: 1764003108.8192253
[2025-11-24 23:46:42] 2025-11-25 04:46:08,693 | INFO     | mean y: 2930396.576757532
[2025-11-24 23:46:42] 2025-11-25 04:46:08,693 | INFO     | intersect: -15172387800.25122
[2025-11-24 23:46:42] 2025-11-25 04:46:08,694 | INFO     | chi2: 9.458651758711174
[2025-11-24 23:46:42] 2025-11-25 04:46:08,695 | INFO     | current chi2=9.458651758711174 (change=18.804433163762006 %)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,695 | INFO     | right removable region: 1393
[2025-11-24 23:46:42] 2025-11-25 04:46:08,721 | INFO     | sum of square deviations: 839943829406.4462
[2025-11-24 23:46:42] 2025-11-25 04:46:08,824 | INFO     | sum of deviations: 6331275574698.633
[2025-11-24 23:46:42] 2025-11-25 04:46:08,824 | INFO     | mean x: 1764003413.8192253
[2025-11-24 23:46:42] 2025-11-25 04:46:08,825 | INFO     | mean y: 2933122.1334289815
[2025-11-24 23:46:42] 2025-11-25 04:46:08,825 | INFO     | intersect: -13293660455.428669
[2025-11-24 23:46:42] 2025-11-25 04:46:08,826 | INFO     | chi2: 8.11266968930844
[2025-11-24 23:46:42] 2025-11-25 04:46:08,826 | INFO     | current chi2=8.11266968930844 (change=30.358699021569528 %)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,827 | INFO     | sum of square deviations: 830936748871.956
[2025-11-24 23:46:42] 2025-11-25 04:46:08,867 | INFO     | sum of deviations: 5822223083763.824
[2025-11-24 23:46:42] 2025-11-25 04:46:08,868 | INFO     | mean x: 1764003566.3275738
[2025-11-24 23:46:42] 2025-11-25 04:46:08,868 | INFO     | mean y: 2941743.061915047
[2025-11-24 23:46:42] 2025-11-25 04:46:08,868 | INFO     | intersect: -12357111290.645878
[2025-11-24 23:46:42] 2025-11-25 04:46:08,869 | INFO     | chi2: 4.890178727273625
[2025-11-24 23:46:42] 2025-11-25 04:46:08,869 | INFO     | current chi2=4.890178727273625 (change=39.72170796355342 %)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,871 | INFO     | sum of square deviations: 821994358688.4387
[2025-11-24 23:46:42] 2025-11-25 04:46:08,910 | INFO     | sum of deviations: 5456510520325.497
[2025-11-24 23:46:42] 2025-11-25 04:46:08,910 | INFO     | mean x: 1764003718.8352602
[2025-11-24 23:46:42] 2025-11-25 04:46:08,910 | INFO     | mean y: 2947975.625
[2025-11-24 23:46:42] 2025-11-25 04:46:08,910 | INFO     | intersect: -11706748992.461111
[2025-11-24 23:46:42] 2025-11-25 04:46:08,911 | INFO     | chi2: 3.1706816756288903
[2025-11-24 23:46:42] 2025-11-25 04:46:08,912 | INFO     | current chi2=3.1706816756288903 (change=35.16225372407584 %)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,913 | INFO     | sum of square deviations: 813117016846.2023
[2025-11-24 23:46:42] 2025-11-25 04:46:08,952 | INFO     | sum of deviations: 5318963322818.937
[2025-11-24 23:46:42] 2025-11-25 04:46:08,952 | INFO     | mean x: 1764003871.3372009
[2025-11-24 23:46:42] 2025-11-25 04:46:08,952 | INFO     | mean y: 2950338.3248730963
[2025-11-24 23:46:42] 2025-11-25 04:46:08,952 | INFO     | intersect: -11536190644.537966
[2025-11-24 23:46:42] 2025-11-25 04:46:08,953 | INFO     | chi2: 3.0800650908699487
[2025-11-24 23:46:42] 2025-11-25 04:46:08,954 | INFO     | current chi2=3.0800650908699487 (change=2.8579527694456472 %)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,954 | INFO     | left removable region: 40
[2025-11-24 23:46:42] 2025-11-25 04:46:08,955 | INFO     | sum of square deviations: 767995004573.7449
[2025-11-24 23:46:42] 2025-11-25 04:46:08,992 | INFO     | sum of deviations: 5262697216277.017
[2025-11-24 23:46:42] 2025-11-25 04:46:08,993 | INFO     | mean x: 1764004298.2653363
[2025-11-24 23:46:42] 2025-11-25 04:46:08,993 | INFO     | mean y: 2964440.083518108
[2025-11-24 23:46:42] 2025-11-25 04:46:08,993 | INFO     | intersect: -12084901307.343044
[2025-11-24 23:46:42] 2025-11-25 04:46:08,994 | INFO     | chi2: 0.6928390563061076
[2025-11-24 23:46:42] 2025-11-25 04:46:08,994 | INFO     | current memory leak: 6.85 B/s (using 1353 data points, chi2=0.69)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | could have reported an average CPU frequency of 3233 MHz (50 samples)
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | ..............................
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . Timing measurements:
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . get job = 0 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . initial setup = 3 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . payload setup = 15 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . stage-in = 0 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . payload execution = 85330 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,996 | INFO     | . stage-out = 6 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,997 | INFO     | . log creation = 1 s
[2025-11-24 23:46:42] 2025-11-25 04:46:08,997 | INFO     | ..............................
[2025-11-24 23:46:42] 2025-11-25 04:46:09,412 | INFO     | 
[2025-11-24 23:46:42] 2025-11-25 04:46:09,443 | INFO     | job summary report
[2025-11-24 23:46:42] 2025-11-25 04:46:09,443 | INFO     | --------------------------------------------------
[2025-11-24 23:46:42] 2025-11-25 04:46:09,443 | INFO     | PanDA job id: 6895368120
[2025-11-24 23:46:42] 2025-11-25 04:46:09,443 | INFO     | task id: 47556149
[2025-11-24 23:46:42] 2025-11-25 04:46:09,443 | INFO     | errors: (none)
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | pilot state: finished 
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | transexitcode: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | exeerrorcode: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | exeerrordiag: 
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | exitcode: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | exitmsg: OK
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | cpuconsumptiontime: 199689 s
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | nevents: 1000
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | neventsw: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | pid: 1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | pgrp: 1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | corecount: 8
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | event service: False
[2025-11-24 23:46:42] 2025-11-25 04:46:09,444 | INFO     | sizes: {0: 2298806, 1: 2298834, 11: 2299124, 85349: 2363836, 85350: 2363835, 85356: 2373676, 85359: 2373860, 85376: 2374106}
[2025-11-24 23:46:42] 2025-11-25 04:46:09,445 | INFO     | --------------------------------------------------
[2025-11-24 23:46:42] 2025-11-25 04:46:09,445 | INFO     | 
[2025-11-24 23:46:42] 2025-11-25 04:46:09,445 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-24 23:46:42] 2025-11-25 04:46:09,585 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,587 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,587 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:46:42] 2025-11-25 04:46:09,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:46:42] 2025-11-25 04:46:09,589 | INFO     | job 6895368120 has completed (purged errors)
[2025-11-24 23:46:42] 2025-11-25 04:46:09,589 | INFO     | overall cleanup function is called
[2025-11-24 23:46:42] 2025-11-25 04:46:10,619 | INFO     | --- collectZombieJob: --- 10, [1265698]
[2025-11-24 23:46:42] 2025-11-25 04:46:10,619 | INFO     | zombie collector waiting for pid 1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:10,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:46:42] 2025-11-25 04:46:10,620 | INFO     | collected zombie processes
[2025-11-24 23:46:42] 2025-11-25 04:46:10,620 | INFO     | will attempt to kill all subprocesses of pid=1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:10,911 | INFO     | process IDs to be killed: [1265698] (in reverse order)
[2025-11-24 23:46:42] 2025-11-25 04:46:11,176 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:46:42] 2025-11-25 04:46:11,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:46:42] 2025-11-25 04:46:11,307 | INFO     | did not find any defunct processes belonging to 1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:11,399 | INFO     | did not find any defunct processes belonging to 1265698
[2025-11-24 23:46:42] 2025-11-25 04:46:11,416 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:46:42] 2025-11-25 04:46:11,417 | INFO     | ready for new job
[2025-11-24 23:46:42] 2025-11-25 04:46:11,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:46:42] 2025-11-25 04:46:11,433 | INFO     | ***************************************
[2025-11-24 23:46:42] 2025-11-25 04:46:11,434 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:46:42] 2025-11-25 04:46:11,434 | INFO     | ***************************************
[2025-11-24 23:46:42] 2025-11-25 04:46:11,434 | INFO     | 
[2025-11-24 23:46:42] 2025-11-25 04:46:11,442 | INFO     | architecture information:
[2025-11-24 23:46:42] 2025-11-25 04:46:11,451 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:46:42] 2025-11-25 04:46:11,472 | INFO     | cat /etc/os-release:
[2025-11-24 23:46:42] NAME="CentOS Linux"
[2025-11-24 23:46:42] VERSION="7 (Core)"
[2025-11-24 23:46:42] ID="centos"
[2025-11-24 23:46:42] ID_LIKE="rhel fedora"
[2025-11-24 23:46:42] VERSION_ID="7"
[2025-11-24 23:46:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:46:42] ANSI_COLOR="0;31"
[2025-11-24 23:46:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:46:42] HOME_URL="https://www.centos.org/"
[2025-11-24 23:46:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:46:42] 
[2025-11-24 23:46:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:46:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:46:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:46:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:46:42] 
[2025-11-24 23:46:42] 2025-11-25 04:46:11,473 | INFO     | ***************************************
[2025-11-24 23:46:42] 2025-11-25 04:46:11,978 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-24 23:46:42] 2025-11-25 04:46:12,054 | INFO     | sufficient remaining disk space (81769005056 B)
[2025-11-24 23:46:42] 2025-11-25 04:46:12,054 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:46:42] 2025-11-25 04:46:12,054 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:46:42] 2025-11-25 04:46:12,054 | INFO     | update_server=False
[2025-11-24 23:46:42] 2025-11-25 04:46:12,054 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:46:42] 2025-11-25 04:46:12,055 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:46:42] 2025-11-25 04:46:12,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:46:42] 2025-11-25 04:46:12,205 | INFO     | all data control threads have been joined
[2025-11-24 23:46:42] 2025-11-25 04:46:12,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:46:42] 2025-11-25 04:46:12,809 | INFO     | aborting loop
[2025-11-24 23:46:42] 2025-11-25 04:46:13,038 | INFO     | all payload control threads have been joined
[2025-11-24 23:46:42] 2025-11-25 04:46:13,061 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,211 | INFO     | [data] control thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,305 | INFO     | [job] validate thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,430 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,539 | INFO     | all job control threads have been joined
[2025-11-24 23:46:42] 2025-11-25 04:46:13,568 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,767 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,815 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:13,887 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,044 | INFO     | [payload] control thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,078 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:46:42] 2025-11-25 04:46:14,434 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,507 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:14,545 | INFO     | [job] control thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:15,421 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:16,069 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:46:42] 2025-11-25 04:46:20,050 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:46:42] 2025-11-25 04:46:20,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995657119552)>', '<ExcThread(monitor, started 139995314640640)>']
[2025-11-24 23:46:42] 2025-11-25 04:46:25,336 | INFO     | all workflow threads have been joined
[2025-11-24 23:46:42] 2025-11-25 04:46:25,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:46:42] 2025-11-25 04:46:25,337 | INFO     | traces error code: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:25,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:46:42] 2025-11-25 04:46:41,912 | INFO     | PID=1238859 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:46:42] 2025-11-25 04:46:41,912 | INFO     | .. there are 11 such processes running
[2025-11-24 23:46:42] 2025-11-25 04:46:41,913 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:46:42] 2025-11-25 04:46:41,913 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:46:42] 2025-11-25 04:46:41,913 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:46:42] 2025-11-25 04:46:41,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:46:42] 2025-11-25 04:46:41,913 | INFO     | [monitor] control thread has ended
[2025-11-24 23:46:42] 2025-11-25 04:46:42,092 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:46:42] 2025-11-25 04:46:42,114 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:46:42] 2025-11-25 04:46:42,120 [wrapper] pilotpid: 1238859
[2025-11-24 23:46:42] 2025-11-25 04:46:42,124 [wrapper] Pilot exit status: 0
[2025-11-24 23:46:42] 2025-11-25 04:46:42,137 [wrapper] pandaids: 6895368120
[2025-11-24 23:46:42] 2025-11-25 04:46:42,204 [wrapper] cleanup supervisor_pilot 3497878 1238860
[2025-11-24 23:46:42] 2025-11-25 04:46:42,207 [wrapper] Test setup, not cleaning
[2025-11-24 23:46:42] 2025-11-25 04:46:42,211 [wrapper] apfmon messages muted
[2025-11-24 23:46:42] 2025-11-25 04:46:42,214 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:46:42] 2025-11-25 04:46:42,217 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:46:42]  *** Error codes and diagnostics ***
[2025-11-24 23:46:42]     "exeErrorCode": 0,
[2025-11-24 23:46:42]     "exeErrorDiag": "",
[2025-11-24 23:46:42]     "pilotErrorCode": 0,
[2025-11-24 23:46:42]     "pilotErrorDiag": "",
[2025-11-24 23:46:42]  *** Listing of results directory ***
[2025-11-24 23:46:42] total 1320332
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 14:15 pilot3.tar.gz
[2025-11-24 23:46:42] -rwx------. 1 boincer umatlas     36292 Nov 23 14:21 runpilot2-wrapper.sh
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 14:21 queuedata.json
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:46:42] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas 410010993 Nov 24 00:02 EVNT.47483658._001187.pool.root.1
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:46:42] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:02 input.tar.gz
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:02 pandaJob.out
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-24 23:46:42] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas       533 Nov 24 23:37 boinc_task_state.xml
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas 911013482 Nov 24 23:45 HITS.47556149._001738.pool.root.1
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas      1051 Nov 24 23:45 memory_monitor_summary.json
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas   1516227 Nov 24 23:45 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas   2458863 Nov 24 23:45 log.47556149._001738.job.log.tgz.1
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas        95 Nov 24 23:45 pilot_heartbeat.json
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas      6902 Nov 24 23:45 init_data.xml
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas      8579 Nov 24 23:46 heartbeat.json
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 23:46 boinc_mmap_file
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas        29 Nov 24 23:46 wrapper_checkpoint.txt
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas       823 Nov 24 23:46 pilotlog.txt
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas  11080558 Nov 24 23:46 log.47556149._001738.job.log.1
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas       353 Nov 24 23:46 output.list
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas       620 Nov 24 23:46 runtime_log
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas  13557760 Nov 24 23:46 result.tar.gz
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas       661 Nov 24 23:46 TWyNDmopUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm18KKDmuHYKfm.diag
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas      9343 Nov 24 23:46 runtime_log.err
[2025-11-24 23:46:42] -rw-r--r--. 1 boincer umatlas     21139 Nov 24 23:46 stderr.txt
[2025-11-24 23:46:42] HITS file was successfully produced:
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas 911013482 Nov 24 23:45 shared/HITS.pool.root.1
[2025-11-24 23:46:42]  *** Contents of shared directory: ***
[2025-11-24 23:46:42] total 1303912
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas 410010993 Nov 24 00:02 ATLAS.root_0
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-24 23:46:42] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 00:02 input.tar.gz
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas 911013482 Nov 24 23:45 HITS.pool.root.1
[2025-11-24 23:46:42] -rw-------. 1 boincer umatlas  13557760 Nov 24 23:46 result.tar.gz
23:46:44 (1228772): run_atlas exited; CPU time 198816.731952
23:46:44 (1228772): called boinc_finish(0)

</stderr_txt>
]]>

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