Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:19:32 (3043278): wrapper (7.7.26015): starting
12:19:32 (3043278): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 12:19:32] Arguments: --nthreads 8
[2025-11-24 12:19:32] Threads: 8
[2025-11-24 12:19:32] Checking for CVMFS
[2025-11-24 12:19:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 12:19:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 12:19:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 12:19:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 12:19:33] 2.13.3.0 9366 27415 332908 153254 3 125 23234315 32935936 23022 16776704 0 186999443 99.816 88652668 33156 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 12:19:33] CVMFS is ok
[2025-11-24 12:19:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 12:19:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 12:19:33] Further information can be found at the LHC@home message board.
[2025-11-24 12:19:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 12:19:33] Checking for apptainer binary...
[2025-11-24 12:19:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 12:19:33] Running /usr/bin/apptainer --version
[2025-11-24 12:19:33] apptainer version 1.4.4-1.el9
[2025-11-24 12:19:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 12:19:34] c-6-2.aglt2.org
[2025-11-24 12:19:34] apptainer works
[2025-11-24 12:19:34] Set ATHENA_PROC_NUMBER=8
[2025-11-24 12:19:34] Set ATHENA_CORE_NUMBER=8
[2025-11-24 12:19:34] Starting ATLAS job with PandaID=6895356031
[2025-11-24 12:19:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:37:04]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:37:04] 2025-11-25 18:36:15,182 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 13:37:04] 2025-11-25 18:36:15,188 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.942775
[2025-11-25 13:37:04] 2025-11-25 18:36:15,194 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895356031/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,195 | INFO     | extracted standard info from prmon json
[2025-11-25 13:37:04] 2025-11-25 18:36:15,195 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:37:04] 2025-11-25 18:36:15,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:37:04] 2025-11-25 18:36:15,223 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:37:04] 2025-11-25 18:36:15,225 | INFO     | sum of square deviations: 1025724546895.0153
[2025-11-25 13:37:04] 2025-11-25 18:36:15,279 | INFO     | sum of deviations: 4071420089283.7344
[2025-11-25 13:37:04] 2025-11-25 18:36:15,280 | INFO     | mean x: 1764050313.9315436
[2025-11-25 13:37:04] 2025-11-25 18:36:15,280 | INFO     | mean y: 2998855.722818792
[2025-11-25 13:37:04] 2025-11-25 18:36:15,280 | INFO     | intersect: -6999066083.046045
[2025-11-25 13:37:04] 2025-11-25 18:36:15,282 | INFO     | chi2: 8.545957931478497
[2025-11-25 13:37:04] 2025-11-25 18:36:15,284 | INFO     | sum of square deviations: 1015433571927.2365
[2025-11-25 13:37:04] 2025-11-25 18:36:15,339 | INFO     | sum of deviations: 4606936750723.471
[2025-11-25 13:37:04] 2025-11-25 18:36:15,343 | INFO     | mean x: 1764050161.4363637
[2025-11-25 13:37:04] 2025-11-25 18:36:15,343 | INFO     | mean y: 3006791.0579124577
[2025-11-25 13:37:04] 2025-11-25 18:36:15,344 | INFO     | intersect: -8000340491.83378
[2025-11-25 13:37:04] 2025-11-25 18:36:15,346 | INFO     | chi2: 5.253244117167122
[2025-11-25 13:37:04] 2025-11-25 18:36:15,346 | INFO     | current chi2=5.253244117167122 (change=38.52948774979188 %)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,348 | INFO     | sum of square deviations: 1005211668021.8855
[2025-11-25 13:37:04] 2025-11-25 18:36:15,454 | INFO     | sum of deviations: 4887070355208.622
[2025-11-25 13:37:04] 2025-11-25 18:36:15,454 | INFO     | mean x: 1764050008.9412162
[2025-11-25 13:37:04] 2025-11-25 18:36:15,455 | INFO     | mean y: 3010966.4439189187
[2025-11-25 13:37:04] 2025-11-25 18:36:15,455 | INFO     | intersect: -8573328503.199429
[2025-11-25 13:37:04] 2025-11-25 18:36:15,457 | INFO     | chi2: 4.03262749411157
[2025-11-25 13:37:04] 2025-11-25 18:36:15,457 | INFO     | current chi2=4.03262749411157 (change=23.235482605247455 %)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,457 | INFO     | right removable region: 1479
[2025-11-25 13:37:04] 2025-11-25 18:36:15,459 | INFO     | sum of square deviations: 1015432270797.2352
[2025-11-25 13:37:04] 2025-11-25 18:36:15,577 | INFO     | sum of deviations: 3534201622333.986
[2025-11-25 13:37:04] 2025-11-25 18:36:15,578 | INFO     | mean x: 1764050466.4363637
[2025-11-25 13:37:04] 2025-11-25 18:36:15,578 | INFO     | mean y: 3006812.989225589
[2025-11-25 13:37:04] 2025-11-25 18:36:15,578 | INFO     | intersect: -6136752774.7808075
[2025-11-25 13:37:04] 2025-11-25 18:36:15,580 | INFO     | chi2: 5.412558723457083
[2025-11-25 13:37:04] 2025-11-25 18:36:15,580 | INFO     | current chi2=5.412558723457083 (change=36.66527770374034 %)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,587 | INFO     | sum of square deviations: 1005209246813.6481
[2025-11-25 13:37:04] 2025-11-25 18:36:15,633 | INFO     | monitor loop #5634: job 0:6895356031 is in state 'finished'
[2025-11-25 13:37:04] 2025-11-25 18:36:15,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,649 | INFO     | time since job start (90960s) is within the limit (172800.0s)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,651 | INFO     | sum of deviations: 3379835372988.1147
[2025-11-25 13:37:04] 2025-11-25 18:36:15,651 | INFO     | mean x: 1764050618.9398649
[2025-11-25 13:37:04] 2025-11-25 18:36:15,651 | INFO     | mean y: 3009114.0574324327
[2025-11-25 13:37:04] 2025-11-25 18:36:15,651 | INFO     | intersect: -5928293946.010659
[2025-11-25 13:37:04] 2025-11-25 18:36:15,653 | INFO     | chi2: 5.182823332142835
[2025-11-25 13:37:04] 2025-11-25 18:36:15,653 | INFO     | current chi2=5.182823332142835 (change=4.244487737724032 %)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,653 | INFO     | left removable region: 20
[2025-11-25 13:37:04] 2025-11-25 18:36:15,655 | INFO     | sum of square deviations: 963024552397.6426
[2025-11-25 13:37:04] 2025-11-25 18:36:15,710 | INFO     | sum of deviations: 4069465582688.07
[2025-11-25 13:37:04] 2025-11-25 18:36:15,711 | INFO     | mean x: 1764050588.4537354
[2025-11-25 13:37:04] 2025-11-25 18:36:15,711 | INFO     | mean y: 3023904.9047292667
[2025-11-25 13:37:04] 2025-11-25 18:36:15,711 | INFO     | intersect: -7451347988.273066
[2025-11-25 13:37:04] 2025-11-25 18:36:15,713 | INFO     | chi2: 0.5780742523386925
[2025-11-25 13:37:04] 2025-11-25 18:36:15,713 | INFO     | current memory leak: 4.23 B/s (using 1459 data points, chi2=0.58)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | could have reported an average CPU frequency of 2599 MHz (53 samples)
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | ..............................
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | . Timing measurements:
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | . get job = 0 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | . initial setup = 4 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | . payload setup = 25 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,715 | INFO     | . stage-in = 0 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,716 | INFO     | . payload execution = 90873 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,716 | INFO     | . stage-out = 6 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,716 | INFO     | . log creation = 1 s
[2025-11-25 13:37:04] 2025-11-25 18:36:15,716 | INFO     | ..............................
[2025-11-25 13:37:04] 2025-11-25 18:36:16,077 | INFO     | 
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | job summary report
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | --------------------------------------------------
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | PanDA job id: 6895356031
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | task id: 47556137
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | errors: (none)
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:37:04] 2025-11-25 18:36:16,078 | INFO     | pilot state: finished 
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | transexitcode: 0
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | exeerrorcode: 0
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | exeerrordiag: 
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | exitcode: 0
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | exitmsg: OK
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | cpuconsumptiontime: 306649 s
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | nevents: 1000
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | neventsw: 0
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | pid: 3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:16,079 | INFO     | pgrp: 3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | corecount: 8
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | event service: False
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | sizes: {0: 2284032, 1: 2284116, 2: 2284287, 3: 2284315, 14: 2284343, 22: 2284633, 25: 2284789, 90902: 2352360, 90909: 2361359, 90910: 2361415, 90921: 2361757}
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | --------------------------------------------------
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | 
[2025-11-25 13:37:04] 2025-11-25 18:36:16,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 13:37:04] 2025-11-25 18:36:16,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:37:04] 2025-11-25 18:36:16,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,103 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:37:04] 2025-11-25 18:36:16,103 | INFO     | job 6895356031 has completed (purged errors)
[2025-11-25 13:37:04] 2025-11-25 18:36:16,103 | INFO     | overall cleanup function is called
[2025-11-25 13:37:04] 2025-11-25 18:36:17,120 | INFO     | --- collectZombieJob: --- 10, [3064836]
[2025-11-25 13:37:04] 2025-11-25 18:36:17,120 | INFO     | zombie collector waiting for pid 3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:17,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:37:04] 2025-11-25 18:36:17,120 | INFO     | collected zombie processes
[2025-11-25 13:37:04] 2025-11-25 18:36:17,121 | INFO     | will attempt to kill all subprocesses of pid=3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:17,701 | INFO     | process IDs to be killed: [3064836] (in reverse order)
[2025-11-25 13:37:04] 2025-11-25 18:36:17,846 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:37:04] 2025-11-25 18:36:17,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:37:04] 2025-11-25 18:36:17,862 | INFO     | did not find any defunct processes belonging to 3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:17,877 | INFO     | did not find any defunct processes belonging to 3064836
[2025-11-25 13:37:04] 2025-11-25 18:36:17,878 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:37:04] 2025-11-25 18:36:17,878 | INFO     | ready for new job
[2025-11-25 13:37:04] 2025-11-25 18:36:17,879 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:37:04] 2025-11-25 18:36:17,885 | INFO     | ***************************************
[2025-11-25 13:37:04] 2025-11-25 18:36:17,885 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:37:04] 2025-11-25 18:36:17,886 | INFO     | ***************************************
[2025-11-25 13:37:04] 2025-11-25 18:36:17,886 | INFO     | 
[2025-11-25 13:37:04] 2025-11-25 18:36:17,887 | INFO     | architecture information:
[2025-11-25 13:37:04] 2025-11-25 18:36:17,888 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:37:04] 2025-11-25 18:36:17,904 | INFO     | cat /etc/os-release:
[2025-11-25 13:37:04] NAME="CentOS Linux"
[2025-11-25 13:37:04] VERSION="7 (Core)"
[2025-11-25 13:37:04] ID="centos"
[2025-11-25 13:37:04] ID_LIKE="rhel fedora"
[2025-11-25 13:37:04] VERSION_ID="7"
[2025-11-25 13:37:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:37:04] ANSI_COLOR="0;31"
[2025-11-25 13:37:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:37:04] HOME_URL="https://www.centos.org/"
[2025-11-25 13:37:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:37:04] 
[2025-11-25 13:37:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:37:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:37:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:37:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:37:04] 
[2025-11-25 13:37:04] 2025-11-25 18:36:17,904 | INFO     | ***************************************
[2025-11-25 13:37:04] 2025-11-25 18:36:18,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 13:37:04] 2025-11-25 18:36:18,445 | INFO     | sufficient remaining disk space (71740424192 B)
[2025-11-25 13:37:04] 2025-11-25 18:36:18,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:37:04] 2025-11-25 18:36:18,446 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:37:04] 2025-11-25 18:36:18,446 | INFO     | update_server=False
[2025-11-25 13:37:04] 2025-11-25 18:36:18,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:37:04] 2025-11-25 18:36:19,093 | INFO     | all data control threads have been joined
[2025-11-25 13:37:04] 2025-11-25 18:36:19,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:37:04] 2025-11-25 18:36:19,145 | INFO     | aborting loop
[2025-11-25 13:37:04] 2025-11-25 18:36:19,296 | INFO     | all job control threads have been joined
[2025-11-25 13:37:04] 2025-11-25 18:36:19,451 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,632 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,669 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,713 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,747 | INFO     | all payload control threads have been joined
[2025-11-25 13:37:04] 2025-11-25 18:36:19,780 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,790 | INFO     | [job] validate thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:19,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:37:04] 2025-11-25 18:36:19,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,103 | INFO     | [data] control thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,151 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,302 | INFO     | [job] control thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,480 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,503 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:37:04] 2025-11-25 18:36:20,752 | INFO     | [payload] control thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:20,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:37:04] 2025-11-25 18:36:21,856 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:21,891 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:24,697 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:37:04] 2025-11-25 18:36:49,425 | INFO     | PID=3051783 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:37:04] 2025-11-25 18:36:49,425 | INFO     | .. there are 41 such processes running
[2025-11-25 13:37:04] 2025-11-25 18:36:49,426 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:37:04] 2025-11-25 18:36:49,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:37:04] 2025-11-25 18:36:49,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:37:04] 2025-11-25 18:36:56,750 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:37:04] 2025-11-25 18:36:58,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631677810496)>', '<ExcThread(monitor, started 140631028516608)>']
[2025-11-25 13:37:04] 2025-11-25 18:36:58,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:37:04] 2025-11-25 18:36:58,494 | INFO     | [monitor] control thread has ended
[2025-11-25 13:37:04] 2025-11-25 18:37:03,457 | INFO     | all workflow threads have been joined
[2025-11-25 13:37:04] 2025-11-25 18:37:03,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:37:04] 2025-11-25 18:37:03,480 | INFO     | traces error code: 0
[2025-11-25 13:37:04] 2025-11-25 18:37:03,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:37:04] 2025-11-25 18:37:03,693 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:37:04] 2025-11-25 18:37:03,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:37:04] 2025-11-25 18:37:03,700 [wrapper] pilotpid: 3051783
[2025-11-25 13:37:04] 2025-11-25 18:37:03,703 [wrapper] Pilot exit status: 0
[2025-11-25 13:37:04] 2025-11-25 18:37:03,726 [wrapper] pandaids: 6895356031
[2025-11-25 13:37:04] 2025-11-25 18:37:03,813 [wrapper] cleanup supervisor_pilot 3440150 3051784
[2025-11-25 13:37:04] 2025-11-25 18:37:03,817 [wrapper] Test setup, not cleaning
[2025-11-25 13:37:04] 2025-11-25 18:37:03,820 [wrapper] apfmon messages muted
[2025-11-25 13:37:04] 2025-11-25 18:37:03,864 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:37:04] 2025-11-25 18:37:03,892 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:37:04]  *** Error codes and diagnostics ***
[2025-11-25 13:37:04]     "exeErrorCode": 0,
[2025-11-25 13:37:04]     "exeErrorDiag": "",
[2025-11-25 13:37:04]     "pilotErrorCode": 0,
[2025-11-25 13:37:04]     "pilotErrorDiag": "",
[2025-11-25 13:37:04]  *** Listing of results directory ***
[2025-11-25 13:37:04] total 1327548
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-25 13:37:04] -rwx------. 1 boincer umatlas     36292 Nov 23 05:12 runpilot2-wrapper.sh
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:12 queuedata.json
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas       100 Nov 24 12:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:37:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 12:19 run_atlas
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas       105 Nov 24 12:19 job.xml
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas 409993095 Nov 24 12:19 EVNT.47483658._000686.pool.root.1
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 12:19 start_atlas.sh
[2025-11-25 13:37:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 12:19 shared
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 12:19 input.tar.gz
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas         0 Nov 24 12:19 boinc_lockfile
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 12:19 pandaJob.out
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas        57 Nov 24 12:19 setup.sh.local
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas    991801 Nov 24 12:20 agis_schedconf.cvmfs.json
[2025-11-25 13:37:04] drwx------. 5 boincer umatlas      4096 Nov 24 12:20 pilot3
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas       533 Nov 25 13:18 boinc_task_state.xml
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas      6655 Nov 25 13:30 init_data.xml
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas 917150576 Nov 25 13:34 HITS.47556137._006814.pool.root.1
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas      1068 Nov 25 13:35 memory_monitor_summary.json
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas   1516240 Nov 25 13:36 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas   2511238 Nov 25 13:36 log.47556137._006814.job.log.tgz.1
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas      8629 Nov 25 13:36 heartbeat.json
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas        95 Nov 25 13:36 pilot_heartbeat.json
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas      4824 Nov 25 13:37 pilotlog.txt
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas  11658222 Nov 25 13:37 log.47556137._006814.job.log.1
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 13:37 boinc_mmap_file
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas        29 Nov 25 13:37 wrapper_checkpoint.txt
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas       353 Nov 25 13:37 output.list
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas       620 Nov 25 13:37 runtime_log
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas  14192640 Nov 25 13:37 result.tar.gz
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas      9328 Nov 25 13:37 runtime_log.err
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas       661 Nov 25 13:37 K6TKDmqFMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0mKKDmgtebyn.diag
[2025-11-25 13:37:04] -rw-r--r--. 1 boincer umatlas     21366 Nov 25 13:37 stderr.txt
[2025-11-25 13:37:04] HITS file was successfully produced:
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas 917150576 Nov 25 13:34 shared/HITS.pool.root.1
[2025-11-25 13:37:04]  *** Contents of shared directory: ***
[2025-11-25 13:37:04] total 1310504
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas 409993095 Nov 24 12:19 ATLAS.root_0
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 12:19 start_atlas.sh
[2025-11-25 13:37:04] -rw-r--r--. 2 boincer umatlas    590098 Nov 24 12:19 input.tar.gz
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas 917150576 Nov 25 13:34 HITS.pool.root.1
[2025-11-25 13:37:04] -rw-------. 1 boincer umatlas  14192640 Nov 25 13:37 result.tar.gz
13:37:06 (3043278): run_atlas exited; CPU time 309458.869730
13:37:06 (3043278): called boinc_finish(0)

</stderr_txt>
]]>

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