Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:30:53 (1136937): wrapper (7.7.26015): starting
05:30:53 (1136937): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:30:53] Arguments: --nthreads 8
[2025-11-24 05:30:53] Threads: 8
[2025-11-24 05:30:53] Checking for CVMFS
[2025-11-24 05:30:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:30:56] 2.13.3.0 11600 27005 335888 153242 1 350 18608705 32935937 18993 16776704 0 110107549 99.617 104746071 38681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 05:30:56] CVMFS is ok
[2025-11-24 05:30:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:30:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:30:56] Further information can be found at the LHC@home message board.
[2025-11-24 05:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:30:56] Checking for apptainer binary...
[2025-11-24 05:30:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:30:56] Running /usr/bin/apptainer --version
[2025-11-24 05:30:56] apptainer version 1.4.4-1.el9
[2025-11-24 05:30:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:30:56] c6-2-29-4.aglt2.org
[2025-11-24 05:30:56] apptainer works
[2025-11-24 05:30:56] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:30:56] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:30:57] Starting ATLAS job with PandaID=6895356049
[2025-11-24 05:30:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:01:59]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:01:59] 2025-11-24 23:01:01,011 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 18:01:59] 2025-11-24 23:01:01,021 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2971.3517857142847
[2025-11-24 18:01:59] 2025-11-24 23:01:01,030 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895356049/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,031 | INFO     | extracted standard info from prmon json
[2025-11-24 18:01:59] 2025-11-24 23:01:01,031 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:01:59] 2025-11-24 23:01:01,031 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:01:59] 2025-11-24 23:01:01,043 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:01:59] 2025-11-24 23:01:01,044 | INFO     | sum of square deviations: 123616964198.71608
[2025-11-24 18:01:59] 2025-11-24 23:01:01,054 | INFO     | sum of deviations: 1180551427357.4492
[2025-11-24 18:01:59] 2025-11-24 23:01:01,054 | INFO     | mean x: 1764002816.1182065
[2025-11-24 18:01:59] 2025-11-24 23:01:01,055 | INFO     | mean y: 2892675.339673913
[2025-11-24 18:01:59] 2025-11-24 23:01:01,055 | INFO     | intersect: -16843468630.567059
[2025-11-24 18:01:59] 2025-11-24 23:01:01,055 | INFO     | chi2: 7.562601675237824
[2025-11-24 18:01:59] 2025-11-24 23:01:01,056 | INFO     | sum of square deviations: 121115516656.3475
[2025-11-24 18:01:59] 2025-11-24 23:01:01,066 | INFO     | sum of deviations: 1436969447007.7458
[2025-11-24 18:01:59] 2025-11-24 23:01:01,066 | INFO     | mean x: 1764002663.6497948
[2025-11-24 18:01:59] 2025-11-24 23:01:01,067 | INFO     | mean y: 2908304.3036935707
[2025-11-24 18:01:59] 2025-11-24 23:01:01,067 | INFO     | intersect: -20926019731.37744
[2025-11-24 18:01:59] 2025-11-24 23:01:01,067 | INFO     | chi2: 4.231708673090548
[2025-11-24 18:01:59] 2025-11-24 23:01:01,068 | INFO     | current chi2=4.231708673090548 (change=44.0442739838275 %)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,068 | INFO     | sum of square deviations: 118648025167.3622
[2025-11-24 18:01:59] 2025-11-24 23:01:01,078 | INFO     | sum of deviations: 1523470278875.5344
[2025-11-24 18:01:59] 2025-11-24 23:01:01,078 | INFO     | mean x: 1764002511.1804407
[2025-11-24 18:01:59] 2025-11-24 23:01:01,078 | INFO     | mean y: 2913641.0798898074
[2025-11-24 18:01:59] 2025-11-24 23:01:01,078 | INFO     | intersect: -22647319212.39084
[2025-11-24 18:01:59] 2025-11-24 23:01:01,079 | INFO     | chi2: 3.6557835179668765
[2025-11-24 18:01:59] 2025-11-24 23:01:01,079 | INFO     | current chi2=3.6557835179668765 (change=13.609754347835468 %)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,080 | INFO     | right removable region: 725
[2025-11-24 18:01:59] 2025-11-24 23:01:01,080 | INFO     | sum of square deviations: 121113443266.34755
[2025-11-24 18:01:59] 2025-11-24 23:01:01,090 | INFO     | sum of deviations: 917961975671.0443
[2025-11-24 18:01:59] 2025-11-24 23:01:01,090 | INFO     | mean x: 1764002968.6497948
[2025-11-24 18:01:59] 2025-11-24 23:01:01,090 | INFO     | mean y: 2908665.300957592
[2025-11-24 18:01:59] 2025-11-24 23:01:01,090 | INFO     | intersect: -13367098879.033194
[2025-11-24 18:01:59] 2025-11-24 23:01:01,091 | INFO     | chi2: 4.312451214339615
[2025-11-24 18:01:59] 2025-11-24 23:01:01,091 | INFO     | current chi2=4.312451214339615 (change=42.97661837116392 %)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,092 | INFO     | sum of square deviations: 118644412804.83324
[2025-11-24 18:01:59] 2025-11-24 23:01:01,102 | INFO     | sum of deviations: 843162016758.3339
[2025-11-24 18:01:59] 2025-11-24 23:01:01,102 | INFO     | mean x: 1764003121.1666667
[2025-11-24 18:01:59] 2025-11-24 23:01:01,102 | INFO     | mean y: 2913277.129476584
[2025-11-24 18:01:59] 2025-11-24 23:01:01,102 | INFO     | intersect: -12533205314.965677
[2025-11-24 18:01:59] 2025-11-24 23:01:01,103 | INFO     | chi2: 4.0402977524581125
[2025-11-24 18:01:59] 2025-11-24 23:01:01,103 | INFO     | current chi2=4.0402977524581125 (change=6.31087630572021 %)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,103 | INFO     | left removable region: 20
[2025-11-24 18:01:59] 2025-11-24 23:01:01,104 | INFO     | sum of square deviations: 108644734490.04262
[2025-11-24 18:01:59] 2025-11-24 23:01:01,113 | INFO     | sum of deviations: 1125002957377.086
[2025-11-24 18:01:59] 2025-11-24 23:01:01,114 | INFO     | mean x: 1764003090.744681
[2025-11-24 18:01:59] 2025-11-24 23:01:01,114 | INFO     | mean y: 2939265.889361702
[2025-11-24 18:01:59] 2025-11-24 23:01:01,114 | INFO     | intersect: -18263097309.42178
[2025-11-24 18:01:59] 2025-11-24 23:01:01,115 | INFO     | chi2: 0.052189294289090596
[2025-11-24 18:01:59] 2025-11-24 23:01:01,115 | INFO     | current memory leak: 10.35 B/s (using 705 data points, chi2=0.05)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | could have reported an average CPU frequency of 2891 MHz (28 samples)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | ..............................
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | . Timing measurements:
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | . get job = 0 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | . initial setup = 4 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | . payload setup = 29 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,116 | INFO     | . stage-in = 0 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,117 | INFO     | . payload execution = 44872 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,117 | INFO     | . stage-out = 3 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,117 | INFO     | . log creation = 0 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,117 | INFO     | ..............................
[2025-11-24 18:01:59] 2025-11-24 23:01:01,202 | INFO     | 
[2025-11-24 18:01:59] 2025-11-24 23:01:01,202 | INFO     | job summary report
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | --------------------------------------------------
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | PanDA job id: 6895356049
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | task id: 47556149
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | errors: (none)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | pilot state: finished 
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | transexitcode: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | exeerrorcode: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | exeerrordiag: 
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | exitcode: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | exitmsg: OK
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | cpuconsumptiontime: 234379 s
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | nevents: 1000
[2025-11-24 18:01:59] 2025-11-24 23:01:01,203 | INFO     | neventsw: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | pid: 1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | pgrp: 1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | corecount: 8
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | event service: False
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | sizes: {0: 2298579, 1: 2298778, 2: 2298778, 12: 2298806, 18: 2299096, 23: 2299124, 44905: 2345951, 44909: 2355736, 44912: 2355792, 44921: 2356038}
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | --------------------------------------------------
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | 
[2025-11-24 18:01:59] 2025-11-24 23:01:01,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 18:01:59] 2025-11-24 23:01:01,224 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | job 6895356049 has completed (purged errors)
[2025-11-24 18:01:59] 2025-11-24 23:01:01,226 | INFO     | overall cleanup function is called
[2025-11-24 18:01:59] 2025-11-24 23:01:02,242 | INFO     | --- collectZombieJob: --- 10, [1150875]
[2025-11-24 18:01:59] 2025-11-24 23:01:02,242 | INFO     | zombie collector waiting for pid 1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:02,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:01:59] 2025-11-24 23:01:02,242 | INFO     | collected zombie processes
[2025-11-24 18:01:59] 2025-11-24 23:01:02,242 | INFO     | will attempt to kill all subprocesses of pid=1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:02,679 | INFO     | process IDs to be killed: [1150875] (in reverse order)
[2025-11-24 18:01:59] 2025-11-24 23:01:02,813 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:01:59] 2025-11-24 23:01:02,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:01:59] 2025-11-24 23:01:02,827 | INFO     | did not find any defunct processes belonging to 1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:02,840 | INFO     | did not find any defunct processes belonging to 1150875
[2025-11-24 18:01:59] 2025-11-24 23:01:02,841 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:01:59] 2025-11-24 23:01:02,841 | INFO     | ready for new job
[2025-11-24 18:01:59] 2025-11-24 23:01:02,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:01:59] 2025-11-24 23:01:02,845 | INFO     | ***************************************
[2025-11-24 18:01:59] 2025-11-24 23:01:02,845 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:01:59] 2025-11-24 23:01:02,845 | INFO     | ***************************************
[2025-11-24 18:01:59] 2025-11-24 23:01:02,845 | INFO     | 
[2025-11-24 18:01:59] 2025-11-24 23:01:02,849 | INFO     | architecture information:
[2025-11-24 18:01:59] 2025-11-24 23:01:02,849 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:01:59] 2025-11-24 23:01:02,918 | INFO     | cat /etc/os-release:
[2025-11-24 18:01:59] NAME="CentOS Linux"
[2025-11-24 18:01:59] VERSION="7 (Core)"
[2025-11-24 18:01:59] ID="centos"
[2025-11-24 18:01:59] ID_LIKE="rhel fedora"
[2025-11-24 18:01:59] VERSION_ID="7"
[2025-11-24 18:01:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:01:59] ANSI_COLOR="0;31"
[2025-11-24 18:01:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:01:59] HOME_URL="https://www.centos.org/"
[2025-11-24 18:01:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:01:59] 
[2025-11-24 18:01:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:01:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:01:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:01:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:01:59] 
[2025-11-24 18:01:59] 2025-11-24 23:01:02,919 | INFO     | ***************************************
[2025-11-24 18:01:59] 2025-11-24 23:01:03,422 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 18:01:59] 2025-11-24 23:01:03,500 | INFO     | sufficient remaining disk space (72748105728 B)
[2025-11-24 18:01:59] 2025-11-24 23:01:03,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:01:59] 2025-11-24 23:01:03,501 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:01:59] 2025-11-24 23:01:03,501 | INFO     | update_server=False
[2025-11-24 18:01:59] 2025-11-24 23:01:03,501 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:01:59] 2025-11-24 23:01:03,646 | INFO     | all payload control threads have been joined
[2025-11-24 18:01:59] 2025-11-24 23:01:03,726 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 18:01:59] 2025-11-24 23:01:03,726 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 18:01:59] 2025-11-24 23:01:03,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:01:59] 2025-11-24 23:01:03,726 | INFO     | will abort loop
[2025-11-24 18:01:59] 2025-11-24 23:01:03,839 | INFO     | all job control threads have been joined
[2025-11-24 18:01:59] 2025-11-24 23:01:04,343 | INFO     | all data control threads have been joined
[2025-11-24 18:01:59] 2025-11-24 23:01:04,514 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:04,535 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:04,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:01:59] 2025-11-24 23:01:04,663 | INFO     | [payload] control thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:04,732 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:04,845 | INFO     | [job] control thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,071 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,349 | INFO     | [data] control thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,543 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,625 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:05,713 | INFO     | [job] validate thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:06,064 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:06,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:01:59] 2025-11-24 23:01:06,666 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:06,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:01:59] 2025-11-24 23:01:07,222 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:10,985 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:01:59] 2025-11-24 23:01:33,197 | INFO     | PID=1140712 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 18:01:59] 2025-11-24 23:01:33,197 | INFO     | .. there are 29 such processes running
[2025-11-24 18:01:59] 2025-11-24 23:01:33,198 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:01:59] 2025-11-24 23:01:33,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:01:59] 2025-11-24 23:01:33,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:01:59] 2025-11-24 23:01:35,015 [wrapper] supervise_pilot (15 min periods counter: 51)
[2025-11-24 18:01:59] 2025-11-24 23:01:52,560 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:01:59] 2025-11-24 23:01:53,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107932620608)>', '<ExcThread(monitor, started 140106925074176)>']
[2025-11-24 18:01:59] 2025-11-24 23:01:54,333 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:01:59] 2025-11-24 23:01:54,333 | INFO     | [monitor] control thread has ended
[2025-11-24 18:01:59] 2025-11-24 23:01:58,729 | INFO     | all workflow threads have been joined
[2025-11-24 18:01:59] 2025-11-24 23:01:58,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:01:59] 2025-11-24 23:01:58,730 | INFO     | traces error code: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:58,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:01:59] 2025-11-24 23:01:59,045 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:01:59] 2025-11-24 23:01:59,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:01:59] 2025-11-24 23:01:59,070 [wrapper] pilotpid: 1140712
[2025-11-24 18:01:59] 2025-11-24 23:01:59,073 [wrapper] Pilot exit status: 0
[2025-11-24 18:01:59] 2025-11-24 23:01:59,114 [wrapper] pandaids: 6895356049
[2025-11-24 18:01:59] 2025-11-24 23:01:59,205 [wrapper] cleanup supervisor_pilot 3338713 1140713
[2025-11-24 18:01:59] 2025-11-24 23:01:59,215 [wrapper] Test setup, not cleaning
[2025-11-24 18:01:59] 2025-11-24 23:01:59,219 [wrapper] apfmon messages muted
[2025-11-24 18:01:59] 2025-11-24 23:01:59,224 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:01:59] 2025-11-24 23:01:59,227 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:01:59]  *** Error codes and diagnostics ***
[2025-11-24 18:01:59]     "exeErrorCode": 0,
[2025-11-24 18:01:59]     "exeErrorDiag": "",
[2025-11-24 18:01:59]     "pilotErrorCode": 0,
[2025-11-24 18:01:59]     "pilotErrorDiag": "",
[2025-11-24 18:01:59]  *** Listing of results directory ***
[2025-11-24 18:01:59] total 1298456
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-24 18:01:59] -rwx------. 1 boincer umatlas     36292 Nov 23 05:18 runpilot2-wrapper.sh
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:18 queuedata.json
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas       100 Nov 24 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:01:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 05:30 run_atlas
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas       105 Nov 24 05:30 job.xml
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas 409043284 Nov 24 05:30 EVNT.47483658._001152.pool.root.1
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 05:30 start_atlas.sh
[2025-11-24 18:01:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 05:30 shared
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 05:30 input.tar.gz
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas         0 Nov 24 05:30 boinc_lockfile
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas      2782 Nov 24 05:30 pandaJob.out
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas        57 Nov 24 05:30 setup.sh.local
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas    989824 Nov 24 05:31 agis_schedconf.cvmfs.json
[2025-11-24 18:01:59] drwx------. 5 boincer umatlas      4096 Nov 24 05:31 pilot3
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas       533 Nov 24 17:49 boinc_task_state.xml
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 17:58 init_data.xml
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas 900617851 Nov 24 18:00 HITS.47556149._001381.pool.root.1
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas      1060 Nov 24 18:00 memory_monitor_summary.json
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:00 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas   1970156 Nov 24 18:00 log.47556149._001381.job.log.tgz.1
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas      8626 Nov 24 18:01 heartbeat.json
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas        95 Nov 24 18:01 pilot_heartbeat.json
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 18:01 boinc_mmap_file
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas        29 Nov 24 18:01 wrapper_checkpoint.txt
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas      5010 Nov 24 18:01 pilotlog.txt
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas   6046895 Nov 24 18:01 log.47556149._001381.job.log.1
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas       353 Nov 24 18:01 output.list
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:01 runtime_log
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas   8038400 Nov 24 18:01 result.tar.gz
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas      9348 Nov 24 18:01 runtime_log.err
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas       662 Nov 24 18:01 MR4MDm6LMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGnKKDmlTPwMm.diag
[2025-11-24 18:01:59] -rw-r--r--. 1 boincer umatlas     21325 Nov 24 18:01 stderr.txt
[2025-11-24 18:01:59] HITS file was successfully produced:
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas 900617851 Nov 24 18:00 shared/HITS.pool.root.1
[2025-11-24 18:01:59]  *** Contents of shared directory: ***
[2025-11-24 18:01:59] total 1287428
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas 409043284 Nov 24 05:30 ATLAS.root_0
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 05:30 start_atlas.sh
[2025-11-24 18:01:59] -rw-r--r--. 2 boincer umatlas    590097 Nov 24 05:30 input.tar.gz
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas 900617851 Nov 24 18:00 HITS.pool.root.1
[2025-11-24 18:01:59] -rw-------. 1 boincer umatlas   8038400 Nov 24 18:01 result.tar.gz
18:02:01 (1136937): run_atlas exited; CPU time 235324.865406
18:02:01 (1136937): called boinc_finish(0)

</stderr_txt>
]]>

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