Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:32 (1411784): wrapper (7.7.26015): starting
21:43:32 (1411784): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 21:43:32] Arguments: --nthreads 12
[2025-11-23 21:43:32] Threads: 12
[2025-11-23 21:43:32] Checking for CVMFS
[2025-11-23 21:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:43:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:43:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:43:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:43:34] 2.11.5.0 4091557 24814 188124 153235 2 122 28273527 45568000 18874 130560 0 191742055 99.754 136830419 22944 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-23 21:43:34] CVMFS is ok
[2025-11-23 21:43:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:43:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:43:34] Further information can be found at the LHC@home message board.
[2025-11-23 21:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:43:34] Checking for apptainer binary...
[2025-11-23 21:43:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:43:34] Running /usr/bin/apptainer --version
[2025-11-23 21:43:35] apptainer version 1.4.1-1.el9
[2025-11-23 21:43:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:43:36] wns0073.triumf.lcg
[2025-11-23 21:43:36] apptainer works
[2025-11-23 21:43:36] Set ATHENA_PROC_NUMBER=12
[2025-11-23 21:43:36] Set ATHENA_CORE_NUMBER=12
[2025-11-23 21:43:37] Starting ATLAS job with PandaID=6895367384
[2025-11-23 21:43:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 21:53:44]  *** The last 200 lines of the pilot log: ***
[2025-11-23 21:53:44] 2025-11-24 05:53:06,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 21:53:44] 2025-11-24 05:53:06,018 | WARNING  | wrong length of table data, x=[1763963248.0, 1763963310.0, 1763963370.0, 1763963431.0], y=[1085.0, 623018.0, 416156.0, 0.0] (must be same and length>=4)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | could have reported an average CPU frequency of 1314 MHz (4 samples)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . Timing measurements:
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . get job = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . initial setup = 5 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload setup = 43 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-in = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload execution = 229 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-out = 2 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . log creation = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895367384/pilotlog.txt
[2025-11-23 21:53:44] 2025-11-24 05:53:06,156 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-23 21:53:44] - Log from pilotlog.txt -
[2025-11-23 21:53:44] 2025-11-24 05:53:06,014 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895367384/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,015 | INFO     | extracted standard info from prmon json
[2025-11-23 21:53:44] 2025-11-24 05:53:06,015 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:53:44] 2025-11-24 05:53:06,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:53:44] 2025-11-24 05:53:06,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 21:53:44] 2025-11-24 05:53:06,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 21:53:44] 2025-11-24 05:53:06,018 | WARNING  | wrong length of table data, x=[1763963248.0, 1763963310.0, 1763963370.0, 1763963431.0], y=[1085.0, 623018.0, 416156.0, 0.0] (must be same and length>=4)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | could have reported an average CPU frequency of 1314 MHz (4 samples)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . Timing measurements:
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . get job = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . initial setup = 5 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload setup = 43 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-in = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload execution = 229 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-out = 2 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . log creation = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895367384/pilotlog.txt
[2025-11-23 21:53:44] 2025-11-24 05:53:06,156 | WARNING  | 
[2025-11-23 21:53:44] [begin log extracts]
[2025-11-23 21:53:44] - Log from pilotlog.txt -
[2025-11-23 21:53:44] 2025-11-24 05:53:06,014 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895367384/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,015 | INFO     | extracted standard info from prmon json
[2025-11-23 21:53:44] 2025-11-24 05:53:06,015 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 21:53:44] 2025-11-24 05:53:06,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 21:53:44] 2025-11-24 05:53:06,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-23 21:53:44] 2025-11-24 05:53:06,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-23 21:53:44] 2025-11-24 05:53:06,018 | WARNING  | wrong length of table data, x=[1763963248.0, 1763963310.0, 1763963370.0, 1763963431.0], y=[1085.0, 623018.0, 416156.0, 0.0] (must be same and length>=4)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | could have reported an average CPU frequency of 1314 MHz (4 samples)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,019 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . Timing measurements:
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . get job = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . initial setup = 5 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload setup = 43 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-in = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . payload execution = 229 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . stage-out = 2 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | . log creation = 0 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,020 | INFO     | ..............................
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-23 21:53:44] 2025-11-24 05:53:06,021 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895367384/pilotlog.txt
[2025-11-23 21:53:44] [end log extracts]
[2025-11-23 21:53:44] 2025-11-24 05:53:06,157 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-23 21:53:44] 2025-11-24 05:53:06,158 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-23 21:53:44] 2025-11-24 05:53:06,778 | INFO     | 
[2025-11-23 21:53:44] 2025-11-24 05:53:06,778 | INFO     | job summary report
[2025-11-23 21:53:44] 2025-11-24 05:53:06,778 | INFO     | --------------------------------------------------
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | PanDA job id: 6895367384
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | task id: 47556137
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-23 21:50:25,729 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | pilot state: failed 
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | transexitcode: 65
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | exeerrorcode: 65
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-23 21:53:44] 2025-11-24 05:53:06,779 | INFO     | exitcode: 65
[2025-11-23 21:53:44] 2025-11-24 05:53:06,780 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-23 21:53:44] 2025-11-24 05:53:06,780 | INFO     | cpuconsumptiontime: 83 s
[2025-11-23 21:53:44] 2025-11-24 05:53:06,780 | INFO     | nevents: 0
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | neventsw: 0
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | pid: 1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | pgrp: 1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | corecount: 12
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | event service: False
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | sizes: {0: 2298526, 1: 2298582, 2: 2298610, 3: 2298837, 4: 2298837, 16: 2298865, 27: 2299021, 38: 2299049, 40: 2299339, 49: 2299367, 274: 2324872, 275: 2325156, 27
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | --------------------------------------------------
[2025-11-23 21:53:44] 2025-11-24 05:53:06,781 | INFO     | 
[2025-11-23 21:53:44] 2025-11-24 05:53:06,782 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-23 21:53:44] 2025-11-24 05:53:07,030 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | job 6895367384 has completed (purged errors)
[2025-11-23 21:53:44] 2025-11-24 05:53:07,033 | INFO     | overall cleanup function is called
[2025-11-23 21:53:44] 2025-11-24 05:53:08,055 | INFO     | --- collectZombieJob: --- 10, [1422564]
[2025-11-23 21:53:44] 2025-11-24 05:53:08,055 | INFO     | zombie collector waiting for pid 1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:08,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 21:53:44] 2025-11-24 05:53:08,056 | INFO     | collected zombie processes
[2025-11-23 21:53:44] 2025-11-24 05:53:08,056 | INFO     | will attempt to kill all subprocesses of pid=1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:08,815 | INFO     | process IDs to be killed: [1422564] (in reverse order)
[2025-11-23 21:53:44] 2025-11-24 05:53:08,936 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 21:53:44] 2025-11-24 05:53:08,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 21:53:44] 2025-11-24 05:53:08,949 | INFO     | did not find any defunct processes belonging to 1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:09,008 | INFO     | did not find any defunct processes belonging to 1422564
[2025-11-23 21:53:44] 2025-11-24 05:53:09,010 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 21:53:44] 2025-11-24 05:53:09,010 | INFO     | ready for new job
[2025-11-23 21:53:44] 2025-11-24 05:53:09,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 21:53:44] 2025-11-24 05:53:09,034 | INFO     | ***************************************
[2025-11-23 21:53:44] 2025-11-24 05:53:09,035 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 21:53:44] 2025-11-24 05:53:09,035 | INFO     | ***************************************
[2025-11-23 21:53:44] 2025-11-24 05:53:09,035 | INFO     | 
[2025-11-23 21:53:44] 2025-11-24 05:53:09,060 | INFO     | architecture information:
[2025-11-23 21:53:44] 2025-11-24 05:53:09,071 | INFO     | executing command: cat /etc/os-release
[2025-11-23 21:53:44] 2025-11-24 05:53:09,175 | INFO     | cat /etc/os-release:
[2025-11-23 21:53:44] NAME="CentOS Linux"
[2025-11-23 21:53:44] VERSION="7 (Core)"
[2025-11-23 21:53:44] ID="centos"
[2025-11-23 21:53:44] ID_LIKE="rhel fedora"
[2025-11-23 21:53:44] VERSION_ID="7"
[2025-11-23 21:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 21:53:44] ANSI_COLOR="0;31"
[2025-11-23 21:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 21:53:44] HOME_URL="https://www.centos.org/"
[2025-11-23 21:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 21:53:44] 
[2025-11-23 21:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 21:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 21:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 21:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 21:53:44] 
[2025-11-23 21:53:44] 2025-11-24 05:53:09,176 | INFO     | ***************************************
[2025-11-23 21:53:44] 2025-11-24 05:53:09,679 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-23 21:53:44] 2025-11-24 05:53:09,737 | INFO     | sufficient remaining disk space (693631975424 B)
[2025-11-23 21:53:44] 2025-11-24 05:53:09,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 21:53:44] 2025-11-24 05:53:09,737 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 21:53:44] 2025-11-24 05:53:09,738 | INFO     | update_server=False
[2025-11-23 21:53:44] 2025-11-24 05:53:09,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 21:53:44] 2025-11-24 05:53:09,739 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 21:53:44] 2025-11-24 05:53:09,769 | INFO     | all data control threads have been joined
[2025-11-23 21:53:44] 2025-11-24 05:53:10,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:53:44] 2025-11-24 05:53:10,142 | INFO     | aborting loop
[2025-11-23 21:53:44] 2025-11-24 05:53:10,550 | INFO     | all job control threads have been joined
[2025-11-23 21:53:44] 2025-11-24 05:53:10,744 | INFO     | [job] retrieve thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:10,775 | INFO     | [data] control thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:10,832 | INFO     | [payload] failed_post thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:10,914 | INFO     | [payload] validate_post thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,126 | INFO     | all payload control threads have been joined
[2025-11-23 21:53:44] 2025-11-24 05:53:11,139 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,148 | INFO     | [job] job monitor thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,400 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,564 | INFO     | [job] control thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,678 | INFO     | [job] validate thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,746 | INFO     | [data] copytool_out thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 21:53:44] 2025-11-24 05:53:11,856 | INFO     | [data] copytool_in thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:11,938 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:12,132 | INFO     | [payload] control thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:12,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 21:53:44] 2025-11-24 05:53:12,787 | INFO     | [job] queue monitor thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:16,790 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 21:53:44] 2025-11-24 05:53:36,555 | INFO     | [monitor] cgroup control has ended
[2025-11-23 21:53:44] 2025-11-24 05:53:37,485 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052565133120)>', '<ExcThread(monitor, started 140052030023424)>']
[2025-11-23 21:53:44] 2025-11-24 05:53:39,785 | INFO     | PID=1415619 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | INFO     | .. there are 28 such processes running
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 21:53:44] 2025-11-24 05:53:39,786 | INFO     | [monitor] control thread has ended
[2025-11-23 21:53:44] 2025-11-24 05:53:42,512 | INFO     | all workflow threads have been joined
[2025-11-23 21:53:44] 2025-11-24 05:53:42,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 21:53:44] 2025-11-24 05:53:42,513 | INFO     | traces error code: 0
[2025-11-23 21:53:44] 2025-11-24 05:53:42,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 21:53:44] 2025-11-24 05:53:43,460 [wrapper] ==== pilot stdout END ====
[2025-11-23 21:53:44] 2025-11-24 05:53:43,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 21:53:44] 2025-11-24 05:53:43,536 [wrapper] pilotpid: 1415619
[2025-11-23 21:53:44] 2025-11-24 05:53:43,563 [wrapper] Pilot exit status: 0
[2025-11-23 21:53:44] 2025-11-24 05:53:43,672 [wrapper] pandaids: 6895367384
[2025-11-23 21:53:44] 2025-11-24 05:53:43,758 [wrapper] cleanup supervisor_pilot 1415625 1415620
[2025-11-23 21:53:44] 2025-11-24 05:53:43,763 [wrapper] Test setup, not cleaning
[2025-11-23 21:53:44] 2025-11-24 05:53:43,767 [wrapper] apfmon messages muted
[2025-11-23 21:53:44] 2025-11-24 05:53:43,771 [wrapper] ==== wrapper stdout END ====
[2025-11-23 21:53:44] 2025-11-24 05:53:43,774 [wrapper] ==== wrapper stderr END ====
[2025-11-23 21:53:44]  *** Error codes and diagnostics ***
[2025-11-23 21:53:44]     "exeErrorCode": 65,
[2025-11-23 21:53:44]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-23 21:53:44]     "pilotErrorCode": 1305,
[2025-11-23 21:53:44]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-23 21:53:44]  *** Listing of results directory ***
[2025-11-23 21:53:44] total 404360
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc    576529 Nov 23 11:15 pilot3.tar.gz
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc      5112 Nov 23 11:16 queuedata.json
[2025-11-23 21:53:44] -rwx------. 1 boinc boinc     36292 Nov 23 11:17 runpilot2-wrapper.sh
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc       100 Nov 23 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 21:53:44] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 21:43 run_atlas
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc       105 Nov 23 21:43 job.xml
[2025-11-23 21:53:44] -rw-r--r--. 2 boinc boinc 409797002 Nov 23 21:43 EVNT.47483658._000862.pool.root.1
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc      6593 Nov 23 21:43 init_data.xml
[2025-11-23 21:53:44] -rw-r--r--. 2 boinc boinc    590100 Nov 23 21:43 input.tar.gz
[2025-11-23 21:53:44] -rw-r--r--. 2 boinc boinc     15847 Nov 23 21:43 start_atlas.sh
[2025-11-23 21:53:44] drwxrwx--x. 2 boinc boinc      4096 Nov 23 21:43 shared
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc         0 Nov 23 21:43 boinc_lockfile
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc      2785 Nov 23 21:43 pandaJob.out
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc    989786 Nov 23 21:44 agis_schedconf.cvmfs.json
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc   1526164 Nov 23 21:44 agis_ddmendpoints.agis.ALL.json
[2025-11-23 21:53:44] drwx------. 5 boinc boinc      4096 Nov 23 21:44 pilot3
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc       525 Nov 23 21:50 boinc_task_state.xml
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc      1003 Nov 23 21:50 memory_monitor_summary.json
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc     51459 Nov 23 21:50 log.47556137._008489.job.log.tgz.1
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc        95 Nov 23 21:52 pilot_heartbeat.json
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc     10340 Nov 23 21:53 heartbeat.json
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc      8192 Nov 23 21:53 boinc_mmap_file
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc        23 Nov 23 21:53 wrapper_checkpoint.txt
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc      4822 Nov 23 21:53 pilotlog.txt
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc    122482 Nov 23 21:53 log.47556137._008489.job.log.1
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc       186 Nov 23 21:53 output.list
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc       620 Nov 23 21:53 runtime_log
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc    194560 Nov 23 21:53 result.tar.gz
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc      8636 Nov 23 21:53 runtime_log.err
[2025-11-23 21:53:44] -rw-------. 1 boinc boinc       645 Nov 23 21:53 HkvMDmZlUh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma8KKDmQjsbCn.diag
[2025-11-23 21:53:44] -rw-r--r--. 1 boinc boinc     22666 Nov 23 21:53 stderr.txt
[2025-11-23 21:53:45] No HITS result produced
[2025-11-23 21:53:45]  *** Contents of shared directory: ***
[2025-11-23 21:53:45] total 400988
[2025-11-23 21:53:45] -rw-r--r--. 2 boinc boinc 409797002 Nov 23 21:43 ATLAS.root_0
[2025-11-23 21:53:45] -rw-r--r--. 2 boinc boinc    590100 Nov 23 21:43 input.tar.gz
[2025-11-23 21:53:45] -rw-r--r--. 2 boinc boinc     15847 Nov 23 21:43 start_atlas.sh
[2025-11-23 21:53:45] -rw-------. 1 boinc boinc    194560 Nov 23 21:53 result.tar.gz
21:53:46 (1411784): run_atlas exited; CPU time 92.769657
21:53:46 (1411784): called boinc_finish(0)

</stderr_txt>
]]>

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