Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:43 (3550197): wrapper (7.7.26015): starting
00:03:43 (3550197): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 00:03:44] Arguments: --nthreads 9
[2025-11-26 00:03:44] Threads: 9
[2025-11-26 00:03:44] Checking for CVMFS
[2025-11-26 00:03:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:03:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:03:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:03:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:03:44] 2.13.2.0 6122 34674 374792 153309 1 102 35509501 40960000 15521 16776704 0 70363983 99.605 75914474 40299 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 00:03:44] CVMFS is ok
[2025-11-26 00:03:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 00:03:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 00:03:44] Further information can be found at the LHC@home message board.
[2025-11-26 00:03:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:03:44] Checking for apptainer binary...
[2025-11-26 00:03:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:03:44] Running /usr/bin/apptainer --version
[2025-11-26 00:03:44] apptainer version 1.4.4-1.el9
[2025-11-26 00:03:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:03:44] c-210-35-2.aglt2.org
[2025-11-26 00:03:44] apptainer works
[2025-11-26 00:03:45] Set ATHENA_PROC_NUMBER=9
[2025-11-26 00:03:45] Set ATHENA_CORE_NUMBER=9
[2025-11-26 00:03:45] Starting ATLAS job with PandaID=6895356026
[2025-11-26 00:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:08:43]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:08:43] 2025-11-27 01:07:38,326 | INFO     | mean x: 1764169578.8291032
[2025-11-26 20:08:43] 2025-11-27 01:07:38,327 | INFO     | mean y: 3052290.3223350253
[2025-11-26 20:08:43] 2025-11-27 01:07:38,327 | INFO     | intersect: -13289786445.441746
[2025-11-26 20:08:43] 2025-11-27 01:07:38,328 | INFO     | chi2: 10.948967423059278
[2025-11-26 20:08:43] 2025-11-27 01:07:38,329 | INFO     | sum of square deviations: 505518418639.32886
[2025-11-26 20:08:43] 2025-11-27 01:07:38,373 | INFO     | time since job start (72192s) is within the limit (172800.0s)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,378 | INFO     | sum of deviations: 4289925619418.2046
[2025-11-26 20:08:43] 2025-11-27 01:07:38,379 | INFO     | mean x: 1764169426.3432455
[2025-11-26 20:08:43] 2025-11-27 01:07:38,379 | INFO     | mean y: 3062475.2395921834
[2025-11-26 20:08:43] 2025-11-27 01:07:38,379 | INFO     | intersect: -14968015412.357304
[2025-11-26 20:08:43] 2025-11-27 01:07:38,380 | INFO     | chi2: 7.59861521091012
[2025-11-26 20:08:43] 2025-11-27 01:07:38,380 | INFO     | current chi2=7.59861521091012 (change=30.59970938531688 %)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,387 | INFO     | sum of square deviations: 499103371095.918
[2025-11-26 20:08:43] 2025-11-27 01:07:38,438 | INFO     | sum of deviations: 4603762825924.516
[2025-11-26 20:08:43] 2025-11-27 01:07:38,443 | INFO     | mean x: 1764169273.8566554
[2025-11-26 20:08:43] 2025-11-27 01:07:38,443 | INFO     | mean y: 3069927.6459044367
[2025-11-26 20:08:43] 2025-11-27 01:07:38,443 | INFO     | intersect: -16269745268.504433
[2025-11-26 20:08:43] 2025-11-27 01:07:38,444 | INFO     | chi2: 5.452868988630132
[2025-11-26 20:08:43] 2025-11-27 01:07:38,445 | INFO     | current chi2=5.452868988630132 (change=28.23864826316139 %)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,446 | INFO     | sum of square deviations: 492742764471.8217
[2025-11-26 20:08:43] 2025-11-27 01:07:38,516 | INFO     | sum of deviations: 4669610157219.328
[2025-11-26 20:08:43] 2025-11-27 01:07:38,516 | INFO     | mean x: 1764169121.369323
[2025-11-26 20:08:43] 2025-11-27 01:07:38,516 | INFO     | mean y: 3071504.8414738644
[2025-11-26 20:08:43] 2025-11-27 01:07:38,517 | INFO     | intersect: -16715554606.349226
[2025-11-26 20:08:43] 2025-11-27 01:07:38,518 | INFO     | chi2: 5.24048380461449
[2025-11-26 20:08:43] 2025-11-27 01:07:38,523 | INFO     | current chi2=5.24048380461449 (change=3.8949254870874395 %)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,523 | INFO     | right removable region: 1166
[2025-11-26 20:08:43] 2025-11-27 01:07:38,524 | INFO     | sum of square deviations: 505516018289.3289
[2025-11-26 20:08:43] 2025-11-27 01:07:38,665 | INFO     | sum of deviations: 3386648720725.45
[2025-11-26 20:08:43] 2025-11-27 01:07:38,665 | INFO     | mean x: 1764169731.3432455
[2025-11-26 20:08:43] 2025-11-27 01:07:38,665 | INFO     | mean y: 3063390.2761257435
[2025-11-26 20:08:43] 2025-11-27 01:07:38,666 | INFO     | intersect: -11815796838.949343
[2025-11-26 20:08:43] 2025-11-27 01:07:38,667 | INFO     | chi2: 7.357345700827906
[2025-11-26 20:08:43] 2025-11-27 01:07:38,667 | INFO     | current chi2=7.357345700827906 (change=32.80329170280633 %)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,696 | INFO     | sum of square deviations: 499098713501.9179
[2025-11-26 20:08:43] 2025-11-27 01:07:38,858 | INFO     | sum of deviations: 3099584257094.048
[2025-11-26 20:08:43] 2025-11-27 01:07:38,858 | INFO     | mean x: 1764169883.8566554
[2025-11-26 20:08:43] 2025-11-27 01:07:38,858 | INFO     | mean y: 3070208.0836177473
[2025-11-26 20:08:43] 2025-11-27 01:07:38,858 | INFO     | intersect: -10953065423.831833
[2025-11-26 20:08:43] 2025-11-27 01:07:38,860 | INFO     | chi2: 6.078577340307898
[2025-11-26 20:08:43] 2025-11-27 01:07:38,860 | INFO     | current chi2=6.078577340307898 (change=17.380838314775815 %)
[2025-11-26 20:08:43] 2025-11-27 01:07:38,860 | INFO     | left removable region: 20
[2025-11-26 20:08:43] 2025-11-27 01:07:38,875 | INFO     | sum of square deviations: 466611085379.3794
[2025-11-26 20:08:43] 2025-11-27 01:07:38,913 | INFO     | monitor loop #4568: job 0:6895356026 is in state 'finished'
[2025-11-26 20:08:43] 2025-11-27 01:07:38,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,012 | INFO     | sum of deviations: 3683371798020.9375
[2025-11-26 20:08:43] 2025-11-27 01:07:39,013 | INFO     | mean x: 1764169700.908377
[2025-11-26 20:08:43] 2025-11-27 01:07:39,013 | INFO     | mean y: 3095135.2565445025
[2025-11-26 20:08:43] 2025-11-27 01:07:39,013 | INFO     | intersect: -13923048342.37999
[2025-11-26 20:08:43] 2025-11-27 01:07:39,019 | INFO     | chi2: 0.14834324880553687
[2025-11-26 20:08:43] 2025-11-27 01:07:39,019 | INFO     | current memory leak: 7.89 B/s (using 1146 data points, chi2=0.15)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | could have reported an average CPU frequency of 2945 MHz (43 samples)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | ..............................
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . Timing measurements:
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . get job = 0 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . initial setup = 4 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . payload setup = 23 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . stage-in = 0 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,021 | INFO     | . payload execution = 72094 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,022 | INFO     | . stage-out = 6 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,022 | INFO     | . log creation = 1 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,022 | INFO     | ..............................
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | 
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | job summary report
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | --------------------------------------------------
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | PanDA job id: 6895356026
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | task id: 47556137
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | errors: (none)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | pilot state: finished 
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | transexitcode: 0
[2025-11-26 20:08:43] 2025-11-27 01:07:39,417 | INFO     | exeerrorcode: 0
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | exeerrordiag: 
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | exitcode: 0
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | exitmsg: OK
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | cpuconsumptiontime: 243246 s
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | nevents: 1000
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | neventsw: 0
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | pid: 3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | pgrp: 3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | corecount: 9
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | event service: False
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | sizes: {0: 2284037, 1: 2284093, 2: 2284121, 3: 2284348, 14: 2284348, 19: 2284638, 25: 2284794, 72121: 2344185, 72128: 2353179, 72131: 2353235, 72146: 2353481}
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | --------------------------------------------------
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | 
[2025-11-26 20:08:43] 2025-11-27 01:07:39,418 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:08:43] 2025-11-27 01:07:39,501 | INFO     | job 6895356026 has completed (purged errors)
[2025-11-26 20:08:43] 2025-11-27 01:07:39,501 | INFO     | overall cleanup function is called
[2025-11-26 20:08:43] 2025-11-27 01:07:40,143 | INFO     | PID=3555377 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:08:43] 2025-11-27 01:07:40,143 | INFO     | .. there are 18 such processes running
[2025-11-26 20:08:43] 2025-11-27 01:07:40,562 | INFO     | --- collectZombieJob: --- 10, [3571484]
[2025-11-26 20:08:43] 2025-11-27 01:07:40,562 | INFO     | zombie collector waiting for pid 3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:40,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:08:43] 2025-11-27 01:07:40,562 | INFO     | collected zombie processes
[2025-11-26 20:08:43] 2025-11-27 01:07:40,562 | INFO     | will attempt to kill all subprocesses of pid=3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:40,980 | INFO     | process IDs to be killed: [3571484] (in reverse order)
[2025-11-26 20:08:43] 2025-11-27 01:07:41,129 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:08:43] 2025-11-27 01:07:41,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:08:43] 2025-11-27 01:07:41,154 | INFO     | did not find any defunct processes belonging to 3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:41,178 | INFO     | did not find any defunct processes belonging to 3571484
[2025-11-26 20:08:43] 2025-11-27 01:07:41,187 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:08:43] 2025-11-27 01:07:41,187 | INFO     | ready for new job
[2025-11-26 20:08:43] 2025-11-27 01:07:41,187 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:08:43] 2025-11-27 01:07:41,197 | INFO     | ***************************************
[2025-11-26 20:08:43] 2025-11-27 01:07:41,197 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:08:43] 2025-11-27 01:07:41,197 | INFO     | ***************************************
[2025-11-26 20:08:43] 2025-11-27 01:07:41,198 | INFO     | 
[2025-11-26 20:08:43] 2025-11-27 01:07:41,205 | INFO     | architecture information:
[2025-11-26 20:08:43] 2025-11-27 01:07:41,205 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:08:43] 2025-11-27 01:07:41,266 | INFO     | cat /etc/os-release:
[2025-11-26 20:08:43] NAME="CentOS Linux"
[2025-11-26 20:08:43] VERSION="7 (Core)"
[2025-11-26 20:08:43] ID="centos"
[2025-11-26 20:08:43] ID_LIKE="rhel fedora"
[2025-11-26 20:08:43] VERSION_ID="7"
[2025-11-26 20:08:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:08:43] ANSI_COLOR="0;31"
[2025-11-26 20:08:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:08:43] HOME_URL="https://www.centos.org/"
[2025-11-26 20:08:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:08:43] 
[2025-11-26 20:08:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:08:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:08:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:08:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:08:43] 
[2025-11-26 20:08:43] 2025-11-27 01:07:41,266 | INFO     | ***************************************
[2025-11-26 20:08:43] 2025-11-27 01:07:41,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 20:08:43] 2025-11-27 01:07:41,805 | INFO     | sufficient remaining disk space (69503811584 B)
[2025-11-26 20:08:43] 2025-11-27 01:07:41,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:08:43] 2025-11-27 01:07:41,806 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:08:43] 2025-11-27 01:07:41,806 | INFO     | update_server=False
[2025-11-26 20:08:43] 2025-11-27 01:07:41,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:08:43] 2025-11-27 01:07:42,052 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:08:43] 2025-11-27 01:07:42,147 | INFO     | all job control threads have been joined
[2025-11-26 20:08:43] 2025-11-27 01:07:42,225 | INFO     | all data control threads have been joined
[2025-11-26 20:08:43] 2025-11-27 01:07:42,434 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:08:43] 2025-11-27 01:07:42,434 | INFO     | aborting loop
[2025-11-26 20:08:43] 2025-11-27 01:07:42,815 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:42,936 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,038 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,156 | INFO     | [job] control thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,161 | INFO     | all payload control threads have been joined
[2025-11-26 20:08:43] 2025-11-27 01:07:43,234 | INFO     | [data] control thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,441 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:08:43] 2025-11-27 01:07:43,715 | INFO     | [job] validate thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,760 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,937 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:43,997 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:44,061 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:44,167 | INFO     | [payload] control thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:44,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:08:43] 2025-11-27 01:07:44,350 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:45,311 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:07:47,620 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:08:43] 2025-11-27 01:08:12,555 | INFO     | PID=3555377 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 20:08:43] 2025-11-27 01:08:12,555 | INFO     | .. there are 18 such processes running
[2025-11-26 20:08:43] 2025-11-27 01:08:12,556 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:08:43] 2025-11-27 01:08:12,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:08:43] 2025-11-27 01:08:12,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:08:43] 2025-11-27 01:08:34,469 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:08:43] 2025-11-27 01:08:36,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140117511706432)>', '<ExcThread(monitor, started 140117150766848)>']
[2025-11-26 20:08:43] 2025-11-27 01:08:36,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:08:43] 2025-11-27 01:08:36,702 | INFO     | [monitor] control thread has ended
[2025-11-26 20:08:43] 2025-11-27 01:08:41,491 | INFO     | all workflow threads have been joined
[2025-11-26 20:08:43] 2025-11-27 01:08:41,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:08:43] 2025-11-27 01:08:41,491 | INFO     | traces error code: 0
[2025-11-26 20:08:43] 2025-11-27 01:08:41,491 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:08:43] 2025-11-27 01:08:41,876 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:08:43] 2025-11-27 01:08:41,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:08:43] 2025-11-27 01:08:41,951 [wrapper] pilotpid: 3555377
[2025-11-26 20:08:43] 2025-11-27 01:08:42,002 [wrapper] Pilot exit status: 0
[2025-11-26 20:08:43] 2025-11-27 01:08:42,107 [wrapper] pandaids: 6895356026
[2025-11-26 20:08:43] 2025-11-27 01:08:42,739 [wrapper] cleanup supervisor_pilot 2596235 3555378
[2025-11-26 20:08:43] 2025-11-27 01:08:42,747 [wrapper] Test setup, not cleaning
[2025-11-26 20:08:43] 2025-11-27 01:08:42,758 [wrapper] apfmon messages muted
[2025-11-26 20:08:43] 2025-11-27 01:08:42,764 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:08:43] 2025-11-27 01:08:42,797 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:08:43]  *** Error codes and diagnostics ***
[2025-11-26 20:08:43]     "exeErrorCode": 0,
[2025-11-26 20:08:43]     "exeErrorDiag": "",
[2025-11-26 20:08:43]     "pilotErrorCode": 0,
[2025-11-26 20:08:43]     "pilotErrorDiag": "",
[2025-11-26 20:08:43]  *** Listing of results directory ***
[2025-11-26 20:08:43] total 1331328
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 04:19 pilot3.tar.gz
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:02 queuedata.json
[2025-11-26 20:08:43] -rwx------. 1 boincer umatlas     36292 Nov 23 05:06 runpilot2-wrapper.sh
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas       100 Nov 26 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:08:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 00:03 run_atlas
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas       105 Nov 26 00:03 job.xml
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas 412083669 Nov 26 00:03 EVNT.47483658._000685.pool.root.1
[2025-11-26 20:08:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 00:03 shared
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:03 input.tar.gz
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas         0 Nov 26 00:03 boinc_lockfile
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 00:03 pandaJob.out
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas        57 Nov 26 00:03 setup.sh.local
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas    991877 Nov 26 00:04 agis_schedconf.cvmfs.json
[2025-11-26 20:08:43] drwx------. 5 boincer umatlas      4096 Nov 26 00:04 pilot3
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas       533 Nov 26 19:51 boinc_task_state.xml
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas      6842 Nov 26 20:00 init_data.xml
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas 923471940 Nov 26 20:06 HITS.47556137._006809.pool.root.1
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas      1064 Nov 26 20:07 memory_monitor_summary.json
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas   1516240 Nov 26 20:07 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas   2421890 Nov 26 20:07 log.47556137._006809.job.log.tgz.1
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas      8628 Nov 26 20:07 heartbeat.json
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas        95 Nov 26 20:08 pilot_heartbeat.json
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 20:08 boinc_mmap_file
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas      4824 Nov 26 20:08 pilotlog.txt
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas        29 Nov 26 20:08 wrapper_checkpoint.txt
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas   9476118 Nov 26 20:08 log.47556137._006809.job.log.1
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas       353 Nov 26 20:08 output.list
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas       620 Nov 26 20:08 runtime_log
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas  11919360 Nov 26 20:08 result.tar.gz
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas      9353 Nov 26 20:08 runtime_log.err
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas       663 Nov 26 20:08 9CcKDm89Lh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvmKKDmtrNRTn.diag
[2025-11-26 20:08:43] -rw-r--r--. 1 boincer umatlas     21377 Nov 26 20:08 stderr.txt
[2025-11-26 20:08:43] HITS file was successfully produced:
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas 923471940 Nov 26 20:06 shared/HITS.pool.root.1
[2025-11-26 20:08:43]  *** Contents of shared directory: ***
[2025-11-26 20:08:43] total 1316504
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas 412083669 Nov 26 00:03 ATLAS.root_0
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 00:03 input.tar.gz
[2025-11-26 20:08:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 00:03 start_atlas.sh
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas 923471940 Nov 26 20:06 HITS.pool.root.1
[2025-11-26 20:08:43] -rw-------. 1 boincer umatlas  11919360 Nov 26 20:08 result.tar.gz
20:08:44 (3550197): run_atlas exited; CPU time 244305.712425
20:08:44 (3550197): called boinc_finish(0)

</stderr_txt>
]]>

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