Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:51 (3238266): wrapper (7.7.26015): starting
09:55:51 (3238266): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 09:55:51] Arguments: --nthreads 9
[2025-11-24 09:55:51] Threads: 9
[2025-11-24 09:55:51] Checking for CVMFS
[2025-11-24 09:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:55:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:55:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:55:53] 2.13.3.0 13693 27315 362932 153248 2 695 22481748 40960000 24216 16776704 0 75641106 99.610 79916736 37361 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 09:55:53] CVMFS is ok
[2025-11-24 09:55:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:55:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:55:53] Further information can be found at the LHC@home message board.
[2025-11-24 09:55:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:55:53] Checking for apptainer binary...
[2025-11-24 09:55:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:55:53] Running /usr/bin/apptainer --version
[2025-11-24 09:55:53] apptainer version 1.4.4-1.el9
[2025-11-24 09:55:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:55:54] c6-5-37-3.aglt2.org
[2025-11-24 09:55:54] apptainer works
[2025-11-24 09:55:54] Set ATHENA_PROC_NUMBER=9
[2025-11-24 09:55:54] Set ATHENA_CORE_NUMBER=9
[2025-11-24 09:55:54] Starting ATLAS job with PandaID=6894052256
[2025-11-24 09:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:04:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:04:20] 2025-11-24 21:03:38,083 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3113.990714285715
[2025-11-24 16:04:20] 2025-11-24 21:03:38,095 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894052256/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,096 | INFO     | extracted standard info from prmon json
[2025-11-24 16:04:20] 2025-11-24 21:03:38,096 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 16:04:20] 2025-11-24 21:03:38,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:04:20] 2025-11-24 21:03:38,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 16:04:20] 2025-11-24 21:03:38,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 16:04:20] 2025-11-24 21:03:38,102 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:04:20] 2025-11-24 21:03:38,102 | INFO     | sum of square deviations: 14467439800.622173
[2025-11-24 16:04:20] 2025-11-24 21:03:38,105 | INFO     | sum of deviations: 90734203143.71107
[2025-11-24 16:04:20] 2025-11-24 21:03:38,105 | INFO     | mean x: 1764007223.8777778
[2025-11-24 16:04:20] 2025-11-24 21:03:38,105 | INFO     | mean y: 2622456.038888889
[2025-11-24 16:04:20] 2025-11-24 21:03:38,105 | INFO     | intersect: -11060550572.77972
[2025-11-24 16:04:20] 2025-11-24 21:03:38,106 | INFO     | chi2: 2.8546410189239015
[2025-11-24 16:04:20] 2025-11-24 21:03:38,106 | INFO     | sum of square deviations: 13873014319.898663
[2025-11-24 16:04:20] 2025-11-24 21:03:38,108 | INFO     | sum of deviations: 114251087976.78877
[2025-11-24 16:04:20] 2025-11-24 21:03:38,109 | INFO     | mean x: 1764007071.3830986
[2025-11-24 16:04:20] 2025-11-24 21:03:38,109 | INFO     | mean y: 2628416.4647887326
[2025-11-24 16:04:20] 2025-11-24 21:03:38,109 | INFO     | intersect: -14524836376.47432
[2025-11-24 16:04:20] 2025-11-24 21:03:38,109 | INFO     | chi2: 2.0970483123803807
[2025-11-24 16:04:20] 2025-11-24 21:03:38,109 | INFO     | current chi2=2.0970483123803807 (change=26.538983414072376 %)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,110 | INFO     | sum of square deviations: 13295057344.197195
[2025-11-24 16:04:20] 2025-11-24 21:03:38,112 | INFO     | sum of deviations: 112250970165.76288
[2025-11-24 16:04:20] 2025-11-24 21:03:38,112 | INFO     | mean x: 1764006918.882857
[2025-11-24 16:04:20] 2025-11-24 21:03:38,112 | INFO     | mean y: 2627888.677142857
[2025-11-24 16:04:20] 2025-11-24 21:03:38,112 | INFO     | intersect: -14890988806.413204
[2025-11-24 16:04:20] 2025-11-24 21:03:38,113 | INFO     | chi2: 2.097262811480227
[2025-11-24 16:04:20] 2025-11-24 21:03:38,113 | INFO     | current chi2=2.097262811480227 (change=-0.010228619845339614 %)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,113 | INFO     | right removable region: 349
[2025-11-24 16:04:20] 2025-11-24 21:03:38,113 | INFO     | sum of square deviations: 13872931359.898663
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | sum of deviations: 11862614045.084522
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | mean x: 1764007376.3830986
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | mean y: 2642597.0140845072
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | intersect: -1505743636.280715
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | chi2: 0.8229283639589384
[2025-11-24 16:04:20] 2025-11-24 21:03:38,116 | INFO     | current chi2=0.8229283639589384 (change=71.17226444573569 %)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,117 | INFO     | sum of square deviations: 13294934856.654234
[2025-11-24 16:04:20] 2025-11-24 21:03:38,119 | INFO     | sum of deviations: -628819336.1628609
[2025-11-24 16:04:20] 2025-11-24 21:03:38,119 | INFO     | mean x: 1764007528.8885715
[2025-11-24 16:04:20] 2025-11-24 21:03:38,119 | INFO     | mean y: 2645903.5342857144
[2025-11-24 16:04:20] 2025-11-24 21:03:38,120 | INFO     | intersect: 86079335.53390281
[2025-11-24 16:04:20] 2025-11-24 21:03:38,120 | INFO     | chi2: 0.7764821218244874
[2025-11-24 16:04:20] 2025-11-24 21:03:38,120 | INFO     | current chi2=0.7764821218244874 (change=5.644020083474551 %)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,120 | INFO     | left removable region: 20
[2025-11-24 16:04:20] 2025-11-24 21:03:38,120 | INFO     | sum of square deviations: 11042594917.03955
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | sum of deviations: 21760197789.723427
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | mean x: 1764007498.4012158
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | mean y: 2652408.1914893617
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | intersect: -3473446493.9365354
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | chi2: 0.0031597478883506375
[2025-11-24 16:04:20] 2025-11-24 21:03:38,123 | INFO     | current memory leak: 1.97 B/s (using 329 data points, chi2=0.00)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | could have reported an average CPU frequency of 3168 MHz (15 samples)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | ..............................
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . Timing measurements:
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . get job = 0 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . initial setup = 5 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . payload setup = 25 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . stage-in = 0 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . payload execution = 21940 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,124 | INFO     | . stage-out = 2 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,125 | INFO     | . log creation = 0 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,125 | INFO     | ..............................
[2025-11-24 16:04:20] 2025-11-24 21:03:38,224 | INFO     | 
[2025-11-24 16:04:20] 2025-11-24 21:03:38,224 | INFO     | job summary report
[2025-11-24 16:04:20] 2025-11-24 21:03:38,224 | INFO     | --------------------------------------------------
[2025-11-24 16:04:20] 2025-11-24 21:03:38,224 | INFO     | PanDA job id: 6894052256
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | task id: 47523650
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | errors: (none)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | pilot state: finished 
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | transexitcode: 0
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | exeerrorcode: 0
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | exeerrordiag: 
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | exitcode: 0
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | exitmsg: OK
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | cpuconsumptiontime: 102730 s
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | nevents: 400
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | neventsw: 0
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | pid: 3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | pgrp: 3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:38,225 | INFO     | corecount: 9
[2025-11-24 16:04:20] 2025-11-24 21:03:38,226 | INFO     | event service: False
[2025-11-24 16:04:20] 2025-11-24 21:03:38,226 | INFO     | sizes: {0: 2283738, 1: 2283937, 12: 2283937, 16: 2284227, 22: 2284255, 21970: 2319011, 21971: 2319138, 21974: 2328192, 21978: 2328248, 21985: 2328442}
[2025-11-24 16:04:20] 2025-11-24 21:03:38,226 | INFO     | --------------------------------------------------
[2025-11-24 16:04:20] 2025-11-24 21:03:38,226 | INFO     | 
[2025-11-24 16:04:20] 2025-11-24 21:03:38,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 16:04:20] 2025-11-24 21:03:38,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | job 6894052256 has completed (purged errors)
[2025-11-24 16:04:20] 2025-11-24 21:03:38,249 | INFO     | overall cleanup function is called
[2025-11-24 16:04:20] 2025-11-24 21:03:39,259 | INFO     | --- collectZombieJob: --- 10, [3249706]
[2025-11-24 16:04:20] 2025-11-24 21:03:39,259 | INFO     | zombie collector waiting for pid 3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:39,259 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:04:20] 2025-11-24 21:03:39,259 | INFO     | collected zombie processes
[2025-11-24 16:04:20] 2025-11-24 21:03:39,260 | INFO     | will attempt to kill all subprocesses of pid=3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:39,720 | INFO     | process IDs to be killed: [3249706] (in reverse order)
[2025-11-24 16:04:20] 2025-11-24 21:03:39,913 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:04:20] 2025-11-24 21:03:39,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:04:20] 2025-11-24 21:03:39,926 | INFO     | did not find any defunct processes belonging to 3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:39,938 | INFO     | did not find any defunct processes belonging to 3249706
[2025-11-24 16:04:20] 2025-11-24 21:03:39,939 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:04:20] 2025-11-24 21:03:39,939 | INFO     | ready for new job
[2025-11-24 16:04:20] 2025-11-24 21:03:39,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:04:20] 2025-11-24 21:03:39,941 | INFO     | ***************************************
[2025-11-24 16:04:20] 2025-11-24 21:03:39,942 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:04:20] 2025-11-24 21:03:39,942 | INFO     | ***************************************
[2025-11-24 16:04:20] 2025-11-24 21:03:39,942 | INFO     | 
[2025-11-24 16:04:20] 2025-11-24 21:03:39,945 | INFO     | architecture information:
[2025-11-24 16:04:20] 2025-11-24 21:03:39,945 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:04:20] 2025-11-24 21:03:39,964 | INFO     | cat /etc/os-release:
[2025-11-24 16:04:20] NAME="CentOS Linux"
[2025-11-24 16:04:20] VERSION="7 (Core)"
[2025-11-24 16:04:20] ID="centos"
[2025-11-24 16:04:20] ID_LIKE="rhel fedora"
[2025-11-24 16:04:20] VERSION_ID="7"
[2025-11-24 16:04:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:04:20] ANSI_COLOR="0;31"
[2025-11-24 16:04:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:04:20] HOME_URL="https://www.centos.org/"
[2025-11-24 16:04:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:04:20] 
[2025-11-24 16:04:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:04:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:04:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:04:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:04:20] 
[2025-11-24 16:04:20] 2025-11-24 21:03:39,964 | INFO     | ***************************************
[2025-11-24 16:04:20] 2025-11-24 21:03:40,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 16:04:20] 2025-11-24 21:03:40,511 | INFO     | sufficient remaining disk space (71891419136 B)
[2025-11-24 16:04:20] 2025-11-24 21:03:40,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:04:20] 2025-11-24 21:03:40,511 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:04:20] 2025-11-24 21:03:40,511 | INFO     | update_server=False
[2025-11-24 16:04:20] 2025-11-24 21:03:40,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:04:20] 2025-11-24 21:03:40,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:04:20] 2025-11-24 21:03:40,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 16:04:20] 2025-11-24 21:03:40,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 16:04:20] 2025-11-24 21:03:40,691 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:04:20] 2025-11-24 21:03:40,691 | INFO     | will abort loop
[2025-11-24 16:04:20] 2025-11-24 21:03:40,724 | INFO     | all data control threads have been joined
[2025-11-24 16:04:20] 2025-11-24 21:03:41,018 | INFO     | all payload control threads have been joined
[2025-11-24 16:04:20] 2025-11-24 21:03:41,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:04:20] 2025-11-24 21:03:41,519 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,522 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,547 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,576 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,696 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,730 | INFO     | [data] control thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:41,750 | INFO     | [job] validate thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,027 | INFO     | [payload] control thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,168 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,170 | INFO     | all job control threads have been joined
[2025-11-24 16:04:20] 2025-11-24 21:03:42,399 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,521 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,705 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:42,908 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:43,184 | INFO     | [job] control thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:43,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:04:20] 2025-11-24 21:03:44,248 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:03:45,311 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:04:20] 2025-11-24 21:04:11,410 | INFO     | PID=3242097 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 16:04:20] 2025-11-24 21:04:11,410 | INFO     | .. there are 30 such processes running
[2025-11-24 16:04:20] 2025-11-24 21:04:11,410 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:04:20] 2025-11-24 21:04:11,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:04:20] 2025-11-24 21:04:11,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:04:20] 2025-11-24 21:04:13,169 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:04:20] 2025-11-24 21:04:14,752 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139985583667008)>', '<ExcThread(monitor, started 139985223132928)>']
[2025-11-24 16:04:20] 2025-11-24 21:04:15,435 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:04:20] 2025-11-24 21:04:15,435 | INFO     | [monitor] control thread has ended
[2025-11-24 16:04:20] 2025-11-24 21:04:19,778 | INFO     | all workflow threads have been joined
[2025-11-24 16:04:20] 2025-11-24 21:04:19,778 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:04:20] 2025-11-24 21:04:19,779 | INFO     | traces error code: 0
[2025-11-24 16:04:20] 2025-11-24 21:04:19,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:04:20] 2025-11-24 21:04:19,937 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:04:20] 2025-11-24 21:04:19,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:04:20] 2025-11-24 21:04:19,943 [wrapper] pilotpid: 3242097
[2025-11-24 16:04:20] 2025-11-24 21:04:19,946 [wrapper] Pilot exit status: 0
[2025-11-24 16:04:20] 2025-11-24 21:04:19,986 [wrapper] pandaids: 6894052256
[2025-11-24 16:04:20] 2025-11-24 21:04:20,054 [wrapper] cleanup supervisor_pilot 4160519 3242098
[2025-11-24 16:04:20] 2025-11-24 21:04:20,057 [wrapper] Test setup, not cleaning
[2025-11-24 16:04:20] 2025-11-24 21:04:20,066 [wrapper] apfmon messages muted
[2025-11-24 16:04:20] 2025-11-24 21:04:20,069 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:04:20] 2025-11-24 21:04:20,072 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:04:20]  *** Error codes and diagnostics ***
[2025-11-24 16:04:20]     "exeErrorCode": 0,
[2025-11-24 16:04:20]     "exeErrorDiag": "",
[2025-11-24 16:04:20]     "pilotErrorCode": 0,
[2025-11-24 16:04:20]     "pilotErrorDiag": "",
[2025-11-24 16:04:20]  *** Listing of results directory ***
[2025-11-24 16:04:20] total 626144
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:18 queuedata.json
[2025-11-24 16:04:20] -rwx------. 1 boincer umatlas     36292 Nov 23 05:19 runpilot2-wrapper.sh
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas       100 Nov 24 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:04:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 09:55 run_atlas
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas       105 Nov 24 09:55 job.xml
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas 294329666 Nov 24 09:55 EVNT.47523648._000005.pool.root.1
[2025-11-24 16:04:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 09:55 shared
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas    589956 Nov 24 09:55 input.tar.gz
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 09:55 start_atlas.sh
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas         0 Nov 24 09:55 boinc_lockfile
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas      2625 Nov 24 09:55 pandaJob.out
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas        57 Nov 24 09:55 setup.sh.local
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas    988283 Nov 24 09:56 agis_schedconf.cvmfs.json
[2025-11-24 16:04:20] drwx------. 5 boincer umatlas      4096 Nov 24 09:56 pilot3
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas 335976319 Nov 24 16:02 HITS.47523650._000104.pool.root.1
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas       532 Nov 24 16:02 boinc_task_state.xml
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas        95 Nov 24 16:03 pilot_heartbeat.json
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas      1043 Nov 24 16:03 memory_monitor_summary.json
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas   1516227 Nov 24 16:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas    569606 Nov 24 16:03 log.47523650._000104.job.log.tgz.1
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas      7821 Nov 24 16:03 heartbeat.json
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas      6845 Nov 24 16:04 init_data.xml
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 16:04 boinc_mmap_file
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas        29 Nov 24 16:04 wrapper_checkpoint.txt
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas      5010 Nov 24 16:04 pilotlog.txt
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas   2907765 Nov 24 16:04 log.47523650._000104.job.log.1
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas       357 Nov 24 16:04 output.list
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas       620 Nov 24 16:04 runtime_log
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas   3491840 Nov 24 16:04 result.tar.gz
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas      9348 Nov 24 16:04 runtime_log.err
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas       659 Nov 24 16:04 7N5MDm4MMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJnKKDmkZILRo.diag
[2025-11-24 16:04:20] -rw-r--r--. 1 boincer umatlas     21343 Nov 24 16:04 stderr.txt
[2025-11-24 16:04:20] HITS file was successfully produced:
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas 335976319 Nov 24 16:02 shared/HITS.pool.root.1
[2025-11-24 16:04:20]  *** Contents of shared directory: ***
[2025-11-24 16:04:20] total 619552
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas 294329666 Nov 24 09:55 ATLAS.root_0
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas    589956 Nov 24 09:55 input.tar.gz
[2025-11-24 16:04:20] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 09:55 start_atlas.sh
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas 335976319 Nov 24 16:02 HITS.pool.root.1
[2025-11-24 16:04:20] -rw-------. 1 boincer umatlas   3491840 Nov 24 16:04 result.tar.gz
16:04:21 (3238266): run_atlas exited; CPU time 103413.199177
16:04:21 (3238266): called boinc_finish(0)

</stderr_txt>
]]>

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