Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:49 (3507168): wrapper (7.7.26015): starting
00:00:49 (3507168): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 00:00:49] Arguments: --nthreads 12
[2025-11-24 00:00:49] Threads: 12
[2025-11-24 00:00:49] Checking for CVMFS
[2025-11-24 00:00:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:00:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:00:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:00:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:00:51] 2.13.2.0 4057 29574 190080 153233 2 353 20397051 39288832 8710 16776704 0 20464254 99.659 17321792 38832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:00:51] CVMFS is ok
[2025-11-24 00:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:00:51] Further information can be found at the LHC@home message board.
[2025-11-24 00:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:00:51] Checking for apptainer binary...
[2025-11-24 00:00:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:00:51] Running /usr/bin/apptainer --version
[2025-11-24 00:00:52] apptainer version 1.4.4-1.el9
[2025-11-24 00:00:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:00:52] c-210-24.aglt2.org
[2025-11-24 00:00:52] apptainer works
[2025-11-24 00:00:53] Set ATHENA_PROC_NUMBER=12
[2025-11-24 00:00:53] Set ATHENA_CORE_NUMBER=12
[2025-11-24 00:00:53] Starting ATLAS job with PandaID=6895356197
[2025-11-24 00:00:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:55:07]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:55:07] 2025-11-25 12:51:11,983 | INFO     | time since job start (114541s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:12,815 | INFO     | monitor loop #6569: job 0:6895356197 is in state 'finished'
[2025-11-25 07:55:07] 2025-11-25 12:51:12,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:55:07] 2025-11-25 12:51:13,990 | INFO     | time since job start (114543s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:15,405 | INFO     | monitor loop #6570: job 0:6895356197 is in state 'finished'
[2025-11-25 07:55:07] 2025-11-25 12:51:15,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:55:07] 2025-11-25 12:51:15,996 | INFO     | time since job start (114545s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:17,923 | INFO     | monitor loop #6571: job 0:6895356197 is in state 'finished'
[2025-11-25 07:55:07] 2025-11-25 12:51:17,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:55:07] 2025-11-25 12:51:18,003 | INFO     | time since job start (114548s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:20,010 | INFO     | time since job start (114550s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:20,428 | INFO     | monitor loop #6572: job 0:6895356197 is in state 'finished'
[2025-11-25 07:55:07] 2025-11-25 12:51:20,433 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:55:07] 2025-11-25 12:51:21,992 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 07:55:07] 2025-11-25 12:51:22,007 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.053925000001
[2025-11-25 07:55:07] 2025-11-25 12:51:22,020 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895356197/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:55:07] 2025-11-25 12:51:22,021 | INFO     | extracted standard info from prmon json
[2025-11-25 07:55:07] 2025-11-25 12:51:22,021 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:55:07] 2025-11-25 12:51:22,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:55:07] 2025-11-25 12:51:22,080 | INFO     | time since job start (114552s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:22,091 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:55:07] 2025-11-25 12:51:22,098 | INFO     | sum of square deviations: 2040612660228.1719
[2025-11-25 07:55:07] 2025-11-25 12:51:22,281 | INFO     | sum of deviations: 5048183155152.126
[2025-11-25 07:55:07] 2025-11-25 12:51:22,281 | INFO     | mean x: 1764017817.58111
[2025-11-25 07:55:07] 2025-11-25 12:51:22,282 | INFO     | mean y: 3487095.772145144
[2025-11-25 07:55:07] 2025-11-25 12:51:22,282 | INFO     | intersect: -4360440074.563772
[2025-11-25 07:55:07] 2025-11-25 12:51:22,289 | INFO     | chi2: 35.3841098978101
[2025-11-25 07:55:07] 2025-11-25 12:51:22,292 | INFO     | sum of square deviations: 2024326210578.2756
[2025-11-25 07:55:07] 2025-11-25 12:51:22,544 | INFO     | sum of deviations: 5955874110640.588
[2025-11-25 07:55:07] 2025-11-25 12:51:22,552 | INFO     | mean x: 1764017665.1027288
[2025-11-25 07:55:07] 2025-11-25 12:51:22,553 | INFO     | mean y: 3495593.4553237027
[2025-11-25 07:55:07] 2025-11-25 12:51:22,553 | INFO     | intersect: -5186511376.467151
[2025-11-25 07:55:07] 2025-11-25 12:51:22,555 | INFO     | chi2: 30.711988999096675
[2025-11-25 07:55:07] 2025-11-25 12:51:22,556 | INFO     | current chi2=30.711988999096675 (change=13.204008556966917 %)
[2025-11-25 07:55:07] 2025-11-25 12:51:22,556 | INFO     | right removable region: 1868
[2025-11-25 07:55:07] 2025-11-25 12:51:22,566 | INFO     | sum of square deviations: 2024316972738.2737
[2025-11-25 07:55:07] 2025-11-25 12:51:22,894 | INFO     | sum of deviations: 4151830866949.7197
[2025-11-25 07:55:07] 2025-11-25 12:51:22,894 | INFO     | mean x: 1764017970.1027288
[2025-11-25 07:55:07] 2025-11-25 12:51:22,894 | INFO     | mean y: 3495484.6420545746
[2025-11-25 07:55:07] 2025-11-25 12:51:22,894 | INFO     | intersect: -3614467688.496549
[2025-11-25 07:55:07] 2025-11-25 12:51:22,897 | INFO     | chi2: 31.536047125683503
[2025-11-25 07:55:07] 2025-11-25 12:51:22,907 | INFO     | current chi2=31.536047125683503 (change=10.875115364608199 %)
[2025-11-25 07:55:07] 2025-11-25 12:51:22,908 | INFO     | left removable region: 10
[2025-11-25 07:55:07] 2025-11-25 12:51:22,910 | INFO     | sum of square deviations: 1988785601660.3962
[2025-11-25 07:55:07] 2025-11-25 12:51:22,948 | INFO     | monitor loop #6573: job 0:6895356197 is in state 'finished'
[2025-11-25 07:55:07] 2025-11-25 12:51:22,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:55:07] 2025-11-25 12:51:24,066 | INFO     | sum of deviations: 4758706606335.843
[2025-11-25 07:55:07] 2025-11-25 12:51:24,066 | INFO     | mean x: 1764017939.6393971
[2025-11-25 07:55:07] 2025-11-25 12:51:24,107 | INFO     | mean y: 3509843.9176533907
[2025-11-25 07:55:07] 2025-11-25 12:51:24,107 | INFO     | intersect: -4217379434.4684086
[2025-11-25 07:55:07] 2025-11-25 12:51:24,110 | INFO     | chi2: 25.04796810139539
[2025-11-25 07:55:07] 2025-11-25 12:51:24,111 | INFO     | current memory leak: 2.39 B/s (using 1858 data points, chi2=25.05)
[2025-11-25 07:55:07] 2025-11-25 12:51:24,163 | INFO     | could have reported an average CPU frequency of 2598 MHz (65 samples)
[2025-11-25 07:55:07] 2025-11-25 12:51:24,163 | INFO     | ..............................
[2025-11-25 07:55:07] 2025-11-25 12:51:24,163 | INFO     | . Timing measurements:
[2025-11-25 07:55:07] 2025-11-25 12:51:24,163 | INFO     | . get job = 0 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,163 | INFO     | . initial setup = 6 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | . payload setup = 46 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | . stage-in = 0 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | . payload execution = 114345 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | . stage-out = 26 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | . log creation = 13 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,164 | INFO     | ..............................
[2025-11-25 07:55:07] 2025-11-25 12:51:24,349 | INFO     | time since job start (114554s) is within the limit (172800.0s)
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | 
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | job summary report
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | --------------------------------------------------
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | PanDA job id: 6895356197
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | task id: 47556137
[2025-11-25 07:55:07] 2025-11-25 12:51:24,951 | INFO     | errors: (none)
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | pilot state: finished 
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | transexitcode: 0
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | exeerrorcode: 0
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | exeerrordiag: 
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | exitcode: 0
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | exitmsg: OK
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | cpuconsumptiontime: 308621 s
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | nevents: 1000
[2025-11-25 07:55:07] 2025-11-25 12:51:24,952 | INFO     | neventsw: 0
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | pid: 3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | pgrp: 3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | corecount: 12
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | event service: False
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | sizes: {0: 2298529, 1: 2298613, 2: 2298812, 13: 2298812, 24: 2298868, 32: 2299158, 35: 2299314, 114397: 2375834, 114424: 2385624, 114426: 2385680, 114486: 2386022}
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | --------------------------------------------------
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | 
[2025-11-25 07:55:07] 2025-11-25 12:51:24,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 07:55:07] 2025-11-25 12:51:25,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:55:07] 2025-11-25 12:51:25,116 | INFO     | job 6895356197 has completed (purged errors)
[2025-11-25 07:55:07] 2025-11-25 12:51:25,117 | INFO     | overall cleanup function is called
[2025-11-25 07:55:07] 2025-11-25 12:51:26,205 | INFO     | --- collectZombieJob: --- 10, [3517605]
[2025-11-25 07:55:07] 2025-11-25 12:51:26,205 | INFO     | zombie collector waiting for pid 3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:26,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:55:07] 2025-11-25 12:51:26,206 | INFO     | collected zombie processes
[2025-11-25 07:55:07] 2025-11-25 12:51:26,206 | INFO     | will attempt to kill all subprocesses of pid=3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:29,387 | INFO     | process IDs to be killed: [3517605] (in reverse order)
[2025-11-25 07:55:07] 2025-11-25 12:51:29,473 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:55:07] 2025-11-25 12:51:29,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:55:07] 2025-11-25 12:51:29,601 | INFO     | did not find any defunct processes belonging to 3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:29,710 | INFO     | did not find any defunct processes belonging to 3517605
[2025-11-25 07:55:07] 2025-11-25 12:51:29,782 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:55:07] 2025-11-25 12:51:29,783 | INFO     | ready for new job
[2025-11-25 07:55:07] 2025-11-25 12:51:29,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:55:07] 2025-11-25 12:51:29,810 | INFO     | ***************************************
[2025-11-25 07:55:07] 2025-11-25 12:51:29,810 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:55:07] 2025-11-25 12:51:29,810 | INFO     | ***************************************
[2025-11-25 07:55:07] 2025-11-25 12:51:29,811 | INFO     | 
[2025-11-25 07:55:07] 2025-11-25 12:51:29,862 | INFO     | architecture information:
[2025-11-25 07:55:07] 2025-11-25 12:51:29,879 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:55:07] 2025-11-25 12:51:30,166 | INFO     | cat /etc/os-release:
[2025-11-25 07:55:07] NAME="CentOS Linux"
[2025-11-25 07:55:07] VERSION="7 (Core)"
[2025-11-25 07:55:07] ID="centos"
[2025-11-25 07:55:07] ID_LIKE="rhel fedora"
[2025-11-25 07:55:07] VERSION_ID="7"
[2025-11-25 07:55:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:55:07] ANSI_COLOR="0;31"
[2025-11-25 07:55:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:55:07] HOME_URL="https://www.centos.org/"
[2025-11-25 07:55:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:55:07] 
[2025-11-25 07:55:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:55:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:55:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:55:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:55:07] 
[2025-11-25 07:55:07] 2025-11-25 12:51:30,167 | INFO     | ***************************************
[2025-11-25 07:55:07] 2025-11-25 12:51:30,670 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 07:55:07] 2025-11-25 12:51:31,002 | INFO     | sufficient remaining disk space (49579819008 B)
[2025-11-25 07:55:07] 2025-11-25 12:51:31,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:55:07] 2025-11-25 12:51:31,002 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:55:07] 2025-11-25 12:51:31,002 | INFO     | update_server=False
[2025-11-25 07:55:07] 2025-11-25 12:51:31,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:55:07] 2025-11-25 12:51:31,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:55:07] 2025-11-25 12:51:31,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:55:07] 2025-11-25 12:51:31,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:55:07] 2025-11-25 12:51:31,273 | INFO     | all data control threads have been joined
[2025-11-25 07:55:07] 2025-11-25 12:51:31,650 | INFO     | all payload control threads have been joined
[2025-11-25 07:55:07] 2025-11-25 12:51:31,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:55:07] 2025-11-25 12:51:31,744 | INFO     | aborting loop
[2025-11-25 07:55:07] 2025-11-25 12:51:31,834 | INFO     | all job control threads have been joined
[2025-11-25 07:55:07] 2025-11-25 12:51:32,008 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,029 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,208 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,279 | INFO     | [data] control thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,449 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,574 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,656 | INFO     | [payload] control thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,750 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,751 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,759 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,840 | INFO     | [job] control thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:32,935 | INFO     | [job] validate thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:33,048 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:33,521 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:35,178 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:55:07] 2025-11-25 12:51:53,219 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:55:07] 2025-11-25 12:51:53,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655828956992)>', '<ExcThread(monitor, started 140655179314944)>']
[2025-11-25 07:55:07] 2025-11-25 12:51:58,730 | INFO     | all workflow threads have been joined
[2025-11-25 07:55:07] 2025-11-25 12:51:58,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:55:07] 2025-11-25 12:51:58,731 | INFO     | traces error code: 0
[2025-11-25 07:55:07] 2025-11-25 12:51:58,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:55:07] 2025-11-25 12:52:03,550 | INFO     | PID=3510973 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:55:07] 2025-11-25 12:52:03,550 | INFO     | .. there are 9 such processes running
[2025-11-25 07:55:07] 2025-11-25 12:52:03,573 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:55:07] 2025-11-25 12:52:03,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:55:07] 2025-11-25 12:52:03,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:55:07] 2025-11-25 12:52:03,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:55:07] 2025-11-25 12:52:03,574 | INFO     | [monitor] control thread has ended
[2025-11-25 07:55:07] 2025-11-25 12:52:03,791 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:55:07] 2025-11-25 12:52:03,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:55:07] 2025-11-25 12:52:03,799 [wrapper] pilotpid: 3510973
[2025-11-25 07:55:07] 2025-11-25 12:52:03,803 [wrapper] Pilot exit status: 0
[2025-11-25 07:55:07] 2025-11-25 12:52:04,014 [wrapper] pandaids: 6895356197
[2025-11-25 07:55:07] 2025-11-25 12:52:04,900 [wrapper] cleanup supervisor_pilot 1943946 3510974
[2025-11-25 07:55:07] 2025-11-25 12:52:04,955 [wrapper] Test setup, not cleaning
[2025-11-25 07:55:07] 2025-11-25 12:52:05,015 [wrapper] apfmon messages muted
[2025-11-25 07:55:07] 2025-11-25 12:52:05,068 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:55:07] 2025-11-25 12:52:05,146 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:55:07]  *** Error codes and diagnostics ***
[2025-11-25 07:55:07]     "exeErrorCode": 0,
[2025-11-25 07:55:07]     "exeErrorDiag": "",
[2025-11-25 07:55:07]     "pilotErrorCode": 0,
[2025-11-25 07:55:07]     "pilotErrorDiag": "",
[2025-11-25 07:55:07]  *** Listing of results directory ***
[2025-11-25 07:55:07] total 1325948
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:28 queuedata.json
[2025-11-25 07:55:07] -rwx------. 1 boincer umatlas     36292 Nov 23 05:29 runpilot2-wrapper.sh
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:55:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:00 run_atlas
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:00 job.xml
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas 410640263 Nov 24 00:00 EVNT.47483658._000690.pool.root.1
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:00 start_atlas.sh
[2025-11-25 07:55:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:00 shared
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:00 input.tar.gz
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:00 boinc_lockfile
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:00 pandaJob.out
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas        57 Nov 24 00:00 setup.sh.local
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-25 07:55:07] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas       533 Nov 25 06:37 boinc_task_state.xml
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas 908857079 Nov 25 07:44 HITS.47556137._006858.pool.root.1
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas      1071 Nov 25 07:49 memory_monitor_summary.json
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas   1516240 Nov 25 07:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas   3182508 Nov 25 07:50 log.47556137._006858.job.log.tgz.1
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas      8674 Nov 25 07:51 heartbeat.json
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas        95 Nov 25 07:52 pilot_heartbeat.json
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas       822 Nov 25 07:52 pilotlog.txt
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas  13998558 Nov 25 07:52 log.47556137._006858.job.log.1
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas       353 Nov 25 07:52 output.list
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas       620 Nov 25 07:52 runtime_log
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas  17203200 Nov 25 07:52 result.tar.gz
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas      9346 Nov 25 07:52 runtime_log.err
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas       668 Nov 25 07:52 NR1LDm5WMh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsnKKDmgEstEn.diag
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 07:55 init_data.xml
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 07:55 boinc_mmap_file
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas        29 Nov 25 07:55 wrapper_checkpoint.txt
[2025-11-25 07:55:07] -rw-r--r--. 1 boincer umatlas     21832 Nov 25 07:55 stderr.txt
[2025-11-25 07:55:07] HITS file was successfully produced:
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas 908857079 Nov 25 07:44 shared/HITS.pool.root.1
[2025-11-25 07:55:07]  *** Contents of shared directory: ***
[2025-11-25 07:55:07] total 1305976
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas 410640263 Nov 24 00:00 ATLAS.root_0
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:00 start_atlas.sh
[2025-11-25 07:55:07] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 00:00 input.tar.gz
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas 908857079 Nov 25 07:44 HITS.pool.root.1
[2025-11-25 07:55:07] -rw-------. 1 boincer umatlas  17203200 Nov 25 07:52 result.tar.gz
07:55:09 (3507168): run_atlas exited; CPU time 309779.259513
07:55:09 (3507168): called boinc_finish(0)

</stderr_txt>
]]>

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