Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:47 (742842): wrapper (7.7.26015): starting
00:11:47 (742842): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:11:47] Arguments: --nthreads 9
[2025-11-24 00:11:47] Threads: 9
[2025-11-24 00:11:47] Checking for CVMFS
[2025-11-24 00:11:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:11:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:11:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:11:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:11:50] 2.13.3.0 10978 26687 348492 153234 3 82 28065021 40960001 16089 16776704 0 60818851 99.518 76444557 37888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:11:50] CVMFS is ok
[2025-11-24 00:11:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:11:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:11:50] Further information can be found at the LHC@home message board.
[2025-11-24 00:11:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:11:50] Checking for apptainer binary...
[2025-11-24 00:11:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:11:50] Running /usr/bin/apptainer --version
[2025-11-24 00:11:50] apptainer version 1.4.4-1.el9
[2025-11-24 00:11:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:11:51] c6-8-12-1.aglt2.org
[2025-11-24 00:11:51] apptainer works
[2025-11-24 00:11:51] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:11:51] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:11:51] Starting ATLAS job with PandaID=6895356177
[2025-11-24 00:11:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 16:26:11]  *** The last 200 lines of the pilot log: ***
[2025-11-24 16:26:11] 2025-11-24 21:25:37,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 16:26:11] 2025-11-24 21:25:37,492 | INFO     | time since job start (58359s) is within the limit (172800.0s)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,497 | INFO     | fitting pss+swap vs Time
[2025-11-24 16:26:11] 2025-11-24 21:25:37,498 | INFO     | sum of square deviations: 269217586411.40533
[2025-11-24 16:26:11] 2025-11-24 21:25:37,583 | INFO     | sum of deviations: 2982084704201.1055
[2025-11-24 16:26:11] 2025-11-24 21:25:37,584 | INFO     | mean x: 1763990419.374214
[2025-11-24 16:26:11] 2025-11-24 21:25:37,584 | INFO     | mean y: 3047606.9716981133
[2025-11-24 16:26:11] 2025-11-24 21:25:37,584 | INFO     | intersect: -19536422002.322304
[2025-11-24 16:26:11] 2025-11-24 21:25:37,585 | INFO     | chi2: 10.141704829055833
[2025-11-24 16:26:11] 2025-11-24 21:25:37,586 | INFO     | sum of square deviations: 265007103941.25146
[2025-11-24 16:26:11] 2025-11-24 21:25:37,675 | INFO     | sum of deviations: 3343541132464.5903
[2025-11-24 16:26:11] 2025-11-24 21:25:37,676 | INFO     | mean x: 1763990266.8840885
[2025-11-24 16:26:11] 2025-11-24 21:25:37,676 | INFO     | mean y: 3060700.105374078
[2025-11-24 16:26:11] 2025-11-24 21:25:37,676 | INFO     | intersect: -22252848393.945335
[2025-11-24 16:26:11] 2025-11-24 21:25:37,682 | INFO     | chi2: 6.637065995732238
[2025-11-24 16:26:11] 2025-11-24 21:25:37,682 | INFO     | current chi2=6.637065995732238 (change=34.55670316180823 %)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,683 | INFO     | sum of square deviations: 260840761833.408
[2025-11-24 16:26:11] 2025-11-24 21:25:37,715 | INFO     | sum of deviations: 3428330237192.304
[2025-11-24 16:26:11] 2025-11-24 21:25:37,716 | INFO     | mean x: 1763990114.3940678
[2025-11-24 16:26:11] 2025-11-24 21:25:37,716 | INFO     | mean y: 3063796.2680084747
[2025-11-24 16:26:11] 2025-11-24 21:25:37,716 | INFO     | intersect: -23181735254.226624
[2025-11-24 16:26:11] 2025-11-24 21:25:37,717 | INFO     | chi2: 6.176505119193753
[2025-11-24 16:26:11] 2025-11-24 21:25:37,717 | INFO     | current chi2=6.176505119193753 (change=6.93922400100638 %)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,717 | INFO     | right removable region: 943
[2025-11-24 16:26:11] 2025-11-24 21:25:37,720 | INFO     | sum of square deviations: 265006187361.54477
[2025-11-24 16:26:11] 2025-11-24 21:25:37,750 | INFO     | sum of deviations: 2595554490948.607
[2025-11-24 16:26:11] 2025-11-24 21:25:37,750 | INFO     | mean x: 1763990571.8809273
[2025-11-24 16:26:11] 2025-11-24 21:25:37,750 | INFO     | mean y: 3061600.359325606
[2025-11-24 16:26:11] 2025-11-24 21:25:37,750 | INFO     | intersect: -17274020479.954914
[2025-11-24 16:26:11] 2025-11-24 21:25:37,756 | INFO     | chi2: 6.3658402698316525
[2025-11-24 16:26:11] 2025-11-24 21:25:37,757 | INFO     | current chi2=6.3658402698316525 (change=37.23106344414979 %)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,758 | INFO     | sum of square deviations: 260838871026.32095
[2025-11-24 16:26:11] 2025-11-24 21:25:37,789 | INFO     | sum of deviations: 2294185419605.718
[2025-11-24 16:26:11] 2025-11-24 21:25:37,790 | INFO     | mean x: 1763990724.3887713
[2025-11-24 16:26:11] 2025-11-24 21:25:37,790 | INFO     | mean y: 3072622.973516949
[2025-11-24 16:26:11] 2025-11-24 21:25:37,790 | INFO     | intersect: -15511953125.639223
[2025-11-24 16:26:11] 2025-11-24 21:25:37,791 | INFO     | chi2: 4.175886310016446
[2025-11-24 16:26:11] 2025-11-24 21:25:37,791 | INFO     | current chi2=4.175886310016446 (change=34.40164796772573 %)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,792 | INFO     | sum of square deviations: 256715980260.0342
[2025-11-24 16:26:11] 2025-11-24 21:25:37,827 | INFO     | sum of deviations: 2213501975683.8477
[2025-11-24 16:26:11] 2025-11-24 21:25:37,827 | INFO     | mean x: 1763990876.887114
[2025-11-24 16:26:11] 2025-11-24 21:25:37,827 | INFO     | mean y: 3075606.5740149096
[2025-11-24 16:26:11] 2025-11-24 21:25:37,827 | INFO     | intersect: -15206718840.670145
[2025-11-24 16:26:11] 2025-11-24 21:25:37,828 | INFO     | chi2: 4.123150678551265
[2025-11-24 16:26:11] 2025-11-24 21:25:37,828 | INFO     | current chi2=4.123150678551265 (change=1.2628608048712204 %)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,828 | INFO     | left removable region: 30
[2025-11-24 16:26:11] 2025-11-24 21:25:37,833 | INFO     | sum of square deviations: 235976821958.32602
[2025-11-24 16:26:11] 2025-11-24 21:25:37,863 | INFO     | sum of deviations: 2505723830118.4375
[2025-11-24 16:26:11] 2025-11-24 21:25:37,864 | INFO     | mean x: 1763990998.9025192
[2025-11-24 16:26:11] 2025-11-24 21:25:37,864 | INFO     | mean y: 3097785.982475356
[2025-11-24 16:26:11] 2025-11-24 21:25:37,864 | INFO     | intersect: -18727870134.43923
[2025-11-24 16:26:11] 2025-11-24 21:25:37,869 | INFO     | chi2: 0.06139660575900934
[2025-11-24 16:26:11] 2025-11-24 21:25:37,869 | INFO     | current memory leak: 10.62 B/s (using 913 data points, chi2=0.06)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | could have reported an average CPU frequency of 2835 MHz (35 samples)
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | ..............................
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | . Timing measurements:
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | . get job = 0 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | . initial setup = 4 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,870 | INFO     | . payload setup = 53 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,871 | INFO     | . stage-in = 0 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,871 | INFO     | . payload execution = 58203 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,871 | INFO     | . stage-out = 3 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,871 | INFO     | . log creation = 0 s
[2025-11-24 16:26:11] 2025-11-24 21:25:37,871 | INFO     | ..............................
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | 
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | job summary report
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | --------------------------------------------------
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | PanDA job id: 6895356177
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | task id: 47556137
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | errors: (none)
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | pilot state: finished 
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | transexitcode: 0
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | exeerrorcode: 0
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | exeerrordiag: 
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | exitcode: 0
[2025-11-24 16:26:11] 2025-11-24 21:25:38,213 | INFO     | exitmsg: OK
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | cpuconsumptiontime: 241685 s
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | nevents: 1000
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | neventsw: 0
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | pid: 757922
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | pgrp: 757922
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | corecount: 9
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | event service: False
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | sizes: {0: 2298529, 1: 2298613, 2: 2298812, 13: 2298812, 24: 2298868, 35: 2298896, 40: 2299314, 46: 2299342, 58260: 2352127, 58265: 2361912, 58267: 2361968, 58277:
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | --------------------------------------------------
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | 
[2025-11-24 16:26:11] 2025-11-24 21:25:38,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,287 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 16:26:11] 2025-11-24 21:25:38,288 | INFO     | job 6895356177 has completed (purged errors)
[2025-11-24 16:26:11] 2025-11-24 21:25:38,289 | INFO     | overall cleanup function is called
[2025-11-24 16:26:11] 2025-11-24 21:25:39,306 | INFO     | --- collectZombieJob: --- 10, [757922]
[2025-11-24 16:26:11] 2025-11-24 21:25:39,306 | INFO     | zombie collector waiting for pid 757922
[2025-11-24 16:26:11] 2025-11-24 21:25:39,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 16:26:11] 2025-11-24 21:25:39,306 | INFO     | collected zombie processes
[2025-11-24 16:26:11] 2025-11-24 21:25:39,306 | INFO     | will attempt to kill all subprocesses of pid=757922
[2025-11-24 16:26:11] 2025-11-24 21:25:39,676 | INFO     | process IDs to be killed: [757922] (in reverse order)
[2025-11-24 16:26:11] 2025-11-24 21:25:39,795 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 16:26:11] 2025-11-24 21:25:39,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 16:26:11] 2025-11-24 21:25:39,808 | INFO     | did not find any defunct processes belonging to 757922
[2025-11-24 16:26:11] 2025-11-24 21:25:39,819 | INFO     | did not find any defunct processes belonging to 757922
[2025-11-24 16:26:11] 2025-11-24 21:25:39,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 16:26:11] 2025-11-24 21:25:39,820 | INFO     | ready for new job
[2025-11-24 16:26:11] 2025-11-24 21:25:39,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 16:26:11] 2025-11-24 21:25:39,824 | INFO     | ***************************************
[2025-11-24 16:26:11] 2025-11-24 21:25:39,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 16:26:11] 2025-11-24 21:25:39,825 | INFO     | ***************************************
[2025-11-24 16:26:11] 2025-11-24 21:25:39,825 | INFO     | 
[2025-11-24 16:26:11] 2025-11-24 21:25:39,827 | INFO     | architecture information:
[2025-11-24 16:26:11] 2025-11-24 21:25:39,828 | INFO     | executing command: cat /etc/os-release
[2025-11-24 16:26:11] 2025-11-24 21:25:39,848 | INFO     | cat /etc/os-release:
[2025-11-24 16:26:11] NAME="CentOS Linux"
[2025-11-24 16:26:11] VERSION="7 (Core)"
[2025-11-24 16:26:11] ID="centos"
[2025-11-24 16:26:11] ID_LIKE="rhel fedora"
[2025-11-24 16:26:11] VERSION_ID="7"
[2025-11-24 16:26:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 16:26:11] ANSI_COLOR="0;31"
[2025-11-24 16:26:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 16:26:11] HOME_URL="https://www.centos.org/"
[2025-11-24 16:26:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 16:26:11] 
[2025-11-24 16:26:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 16:26:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 16:26:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 16:26:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 16:26:11] 
[2025-11-24 16:26:11] 2025-11-24 21:25:39,848 | INFO     | ***************************************
[2025-11-24 16:26:11] 2025-11-24 21:25:40,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-24 16:26:11] 2025-11-24 21:25:40,392 | INFO     | sufficient remaining disk space (55898537984 B)
[2025-11-24 16:26:11] 2025-11-24 21:25:40,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 16:26:11] 2025-11-24 21:25:40,394 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 16:26:11] 2025-11-24 21:25:40,394 | INFO     | update_server=False
[2025-11-24 16:26:11] 2025-11-24 21:25:40,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 16:26:11] 2025-11-24 21:25:40,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:26:11] 2025-11-24 21:25:40,395 | INFO     | aborting loop
[2025-11-24 16:26:11] 2025-11-24 21:25:40,755 | INFO     | [monitor] cgroup control has ended
[2025-11-24 16:26:11] 2025-11-24 21:25:41,051 | INFO     | all job control threads have been joined
[2025-11-24 16:26:11] 2025-11-24 21:25:41,104 | INFO     | all data control threads have been joined
[2025-11-24 16:26:11] 2025-11-24 21:25:41,401 | INFO     | [job] job monitor thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:41,404 | INFO     | [job] retrieve thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:41,601 | INFO     | [payload] validate_post thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:41,605 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:41,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 16:26:11] 2025-11-24 21:25:41,780 | INFO     | all payload control threads have been joined
[2025-11-24 16:26:11] 2025-11-24 21:25:41,898 | INFO     | [data] copytool_in thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,057 | INFO     | [job] control thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,062 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,073 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,110 | INFO     | [data] control thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,713 | INFO     | [payload] failed_post thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,786 | INFO     | [payload] control thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:42,902 | INFO     | [job] validate thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:43,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 16:26:11] 2025-11-24 21:25:43,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 16:26:11] 2025-11-24 21:25:43,654 | INFO     | [data] copytool_out thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:44,019 | INFO     | [job] queue monitor thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:47,519 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 16:26:11] 2025-11-24 21:25:47,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800709277504)>', '<ExcThread(monitor, started 139800220780288)>']
[2025-11-24 16:26:11] 2025-11-24 21:25:53,024 | INFO     | all workflow threads have been joined
[2025-11-24 16:26:11] 2025-11-24 21:25:53,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 16:26:11] 2025-11-24 21:25:53,025 | INFO     | traces error code: 0
[2025-11-24 16:26:11] 2025-11-24 21:25:53,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 16:26:11] 2025-11-24 21:26:10,932 | INFO     | PID=747176 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 16:26:11] 2025-11-24 21:26:10,933 | INFO     | .. there are 17 such processes running
[2025-11-24 16:26:11] 2025-11-24 21:26:10,933 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 16:26:11] 2025-11-24 21:26:10,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 16:26:11] 2025-11-24 21:26:10,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 16:26:11] 2025-11-24 21:26:10,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 16:26:11] 2025-11-24 21:26:10,934 | INFO     | [monitor] control thread has ended
[2025-11-24 16:26:11] 2025-11-24 21:26:11,093 [wrapper] ==== pilot stdout END ====
[2025-11-24 16:26:11] 2025-11-24 21:26:11,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 16:26:11] 2025-11-24 21:26:11,098 [wrapper] pilotpid: 747176
[2025-11-24 16:26:11] 2025-11-24 21:26:11,103 [wrapper] Pilot exit status: 0
[2025-11-24 16:26:11] 2025-11-24 21:26:11,130 [wrapper] pandaids: 6895356177
[2025-11-24 16:26:11] 2025-11-24 21:26:11,186 [wrapper] cleanup supervisor_pilot 3019212 747177
[2025-11-24 16:26:11] 2025-11-24 21:26:11,189 [wrapper] Test setup, not cleaning
[2025-11-24 16:26:11] 2025-11-24 21:26:11,199 [wrapper] apfmon messages muted
[2025-11-24 16:26:11] 2025-11-24 21:26:11,203 [wrapper] ==== wrapper stdout END ====
[2025-11-24 16:26:11] 2025-11-24 21:26:11,206 [wrapper] ==== wrapper stderr END ====
[2025-11-24 16:26:11]  *** Error codes and diagnostics ***
[2025-11-24 16:26:11]     "exeErrorCode": 0,
[2025-11-24 16:26:11]     "exeErrorDiag": "",
[2025-11-24 16:26:11]     "pilotErrorCode": 0,
[2025-11-24 16:26:11]     "pilotErrorDiag": "",
[2025-11-24 16:26:11]  *** Listing of results directory ***
[2025-11-24 16:26:11] total 1332200
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 05:16 pilot3.tar.gz
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 05:21 queuedata.json
[2025-11-24 16:26:11] -rwx------. 1 boincer umatlas     36292 Nov 23 05:22 runpilot2-wrapper.sh
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 16:26:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:11 run_atlas
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:11 job.xml
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas 410718558 Nov 24 00:11 EVNT.47483658._000688.pool.root.1
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-24 16:26:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:11 shared
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:11 input.tar.gz
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:11 boinc_lockfile
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:11 pandaJob.out
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas        57 Nov 24 00:11 setup.sh.local
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas    989786 Nov 24 00:12 agis_schedconf.cvmfs.json
[2025-11-24 16:26:11] drwx------. 5 boincer umatlas      4096 Nov 24 00:12 pilot3
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas       533 Nov 24 16:15 boinc_task_state.xml
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas      6844 Nov 24 16:19 init_data.xml
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas 929652179 Nov 24 16:24 HITS.47556137._006838.pool.root.1
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas      1057 Nov 24 16:25 memory_monitor_summary.json
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas   1516227 Nov 24 16:25 agis_ddmendpoints.agis.ALL.json
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas   2239418 Nov 24 16:25 log.47556137._006838.job.log.tgz.1
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas      8624 Nov 24 16:25 heartbeat.json
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 16:26 boinc_mmap_file
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas        29 Nov 24 16:26 wrapper_checkpoint.txt
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas        95 Nov 24 16:26 pilot_heartbeat.json
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas       822 Nov 24 16:26 pilotlog.txt
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas   7700716 Nov 24 16:26 log.47556137._006838.job.log.1
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas       353 Nov 24 16:26 output.list
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas       620 Nov 24 16:26 runtime_log
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas   9963520 Nov 24 16:26 result.tar.gz
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas      9348 Nov 24 16:26 runtime_log.err
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas       662 Nov 24 16:26 P6yKDm4PMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9UIKDmR0EbDm.diag
[2025-11-24 16:26:11] -rw-r--r--. 1 boincer umatlas     21178 Nov 24 16:26 stderr.txt
[2025-11-24 16:26:11] HITS file was successfully produced:
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas 929652179 Nov 24 16:24 shared/HITS.pool.root.1
[2025-11-24 16:26:11]  *** Contents of shared directory: ***
[2025-11-24 16:26:11] total 1319296
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas 410718558 Nov 24 00:11 ATLAS.root_0
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:11 start_atlas.sh
[2025-11-24 16:26:11] -rw-r--r--. 2 boincer umatlas    590096 Nov 24 00:11 input.tar.gz
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas 929652179 Nov 24 16:24 HITS.pool.root.1
[2025-11-24 16:26:11] -rw-------. 1 boincer umatlas   9963520 Nov 24 16:26 result.tar.gz
16:26:12 (742842): run_atlas exited; CPU time 242579.230060
16:26:12 (742842): called boinc_finish(0)

</stderr_txt>
]]>

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