Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:05 (1808195): wrapper (7.7.26015): starting
00:02:05 (1808195): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:02:05] Arguments: --nthreads 9
[2025-11-24 00:02:05] Threads: 9
[2025-11-24 00:02:05] Checking for CVMFS
[2025-11-24 00:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:02:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:02:09] 2.13.3.0 8749 26720 302772 153233 1 149 19402179 21042177 22025 16776704 0 113867393 99.551 130791528 31396 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:02:09] CVMFS is ok
[2025-11-24 00:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:02:09] Further information can be found at the LHC@home message board.
[2025-11-24 00:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:02:09] Checking for apptainer binary...
[2025-11-24 00:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:02:09] Running /usr/bin/apptainer --version
[2025-11-24 00:02:09] apptainer version 1.4.4-1.el9
[2025-11-24 00:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:02:10] c-16-10.aglt2.org
[2025-11-24 00:02:10] apptainer works
[2025-11-24 00:02:10] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:02:10] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:02:10] Starting ATLAS job with PandaID=6895350650
[2025-11-24 00:02:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:21:27]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:21:27] 2025-11-26 03:20:27,061 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:21:27] 2025-11-26 03:20:27,430 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 22:21:27] 2025-11-26 03:20:27,440 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2699.9654
[2025-11-25 22:21:27] 2025-11-26 03:20:27,449 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895350650/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:21:27] 2025-11-26 03:20:27,450 | INFO     | extracted standard info from prmon json
[2025-11-25 22:21:27] 2025-11-26 03:20:27,451 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:21:27] 2025-11-26 03:20:27,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:21:27] 2025-11-26 03:20:27,533 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:21:27] 2025-11-26 03:20:27,538 | INFO     | sum of square deviations: 6315963388040.126
[2025-11-25 22:21:27] 2025-11-26 03:20:27,569 | INFO     | time since job start (166621s) is within the limit (172800.0s)
[2025-11-25 22:21:27] 2025-11-26 03:20:27,771 | INFO     | sum of deviations: 21750613267435.45
[2025-11-25 22:21:27] 2025-11-26 03:20:27,772 | INFO     | mean x: 1764043927.0501647
[2025-11-25 22:21:27] 2025-11-26 03:20:27,772 | INFO     | mean y: 3139223.412669352
[2025-11-25 22:21:27] 2025-11-26 03:20:27,772 | INFO     | intersect: -6071791058.275101
[2025-11-25 22:21:27] 2025-11-26 03:20:27,776 | INFO     | chi2: 11.51132031569667
[2025-11-25 22:21:27] 2025-11-26 03:20:27,781 | INFO     | sum of square deviations: 6281337036782.098
[2025-11-25 22:21:27] 2025-11-26 03:20:28,011 | INFO     | sum of deviations: 22780638352487.348
[2025-11-25 22:21:27] 2025-11-26 03:20:28,012 | INFO     | mean x: 1764043774.552091
[2025-11-25 22:21:27] 2025-11-26 03:20:28,012 | INFO     | mean y: 3143759.6071166545
[2025-11-25 22:21:27] 2025-11-26 03:20:28,012 | INFO     | intersect: -6394545622.559048
[2025-11-25 22:21:27] 2025-11-26 03:20:28,016 | INFO     | chi2: 8.156425482243655
[2025-11-25 22:21:27] 2025-11-26 03:20:28,017 | INFO     | current chi2=8.156425482243655 (change=29.14430961388789 %)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,021 | INFO     | sum of square deviations: 6246837478599.047
[2025-11-25 22:21:27] 2025-11-26 03:20:28,254 | INFO     | sum of deviations: 23503301002139.723
[2025-11-25 22:21:27] 2025-11-26 03:20:28,255 | INFO     | mean x: 1764043622.0540242
[2025-11-25 22:21:27] 2025-11-26 03:20:28,255 | INFO     | mean y: 3146952.954428519
[2025-11-25 22:21:27] 2025-11-26 03:20:28,255 | INFO     | intersect: -6633947156.19771
[2025-11-25 22:21:27] 2025-11-26 03:20:28,259 | INFO     | chi2: 6.172352128789056
[2025-11-25 22:21:27] 2025-11-26 03:20:28,259 | INFO     | current chi2=6.172352128789056 (change=24.325280207290312 %)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,260 | INFO     | right removable region: 2720
[2025-11-25 22:21:27] 2025-11-26 03:20:28,264 | INFO     | sum of square deviations: 6281335287302.098
[2025-11-25 22:21:27] 2025-11-26 03:20:28,486 | INFO     | sum of deviations: 20704152135973.863
[2025-11-25 22:21:27] 2025-11-26 03:20:28,486 | INFO     | mean x: 1764044079.552091
[2025-11-25 22:21:27] 2025-11-26 03:20:28,487 | INFO     | mean y: 3143831.2791636097
[2025-11-25 22:21:27] 2025-11-26 03:20:28,487 | INFO     | intersect: -5811390073.867224
[2025-11-25 22:21:27] 2025-11-26 03:20:28,491 | INFO     | chi2: 8.38811837370897
[2025-11-25 22:21:27] 2025-11-26 03:20:28,491 | INFO     | current chi2=8.38811837370897 (change=27.1315701095464 %)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,495 | INFO     | sum of square deviations: 6246835142662.801
[2025-11-25 22:21:27] 2025-11-26 03:20:28,714 | INFO     | sum of deviations: 20291596425917.344
[2025-11-25 22:21:27] 2025-11-26 03:20:28,715 | INFO     | mean x: 1764044232.0514517
[2025-11-25 22:21:27] 2025-11-26 03:20:28,715 | INFO     | mean y: 3145654.3259830945
[2025-11-25 22:21:27] 2025-11-26 03:20:28,715 | INFO     | intersect: -5726999741.98699
[2025-11-25 22:21:27] 2025-11-26 03:20:28,718 | INFO     | chi2: 7.996349372917094
[2025-11-25 22:21:27] 2025-11-26 03:20:28,719 | INFO     | current chi2=7.996349372917094 (change=4.670523034341105 %)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,719 | INFO     | left removable region: 20
[2025-11-25 22:21:27] 2025-11-26 03:20:28,722 | INFO     | sum of square deviations: 6103315475657.212
[2025-11-25 22:21:27] 2025-11-26 03:20:28,913 | INFO     | sum of deviations: 21492781092901.344
[2025-11-25 22:21:27] 2025-11-26 03:20:28,914 | INFO     | mean x: 1764044201.5537038
[2025-11-25 22:21:27] 2025-11-26 03:20:28,914 | INFO     | mean y: 3156642.6218518517
[2025-11-25 22:21:27] 2025-11-26 03:20:28,914 | INFO     | intersect: -6208912193.310809
[2025-11-25 22:21:27] 2025-11-26 03:20:28,918 | INFO     | chi2: 2.2303311531770187
[2025-11-25 22:21:27] 2025-11-26 03:20:28,918 | INFO     | current memory leak: 3.52 B/s (using 2700 data points, chi2=2.23)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,920 | INFO     | could have reported an average CPU frequency of 2893 MHz (94 samples)
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | ..............................
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . Timing measurements:
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . get job = 0 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . initial setup = 4 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . payload setup = 15 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . stage-in = 0 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,921 | INFO     | . payload execution = 166555 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,922 | INFO     | . stage-out = 5 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,922 | INFO     | . log creation = 1 s
[2025-11-25 22:21:27] 2025-11-26 03:20:28,922 | INFO     | ..............................
[2025-11-25 22:21:27] 2025-11-26 03:20:29,543 | INFO     | 
[2025-11-25 22:21:27] 2025-11-26 03:20:29,543 | INFO     | job summary report
[2025-11-25 22:21:27] 2025-11-26 03:20:29,543 | INFO     | --------------------------------------------------
[2025-11-25 22:21:27] 2025-11-26 03:20:29,543 | INFO     | PanDA job id: 6895350650
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | task id: 47556137
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | errors: (none)
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | pilot state: finished 
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | transexitcode: 0
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | exeerrorcode: 0
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | exeerrordiag: 
[2025-11-25 22:21:27] 2025-11-26 03:20:29,544 | INFO     | exitcode: 0
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | exitmsg: OK
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | cpuconsumptiontime: 518226 s
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | nevents: 1000
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | neventsw: 0
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | pid: 1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:29,545 | INFO     | pgrp: 1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | corecount: 9
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | event service: False
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | sizes: {0: 2297928, 1: 2298613, 2: 2298812, 3: 2298812, 13: 2299102, 14: 2299158, 166575: 2403452, 166576: 2403451, 166582: 2413297, 166584: 2413381, 166596: 24136
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | --------------------------------------------------
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | 
[2025-11-25 22:21:27] 2025-11-26 03:20:29,546 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 22:21:27] 2025-11-26 03:20:29,597 | INFO     | time since job start (166623s) is within the limit (172800.0s)
[2025-11-25 22:21:27] 2025-11-26 03:20:29,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:21:27] 2025-11-26 03:20:29,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:21:27] 2025-11-26 03:20:29,648 | INFO     | job 6895350650 has completed (purged errors)
[2025-11-25 22:21:27] 2025-11-26 03:20:29,648 | INFO     | overall cleanup function is called
[2025-11-25 22:21:27] 2025-11-26 03:20:30,672 | INFO     | --- collectZombieJob: --- 10, [1832058]
[2025-11-25 22:21:27] 2025-11-26 03:20:30,672 | INFO     | zombie collector waiting for pid 1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:30,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:21:27] 2025-11-26 03:20:30,672 | INFO     | collected zombie processes
[2025-11-25 22:21:27] 2025-11-26 03:20:30,673 | INFO     | will attempt to kill all subprocesses of pid=1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:31,749 | INFO     | process IDs to be killed: [1832058] (in reverse order)
[2025-11-25 22:21:27] 2025-11-26 03:20:31,959 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:21:27] 2025-11-26 03:20:31,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:21:27] 2025-11-26 03:20:31,987 | INFO     | did not find any defunct processes belonging to 1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:32,015 | INFO     | did not find any defunct processes belonging to 1832058
[2025-11-25 22:21:27] 2025-11-26 03:20:32,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:21:27] 2025-11-26 03:20:32,018 | INFO     | ready for new job
[2025-11-25 22:21:27] 2025-11-26 03:20:32,018 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:21:27] 2025-11-26 03:20:32,030 | INFO     | ***************************************
[2025-11-25 22:21:27] 2025-11-26 03:20:32,030 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:21:27] 2025-11-26 03:20:32,030 | INFO     | ***************************************
[2025-11-25 22:21:27] 2025-11-26 03:20:32,030 | INFO     | 
[2025-11-25 22:21:27] 2025-11-26 03:20:32,033 | INFO     | architecture information:
[2025-11-25 22:21:27] 2025-11-26 03:20:32,033 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:21:27] 2025-11-26 03:20:32,052 | INFO     | cat /etc/os-release:
[2025-11-25 22:21:27] NAME="CentOS Linux"
[2025-11-25 22:21:27] VERSION="7 (Core)"
[2025-11-25 22:21:27] ID="centos"
[2025-11-25 22:21:27] ID_LIKE="rhel fedora"
[2025-11-25 22:21:27] VERSION_ID="7"
[2025-11-25 22:21:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:21:27] ANSI_COLOR="0;31"
[2025-11-25 22:21:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:21:27] HOME_URL="https://www.centos.org/"
[2025-11-25 22:21:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:21:27] 
[2025-11-25 22:21:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:21:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:21:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:21:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:21:27] 
[2025-11-25 22:21:27] 2025-11-26 03:20:32,053 | INFO     | ***************************************
[2025-11-25 22:21:27] 2025-11-26 03:20:32,565 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 22:21:27] 2025-11-26 03:20:32,710 | INFO     | sufficient remaining disk space (48403316736 B)
[2025-11-25 22:21:27] 2025-11-26 03:20:32,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:21:27] 2025-11-26 03:20:32,711 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:21:27] 2025-11-26 03:20:32,711 | INFO     | update_server=False
[2025-11-25 22:21:27] 2025-11-26 03:20:32,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:21:27] 2025-11-26 03:20:32,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:21:27] 2025-11-26 03:20:33,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:21:27] 2025-11-26 03:20:33,097 | INFO     | all payload control threads have been joined
[2025-11-25 22:21:27] 2025-11-26 03:20:33,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:21:27] 2025-11-26 03:20:33,127 | INFO     | aborting loop
[2025-11-25 22:21:27] 2025-11-26 03:20:33,255 | INFO     | all data control threads have been joined
[2025-11-25 22:21:27] 2025-11-26 03:20:33,718 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:33,933 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:33,991 | INFO     | all job control threads have been joined
[2025-11-25 22:21:27] 2025-11-26 03:20:34,052 | INFO     | [job] validate thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,060 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,107 | INFO     | [payload] control thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,133 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:21:27] 2025-11-26 03:20:34,268 | INFO     | [data] control thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,523 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,631 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,693 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:34,999 | INFO     | [job] control thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:35,075 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:35,098 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:35,140 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:20:36,726 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:21:27] 2025-11-26 03:21:03,996 | INFO     | PID=1816520 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:21:27] 2025-11-26 03:21:03,996 | INFO     | .. there are 42 such processes running
[2025-11-25 22:21:27] 2025-11-26 03:21:03,996 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:21:27] 2025-11-26 03:21:03,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:21:27] 2025-11-26 03:21:03,996 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:21:27] 2025-11-26 03:21:21,279 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:21:27] 2025-11-26 03:21:21,845 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139719973189440)>', '<ExcThread(monitor, started 139719488816896)>']
[2025-11-25 22:21:27] 2025-11-26 03:21:22,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:21:27] 2025-11-26 03:21:22,120 | INFO     | [monitor] control thread has ended
[2025-11-25 22:21:27] 2025-11-26 03:21:26,871 | INFO     | all workflow threads have been joined
[2025-11-25 22:21:27] 2025-11-26 03:21:26,871 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:21:27] 2025-11-26 03:21:26,871 | INFO     | traces error code: 0
[2025-11-25 22:21:27] 2025-11-26 03:21:26,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:21:27] 2025-11-26 03:21:27,151 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:21:27] 2025-11-26 03:21:27,154 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:21:27] 2025-11-26 03:21:27,157 [wrapper] pilotpid: 1816520
[2025-11-25 22:21:27] 2025-11-26 03:21:27,160 [wrapper] Pilot exit status: 0
[2025-11-25 22:21:27] 2025-11-26 03:21:27,174 [wrapper] pandaids: 6895350650
[2025-11-25 22:21:27] 2025-11-26 03:21:27,286 [wrapper] cleanup supervisor_pilot 1397166 1816521
[2025-11-25 22:21:27] 2025-11-26 03:21:27,289 [wrapper] Test setup, not cleaning
[2025-11-25 22:21:27] 2025-11-26 03:21:27,293 [wrapper] apfmon messages muted
[2025-11-25 22:21:27] 2025-11-26 03:21:27,297 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:21:27] 2025-11-26 03:21:27,301 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:21:27]  *** Error codes and diagnostics ***
[2025-11-25 22:21:27]     "exeErrorCode": 0,
[2025-11-25 22:21:27]     "exeErrorDiag": "",
[2025-11-25 22:21:27]     "pilotErrorCode": 0,
[2025-11-25 22:21:27]     "pilotErrorDiag": "",
[2025-11-25 22:21:27]  *** Listing of results directory ***
[2025-11-25 22:21:27] total 1358292
[2025-11-25 22:21:27] -rwx------. 1 boincer umatlas     36292 Nov 22 16:52 runpilot2-wrapper.sh
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 16:52 queuedata.json
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 16:52 pilot3.tar.gz
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:21:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:02 run_atlas
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:02 job.xml
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas 409851041 Nov 24 00:02 EVNT.47483658._000520.pool.root.1
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-25 22:21:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:02 shared
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 00:02 input.tar.gz
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:02 boinc_lockfile
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:02 pandaJob.out
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas        57 Nov 24 00:02 setup.sh.local
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas    989786 Nov 24 00:03 agis_schedconf.cvmfs.json
[2025-11-25 22:21:27] drwx------. 5 boincer umatlas      4096 Nov 24 00:03 pilot3
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas       533 Nov 25 22:03 boinc_task_state.xml
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas      6525 Nov 25 22:13 init_data.xml
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas 927276761 Nov 25 22:19 HITS.47556137._005155.pool.root.1
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas      1055 Nov 25 22:20 memory_monitor_summary.json
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas   1516240 Nov 25 22:20 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas   3547121 Nov 25 22:20 log.47556137._005155.job.log.tgz.1
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas        95 Nov 25 22:20 pilot_heartbeat.json
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas      8610 Nov 25 22:20 heartbeat.json
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 22:21 boinc_mmap_file
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas        29 Nov 25 22:21 wrapper_checkpoint.txt
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas      4824 Nov 25 22:21 pilotlog.txt
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas  21376090 Nov 25 22:21 log.47556137._005155.job.log.1
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas       353 Nov 25 22:21 output.list
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas       620 Nov 25 22:21 runtime_log
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas  24944640 Nov 25 22:21 result.tar.gz
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas      9339 Nov 25 22:21 runtime_log.err
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas       665 Nov 25 22:21 NjvMDm7hAh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsJIKDmAYZIOo.diag
[2025-11-25 22:21:27] -rw-r--r--. 1 boincer umatlas     21371 Nov 25 22:21 stderr.txt
[2025-11-25 22:21:27] HITS file was successfully produced:
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas 927276761 Nov 25 22:19 shared/HITS.pool.root.1
[2025-11-25 22:21:27]  *** Contents of shared directory: ***
[2025-11-25 22:21:27] total 1330756
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas 409851041 Nov 24 00:02 ATLAS.root_0
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:02 start_atlas.sh
[2025-11-25 22:21:27] -rw-r--r--. 2 boincer umatlas    590095 Nov 24 00:02 input.tar.gz
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas 927276761 Nov 25 22:19 HITS.pool.root.1
[2025-11-25 22:21:27] -rw-------. 1 boincer umatlas  24944640 Nov 25 22:21 result.tar.gz
22:21:29 (1808195): run_atlas exited; CPU time 527021.210857
22:21:29 (1808195): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN