Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:12 (1546942): wrapper (7.7.26015): starting
00:01:12 (1546942): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:01:12] Arguments: --nthreads 9
[2025-11-24 00:01:12] Threads: 9
[2025-11-24 00:01:12] Checking for CVMFS
[2025-11-24 00:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:01:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:01:15] 2.13.2.0 6122 31792 369248 153233 3 112 37835235 40960000 16243 16776704 0 63881422 99.590 70904328 40126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:01:15] CVMFS is ok
[2025-11-24 00:01:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:01:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:01:15] Further information can be found at the LHC@home message board.
[2025-11-24 00:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:01:15] Checking for apptainer binary...
[2025-11-24 00:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:01:15] Running /usr/bin/apptainer --version
[2025-11-24 00:01:15] apptainer version 1.4.4-1.el9
[2025-11-24 00:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:01:16] c-210-35-2.aglt2.org
[2025-11-24 00:01:16] apptainer works
[2025-11-24 00:01:16] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:01:16] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:01:17] Starting ATLAS job with PandaID=6895350880
[2025-11-24 00:01:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:09 (1546942): BOINC client no longer exists - exiting
07:40:09 (1546942): timer handler: client dead, exiting
00:17:53 (151960): wrapper (7.7.26015): starting
00:17:53 (151960): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:17:53] Arguments: --nthreads 9
[2025-11-25 00:17:53] Threads: 9
[2025-11-25 00:17:53] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:17:53] Checking for CVMFS
[2025-11-25 00:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:17:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:17:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:17:56] 2.13.2.0 6122 33248 374332 153271 1 100 29052877 40960000 16460 16776704 0 66831431 99.594 74239690 40391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:17:56] CVMFS is ok
[2025-11-25 00:17:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:17:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:17:56] Further information can be found at the LHC@home message board.
[2025-11-25 00:17:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:17:56] Checking for apptainer binary...
[2025-11-25 00:17:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:17:56] Running /usr/bin/apptainer --version
[2025-11-25 00:17:56] apptainer version 1.4.4-1.el9
[2025-11-25 00:17:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:17:57] c-210-35-2.aglt2.org
[2025-11-25 00:17:57] apptainer works
[2025-11-25 00:17:57] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:17:57] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:17:58] Starting ATLAS job with PandaID=6895350880
[2025-11-25 00:17:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:27:26 (172067): wrapper (7.7.26015): starting
00:27:26 (172067): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:27:26] Arguments: --nthreads 9
[2025-11-25 00:27:26] Threads: 9
[2025-11-25 00:27:26] This job has been restarted, cleaning up previous attempt
[2025-11-25 00:27:26] Checking for CVMFS
[2025-11-25 00:27:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:27:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:27:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:27:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:27:27] 2.13.2.0 6122 33258 370484 153272 3 92 29074093 40960000 13235 16776704 0 66848037 99.594 74240985 40391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-25 00:27:27] CVMFS is ok
[2025-11-25 00:27:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:27:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:27:27] Further information can be found at the LHC@home message board.
[2025-11-25 00:27:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:27:27] Checking for apptainer binary...
[2025-11-25 00:27:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:27:27] Running /usr/bin/apptainer --version
[2025-11-25 00:27:27] apptainer version 1.4.4-1.el9
[2025-11-25 00:27:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:27:27] c-210-35-2.aglt2.org
[2025-11-25 00:27:27] apptainer works
[2025-11-25 00:27:27] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:27:27] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:27:27] Starting ATLAS job with PandaID=6895350880
[2025-11-25 00:27:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 00:03:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 00:03:39] 2025-11-25 21:21:56,556 | INFO     | fitting pss+swap vs Time
[2025-11-26 00:03:39] 2025-11-25 21:21:56,557 | INFO     | sum of square deviations: 255040860871.33212
[2025-11-26 00:03:39] 2025-11-25 21:21:56,584 | INFO     | sum of deviations: 1843175393144.2202
[2025-11-26 00:03:39] 2025-11-25 21:21:56,585 | INFO     | mean x: 1764077096.053362
[2025-11-26 00:03:39] 2025-11-25 21:21:56,585 | INFO     | mean y: 3039863.2155816434
[2025-11-26 00:03:39] 2025-11-25 21:21:56,585 | INFO     | intersect: -12745911359.52692
[2025-11-26 00:03:39] 2025-11-25 21:21:56,586 | INFO     | chi2: 11.680257385387442
[2025-11-26 00:03:39] 2025-11-25 21:21:56,587 | INFO     | sum of square deviations: 250979834014.4671
[2025-11-26 00:03:39] 2025-11-25 21:21:56,622 | INFO     | sum of deviations: 2169068444928.0942
[2025-11-26 00:03:39] 2025-11-25 21:21:56,623 | INFO     | mean x: 1764076943.5697424
[2025-11-26 00:03:39] 2025-11-25 21:21:56,623 | INFO     | mean y: 3052097.060085837
[2025-11-26 00:03:39] 2025-11-25 21:21:56,623 | INFO     | intersect: -15242808781.554424
[2025-11-26 00:03:39] 2025-11-25 21:21:56,625 | INFO     | chi2: 8.532519347269032
[2025-11-26 00:03:39] 2025-11-25 21:21:56,625 | INFO     | current chi2=8.532519347269032 (change=26.949218105898765 %)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,626 | INFO     | sum of square deviations: 246962156807.09747
[2025-11-26 00:03:39] 2025-11-25 21:21:56,663 | INFO     | sum of deviations: 2526913606959.3677
[2025-11-26 00:03:39] 2025-11-25 21:21:56,663 | INFO     | mean x: 1764076791.0863
[2025-11-26 00:03:39] 2025-11-25 21:21:56,663 | INFO     | mean y: 3065678.5329018338
[2025-11-26 00:03:39] 2025-11-25 21:21:56,663 | INFO     | intersect: -18046945322.13665
[2025-11-26 00:03:39] 2025-11-25 21:21:56,664 | INFO     | chi2: 4.930275699204245
[2025-11-26 00:03:39] 2025-11-25 21:21:56,665 | INFO     | current chi2=4.930275699204245 (change=42.2178198660369 %)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,669 | INFO     | sum of square deviations: 242987596686.71103
[2025-11-26 00:03:39] 2025-11-25 21:21:56,702 | INFO     | sum of deviations: 2676127005683.7466
[2025-11-26 00:03:39] 2025-11-25 21:21:56,702 | INFO     | mean x: 1764076638.6030369
[2025-11-26 00:03:39] 2025-11-25 21:21:56,702 | INFO     | mean y: 3071399.376355748
[2025-11-26 00:03:39] 2025-11-25 21:21:56,702 | INFO     | intersect: -19425464036.315617
[2025-11-26 00:03:39] 2025-11-25 21:21:56,703 | INFO     | chi2: 4.104139037858616
[2025-11-26 00:03:39] 2025-11-25 21:21:56,704 | INFO     | current chi2=4.104139037858616 (change=16.756398865868068 %)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,704 | INFO     | right removable region: 921
[2025-11-26 00:03:39] 2025-11-25 21:21:56,705 | INFO     | sum of square deviations: 250978088804.46683
[2025-11-26 00:03:39] 2025-11-25 21:21:56,742 | INFO     | sum of deviations: 1505576738808.9224
[2025-11-26 00:03:39] 2025-11-25 21:21:56,743 | INFO     | mean x: 1764077248.5697424
[2025-11-26 00:03:39] 2025-11-25 21:21:56,743 | INFO     | mean y: 3052530.5858369097
[2025-11-26 00:03:39] 2025-11-25 21:21:56,743 | INFO     | intersect: -10579359996.182037
[2025-11-26 00:03:39] 2025-11-25 21:21:56,748 | INFO     | chi2: 8.731088672736078
[2025-11-26 00:03:39] 2025-11-25 21:21:56,748 | INFO     | current chi2=8.731088672736078 (change=25.249175727419455 %)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,749 | INFO     | sum of square deviations: 246960707387.91162
[2025-11-26 00:03:39] 2025-11-25 21:21:56,788 | INFO     | sum of deviations: 1366774969619.263
[2025-11-26 00:03:39] 2025-11-25 21:21:56,788 | INFO     | mean x: 1764077401.0474648
[2025-11-26 00:03:39] 2025-11-25 21:21:56,788 | INFO     | mean y: 3057792.857605178
[2025-11-26 00:03:39] 2025-11-25 21:21:56,789 | INFO     | intersect: -9760020964.58807
[2025-11-26 00:03:39] 2025-11-25 21:21:56,789 | INFO     | chi2: 8.27464337112154
[2025-11-26 00:03:39] 2025-11-25 21:21:56,790 | INFO     | current chi2=8.27464337112154 (change=5.227816584200387 %)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,790 | INFO     | left removable region: 20
[2025-11-26 00:03:39] 2025-11-25 21:21:56,791 | INFO     | sum of square deviations: 226762747283.716
[2025-11-26 00:03:39] 2025-11-25 21:21:56,821 | INFO     | sum of deviations: 2036988653011.776
[2025-11-26 00:03:39] 2025-11-25 21:21:56,821 | INFO     | mean x: 1764077217.9822419
[2025-11-26 00:03:39] 2025-11-25 21:21:56,821 | INFO     | mean y: 3098015.4861265263
[2025-11-26 00:03:39] 2025-11-25 21:21:56,821 | INFO     | intersect: -15843443442.977024
[2025-11-26 00:03:39] 2025-11-25 21:21:56,822 | INFO     | chi2: 0.3427538989126242
[2025-11-26 00:03:39] 2025-11-25 21:21:56,822 | INFO     | current memory leak: 8.98 B/s (using 901 data points, chi2=0.34)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,823 | INFO     | could have reported an average CPU frequency of 2864 MHz (35 samples)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,823 | INFO     | ..............................
[2025-11-26 00:03:39] 2025-11-25 21:21:56,823 | INFO     | . Timing measurements:
[2025-11-26 00:03:39] 2025-11-25 21:21:56,823 | INFO     | . get job = 0 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . initial setup = 2 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . payload setup = 19 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . stage-in = 0 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . payload execution = 57153 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . stage-out = 11 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | . log creation = 2 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,824 | INFO     | ..............................
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | 
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | job summary report
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | --------------------------------------------------
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | PanDA job id: 6895350880
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | task id: 47556149
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | errors: (none)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | pilot state: finished 
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | transexitcode: 0
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | exeerrorcode: 0
[2025-11-26 00:03:39] 2025-11-25 21:21:56,965 | INFO     | exeerrordiag: 
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | exitcode: 0
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | exitmsg: OK
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | cpuconsumptiontime: 244830 s
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | nevents: 1000
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | neventsw: 0
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | pid: 233345
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | pgrp: 233345
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | corecount: 9
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | event service: False
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 13: 2284577, 23: 2284633, 57176: 2335027, 57188: 2344026, 57191: 2344082, 57210: 2344328}
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | --------------------------------------------------
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | 
[2025-11-26 00:03:39] 2025-11-25 21:21:56,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-26 00:03:39] 2025-11-25 21:21:56,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 00:03:39] 2025-11-25 21:21:56,990 | INFO     | job 6895350880 has completed (purged errors)
[2025-11-26 00:03:39] 2025-11-25 21:21:56,990 | INFO     | overall cleanup function is called
[2025-11-26 00:03:39] 2025-11-25 21:21:58,020 | INFO     | --- collectZombieJob: --- 10, [233345]
[2025-11-26 00:03:39] 2025-11-25 21:21:58,020 | INFO     | zombie collector waiting for pid 233345
[2025-11-26 00:03:39] 2025-11-25 21:21:58,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 00:03:39] 2025-11-25 21:21:58,020 | INFO     | collected zombie processes
[2025-11-26 00:03:39] 2025-11-25 21:21:58,020 | INFO     | will attempt to kill all subprocesses of pid=233345
[2025-11-26 00:03:39] 2025-11-25 21:21:58,938 | INFO     | process IDs to be killed: [233345] (in reverse order)
[2025-11-26 00:03:39] 2025-11-25 21:21:59,059 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 00:03:39] 2025-11-25 21:21:59,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 00:03:39] 2025-11-25 21:21:59,068 | INFO     | did not find any defunct processes belonging to 233345
[2025-11-26 00:03:39] 2025-11-25 21:21:59,079 | INFO     | did not find any defunct processes belonging to 233345
[2025-11-26 00:03:39] 2025-11-25 21:21:59,080 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 00:03:39] 2025-11-25 21:21:59,080 | INFO     | ready for new job
[2025-11-26 00:03:39] 2025-11-25 21:21:59,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 00:03:39] 2025-11-25 21:21:59,102 | INFO     | ***************************************
[2025-11-26 00:03:39] 2025-11-25 21:21:59,103 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 00:03:39] 2025-11-25 21:21:59,103 | INFO     | ***************************************
[2025-11-26 00:03:39] 2025-11-25 21:21:59,103 | INFO     | 
[2025-11-26 00:03:39] 2025-11-25 21:21:59,118 | INFO     | architecture information:
[2025-11-26 00:03:39] 2025-11-25 21:21:59,123 | INFO     | executing command: cat /etc/os-release
[2025-11-26 00:03:39] 2025-11-25 21:21:59,140 | INFO     | cat /etc/os-release:
[2025-11-26 00:03:39] NAME="CentOS Linux"
[2025-11-26 00:03:39] VERSION="7 (Core)"
[2025-11-26 00:03:39] ID="centos"
[2025-11-26 00:03:39] ID_LIKE="rhel fedora"
[2025-11-26 00:03:39] VERSION_ID="7"
[2025-11-26 00:03:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 00:03:39] ANSI_COLOR="0;31"
[2025-11-26 00:03:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 00:03:39] HOME_URL="https://www.centos.org/"
[2025-11-26 00:03:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 00:03:39] 
[2025-11-26 00:03:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 00:03:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 00:03:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 00:03:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 00:03:39] 
[2025-11-26 00:03:39] 2025-11-25 21:21:59,140 | INFO     | ***************************************
[2025-11-26 00:03:39] 2025-11-25 21:21:59,644 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-26 00:03:39] 2025-11-25 21:21:59,667 | INFO     | sufficient remaining disk space (69769101312 B)
[2025-11-26 00:03:39] 2025-11-25 21:21:59,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 00:03:39] 2025-11-25 21:21:59,667 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 00:03:39] 2025-11-25 21:21:59,667 | INFO     | update_server=False
[2025-11-26 00:03:39] 2025-11-25 21:21:59,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 00:03:39] 2025-11-25 21:21:59,823 | INFO     | all data control threads have been joined
[2025-11-26 00:03:39] 2025-11-25 21:22:00,042 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 00:03:39] 2025-11-25 21:22:00,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 00:03:39] 2025-11-25 21:22:00,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:03:39] 2025-11-25 21:22:00,042 | INFO     | will abort loop
[2025-11-26 00:03:39] 2025-11-25 21:22:00,110 | INFO     | all job control threads have been joined
[2025-11-26 00:03:39] 2025-11-25 21:22:00,674 | INFO     | [job] retrieve thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:00,757 | INFO     | all payload control threads have been joined
[2025-11-26 00:03:39] 2025-11-25 21:22:00,829 | INFO     | [data] control thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,048 | INFO     | [job] job monitor thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 00:03:39] 2025-11-25 21:22:01,136 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,140 | INFO     | [job] control thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,643 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,763 | INFO     | [payload] control thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:01,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 00:03:39] 2025-11-25 21:22:02,063 | INFO     | [payload] validate_post thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,063 | INFO     | [payload] failed_post thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,079 | INFO     | [data] copytool_in thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,079 | INFO     | [job] validate thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,136 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:02,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 00:03:39] 2025-11-25 21:22:02,988 | INFO     | [job] queue monitor thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:03,139 | INFO     | [data] copytool_out thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:06,330 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 00:03:39] 2025-11-25 21:22:31,311 | INFO     | PID=190642 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 00:03:39] 2025-11-25 21:22:31,312 | INFO     | .. there are 19 such processes running
[2025-11-26 00:03:39] 2025-11-25 21:22:31,312 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 00:03:39] 2025-11-25 21:22:31,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 00:03:39] 2025-11-25 21:22:31,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 00:03:39] 2025-11-25 21:22:40,013 | INFO     | [monitor] cgroup control has ended
[2025-11-26 00:03:39] 2025-11-25 21:22:40,035 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768791476032)>', '<ExcThread(monitor, started 139768513922816)>']
[2025-11-26 00:03:39] 2025-11-25 21:22:40,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 00:03:39] 2025-11-25 21:22:40,367 | INFO     | [monitor] control thread has ended
[2025-11-26 00:03:39] 2025-11-25 21:22:45,060 | INFO     | all workflow threads have been joined
[2025-11-26 00:03:39] 2025-11-25 21:22:45,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 00:03:39] 2025-11-25 21:22:45,060 | INFO     | traces error code: 0
[2025-11-26 00:03:39] 2025-11-25 21:22:45,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 00:03:39] 2025-11-25 21:22:45,272 [wrapper] ==== pilot stdout END ====
[2025-11-26 00:03:39] 2025-11-25 21:22:45,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 00:03:39] 2025-11-25 21:22:45,278 [wrapper] pilotpid: 190642
[2025-11-26 00:03:39] 2025-11-25 21:22:45,281 [wrapper] Pilot exit status: 0
[2025-11-26 00:03:39] 2025-11-25 21:22:45,311 [wrapper] pandaids: 6895350880 6895350880 6895350880
[2025-11-26 00:03:39] 2025-11-25 21:22:45,389 [wrapper] cleanup supervisor_pilot 2334338 190643
[2025-11-26 00:03:39] 2025-11-25 21:22:45,392 [wrapper] Test setup, not cleaning
[2025-11-26 00:03:39] 2025-11-25 21:22:45,395 [wrapper] apfmon messages muted
[2025-11-26 00:03:39] 2025-11-25 21:22:45,397 [wrapper] ==== wrapper stdout END ====
[2025-11-26 00:03:39] 2025-11-25 21:22:45,399 [wrapper] ==== wrapper stderr END ====
[2025-11-26 00:03:39]  *** Error codes and diagnostics ***
[2025-11-26 00:03:39]     "exeErrorCode": 0,
[2025-11-26 00:03:39]     "exeErrorDiag": "",
[2025-11-26 00:03:39]     "pilotErrorCode": 0,
[2025-11-26 00:03:39]     "pilotErrorDiag": "",
[2025-11-26 00:03:39]  *** Listing of results directory ***
[2025-11-26 00:03:39] total 1727856
[2025-11-26 00:03:39] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 17:07 pilot3.tar.gz
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 17:29 queuedata.json
[2025-11-26 00:03:39] -rwx------. 1 boincer umatlas     36292 Nov 22 17:29 runpilot2-wrapper.sh
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 00:03:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:01 run_atlas
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:01 job.xml
[2025-11-26 00:03:39] -rw-r--r--. 3 boincer umatlas 410824066 Nov 24 00:01 EVNT.47483658._001120.pool.root.1
[2025-11-26 00:03:39] -rw-r--r--. 3 boincer umatlas 410824066 Nov 24 00:01 ATLAS.root_0
[2025-11-26 00:03:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-26 00:03:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:01 shared
[2025-11-26 00:03:39] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 00:01 input.tar.gz
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:01 boinc_lockfile
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas         0 Nov 25 00:19 wrapper_sigint_158062
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:27 pandaJob.out
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas        57 Nov 25 00:27 setup.sh.local
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas    991801 Nov 25 00:27 agis_schedconf.cvmfs.json
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas       531 Nov 25 16:03 boinc_task_state.xml
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas 924925129 Nov 25 16:20 HITS.47556149._001066.pool.root.1
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas      1068 Nov 25 16:21 memory_monitor_summary.json
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas   1516240 Nov 25 16:21 agis_ddmendpoints.agis.ALL.json
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas   2205181 Nov 25 16:21 log.47556149._001066.job.log.tgz.1
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas      7959 Nov 25 16:21 heartbeat.json
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas        98 Nov 25 16:22 pilot_heartbeat.json
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas      5009 Nov 25 16:22 pilotlog.txt
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas   7207048 Nov 25 16:22 log.47556149._001066.job.log.1
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas       353 Nov 25 16:22 output.list
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas       620 Nov 25 16:22 runtime_log
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas   9431040 Nov 25 16:22 result.tar.gz
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas       915 Nov 25 16:22 wH1NDmHIBh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4QKKDmo2Ys3n.diag
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas      9438 Nov 25 16:22 runtime_log.err
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 00:03 init_data.xml
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas        28 Nov 26 00:03 wrapper_checkpoint.txt
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 00:03 boinc_mmap_file
[2025-11-26 00:03:39] -rw-r--r--. 1 boincer umatlas     25599 Nov 26 00:03 stderr.txt
[2025-11-26 00:03:39] HITS file was successfully produced:
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas 924925129 Nov 25 16:20 shared/HITS.pool.root.1
[2025-11-26 00:03:39]  *** Contents of shared directory: ***
[2025-11-26 00:03:39] total 1314260
[2025-11-26 00:03:39] -rw-r--r--. 3 boincer umatlas 410824066 Nov 24 00:01 ATLAS.root_0
[2025-11-26 00:03:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-26 00:03:39] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 00:01 input.tar.gz
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas 924925129 Nov 25 16:20 HITS.pool.root.1
[2025-11-26 00:03:39] -rw-------. 1 boincer umatlas   9431040 Nov 25 16:22 result.tar.gz
00:03:41 (172067): run_atlas exited; CPU time 245564.316329
00:03:41 (172067): called boinc_finish(0)

</stderr_txt>
]]>

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