Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:36:20 (2637204): wrapper (7.7.26015): starting
10:36:20 (2637204): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 10:36:20] Arguments: --nthreads 9
[2025-11-24 10:36:20] Threads: 9
[2025-11-24 10:36:20] Checking for CVMFS
[2025-11-24 10:36:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:36:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:36:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:36:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:36:22] 2.13.3.0 11541 27357 377036 153250 1 548 21155670 32935936 21176 16776704 0 57873281 99.312 102975591 40449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 10:36:22] CVMFS is ok
[2025-11-24 10:36:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:36:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:36:22] Further information can be found at the LHC@home message board.
[2025-11-24 10:36:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:36:22] Checking for apptainer binary...
[2025-11-24 10:36:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:36:22] Running /usr/bin/apptainer --version
[2025-11-24 10:36:22] apptainer version 1.4.4-1.el9
[2025-11-24 10:36:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:36:23] c6-1-26-1.aglt2.org
[2025-11-24 10:36:23] apptainer works
[2025-11-24 10:36:23] Set ATHENA_PROC_NUMBER=9
[2025-11-24 10:36:23] Set ATHENA_CORE_NUMBER=9
[2025-11-24 10:36:23] Starting ATLAS job with PandaID=6895355805
[2025-11-24 10:36:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:51:59]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:51:59] 2025-11-25 10:51:04,203 | INFO     | monitor loop #4311: job 0:6895355805 is in state 'finished'
[2025-11-25 05:51:59] 2025-11-25 10:51:04,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:51:59] 2025-11-25 10:51:05,240 | INFO     | time since job start (69257s) is within the limit (172800.0s)
[2025-11-25 05:51:59] 2025-11-25 10:51:06,708 | INFO     | monitor loop #4312: job 0:6895355805 is in state 'finished'
[2025-11-25 05:51:59] 2025-11-25 10:51:06,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:51:59] 2025-11-25 10:51:07,249 | INFO     | time since job start (69259s) is within the limit (172800.0s)
[2025-11-25 05:51:59] 2025-11-25 10:51:08,632 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 05:51:59] 2025-11-25 10:51:08,674 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2744.121428571429
[2025-11-25 05:51:59] 2025-11-25 10:51:08,900 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895355805/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 05:51:59] 2025-11-25 10:51:08,936 | INFO     | extracted standard info from prmon json
[2025-11-25 05:51:59] 2025-11-25 10:51:08,937 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:51:59] 2025-11-25 10:51:08,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:51:59] 2025-11-25 10:51:09,172 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:51:59] 2025-11-25 10:51:09,208 | INFO     | sum of square deviations: 452214652175.6895
[2025-11-25 05:51:59] 2025-11-25 10:51:09,217 | INFO     | monitor loop #4313: job 0:6895355805 is in state 'finished'
[2025-11-25 05:51:59] 2025-11-25 10:51:09,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 05:51:59] 2025-11-25 10:51:09,325 | INFO     | time since job start (69261s) is within the limit (172800.0s)
[2025-11-25 05:51:59] 2025-11-25 10:51:09,333 | INFO     | sum of deviations: 1728031246126.363
[2025-11-25 05:51:59] 2025-11-25 10:51:09,334 | INFO     | mean x: 1764033235.2627866
[2025-11-25 05:51:59] 2025-11-25 10:51:09,334 | INFO     | mean y: 3055425.233686067
[2025-11-25 05:51:59] 2025-11-25 10:51:09,334 | INFO     | intersect: -6737780005.625327
[2025-11-25 05:51:59] 2025-11-25 10:51:09,336 | INFO     | chi2: 16.93131509846327
[2025-11-25 05:51:59] 2025-11-25 10:51:09,337 | INFO     | sum of square deviations: 446260640234.85547
[2025-11-25 05:51:59] 2025-11-25 10:51:09,389 | INFO     | sum of deviations: 2214574252015.2944
[2025-11-25 05:51:59] 2025-11-25 10:51:09,390 | INFO     | mean x: 1764033082.775022
[2025-11-25 05:51:59] 2025-11-25 10:51:09,390 | INFO     | mean y: 3067886.1310894596
[2025-11-25 05:51:59] 2025-11-25 10:51:09,390 | INFO     | intersect: -8750969312.311495
[2025-11-25 05:51:59] 2025-11-25 10:51:09,396 | INFO     | chi2: 12.30138622549897
[2025-11-25 05:51:59] 2025-11-25 10:51:09,396 | INFO     | current chi2=12.30138622549897 (change=27.345358857473062 %)
[2025-11-25 05:51:59] 2025-11-25 10:51:09,397 | INFO     | sum of square deviations: 440359140906.1806
[2025-11-25 05:51:59] 2025-11-25 10:51:09,601 | INFO     | sum of deviations: 2601840463957.5225
[2025-11-25 05:51:59] 2025-11-25 10:51:09,601 | INFO     | mean x: 1764032930.2873666
[2025-11-25 05:51:59] 2025-11-25 10:51:09,602 | INFO     | mean y: 3077894.0293594305
[2025-11-25 05:51:59] 2025-11-25 10:51:09,602 | INFO     | intersect: -10419624467.344084
[2025-11-25 05:51:59] 2025-11-25 10:51:09,641 | INFO     | chi2: 9.289761060063409
[2025-11-25 05:51:59] 2025-11-25 10:51:09,641 | INFO     | current chi2=9.289761060063409 (change=24.481998290508947 %)
[2025-11-25 05:51:59] 2025-11-25 10:51:09,641 | INFO     | right removable region: 1123
[2025-11-25 05:51:59] 2025-11-25 10:51:09,680 | INFO     | sum of square deviations: 446258729104.855
[2025-11-25 05:51:59] 2025-11-25 10:51:09,907 | INFO     | sum of deviations: 1344450331431.5613
[2025-11-25 05:51:59] 2025-11-25 10:51:09,908 | INFO     | mean x: 1764033387.775022
[2025-11-25 05:51:59] 2025-11-25 10:51:09,908 | INFO     | mean y: 3065241.5376439327
[2025-11-25 05:51:59] 2025-11-25 10:51:09,908 | INFO     | intersect: -5311464465.495186
[2025-11-25 05:51:59] 2025-11-25 10:51:09,914 | INFO     | chi2: 14.330675224282752
[2025-11-25 05:51:59] 2025-11-25 10:51:09,914 | INFO     | current chi2=14.330675224282752 (change=15.359940199899524 %)
[2025-11-25 05:51:59] 2025-11-25 10:51:09,914 | INFO     | left removable region: 10
[2025-11-25 05:51:59] 2025-11-25 10:51:09,915 | INFO     | sum of square deviations: 427556059338.9996
[2025-11-25 05:51:59] 2025-11-25 10:51:09,950 | INFO     | sum of deviations: 2220735499820.485
[2025-11-25 05:51:59] 2025-11-25 10:51:09,951 | INFO     | mean x: 1764033204.8104222
[2025-11-25 05:51:59] 2025-11-25 10:51:09,951 | INFO     | mean y: 3092417.7511230907
[2025-11-25 05:51:59] 2025-11-25 10:51:09,951 | INFO     | intersect: -9159334532.391912
[2025-11-25 05:51:59] 2025-11-25 10:51:09,952 | INFO     | chi2: 5.844124851487883
[2025-11-25 05:51:59] 2025-11-25 10:51:09,952 | INFO     | current memory leak: 5.19 B/s (using 1113 data points, chi2=5.84)
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | could have reported an average CPU frequency of 2841 MHz (41 samples)
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | ..............................
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | . Timing measurements:
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | . get job = 0 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | . initial setup = 3 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | . payload setup = 20 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,053 | INFO     | . stage-in = 0 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,054 | INFO     | . payload execution = 69146 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,054 | INFO     | . stage-out = 17 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,054 | INFO     | . log creation = 7 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,054 | INFO     | ..............................
[2025-11-25 05:51:59] 2025-11-25 10:51:10,274 | INFO     | 
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | job summary report
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | --------------------------------------------------
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | PanDA job id: 6895355805
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | task id: 47556137
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | errors: (none)
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | pilot state: finished 
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | transexitcode: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | exeerrorcode: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | exeerrordiag: 
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | exitcode: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:10,280 | INFO     | exitmsg: OK
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | cpuconsumptiontime: 251553 s
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | nevents: 1000
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | neventsw: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | pid: 2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | pgrp: 2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | corecount: 9
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | event service: False
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | sizes: {0: 2284139, 1: 2284338, 12: 2284600, 23: 2284628, 69172: 2342558, 69190: 2351557, 69193: 2351741, 69226: 2352083}
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | --------------------------------------------------
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | 
[2025-11-25 05:51:59] 2025-11-25 10:51:10,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:51:59] 2025-11-25 10:51:10,380 | INFO     | job 6895355805 has completed (purged errors)
[2025-11-25 05:51:59] 2025-11-25 10:51:10,381 | INFO     | overall cleanup function is called
[2025-11-25 05:51:59] 2025-11-25 10:51:11,431 | INFO     | --- collectZombieJob: --- 10, [2650222]
[2025-11-25 05:51:59] 2025-11-25 10:51:11,431 | INFO     | zombie collector waiting for pid 2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:11,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:51:59] 2025-11-25 10:51:11,432 | INFO     | collected zombie processes
[2025-11-25 05:51:59] 2025-11-25 10:51:11,432 | INFO     | will attempt to kill all subprocesses of pid=2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:12,220 | INFO     | process IDs to be killed: [2650222] (in reverse order)
[2025-11-25 05:51:59] 2025-11-25 10:51:12,438 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:51:59] 2025-11-25 10:51:12,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:51:59] 2025-11-25 10:51:12,494 | INFO     | did not find any defunct processes belonging to 2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:12,514 | INFO     | did not find any defunct processes belonging to 2650222
[2025-11-25 05:51:59] 2025-11-25 10:51:12,527 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:51:59] 2025-11-25 10:51:12,527 | INFO     | ready for new job
[2025-11-25 05:51:59] 2025-11-25 10:51:12,527 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:51:59] 2025-11-25 10:51:12,577 | INFO     | ***************************************
[2025-11-25 05:51:59] 2025-11-25 10:51:12,577 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:51:59] 2025-11-25 10:51:12,577 | INFO     | ***************************************
[2025-11-25 05:51:59] 2025-11-25 10:51:12,577 | INFO     | 
[2025-11-25 05:51:59] 2025-11-25 10:51:12,661 | INFO     | architecture information:
[2025-11-25 05:51:59] 2025-11-25 10:51:12,667 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:51:59] 2025-11-25 10:51:12,711 | INFO     | cat /etc/os-release:
[2025-11-25 05:51:59] NAME="CentOS Linux"
[2025-11-25 05:51:59] VERSION="7 (Core)"
[2025-11-25 05:51:59] ID="centos"
[2025-11-25 05:51:59] ID_LIKE="rhel fedora"
[2025-11-25 05:51:59] VERSION_ID="7"
[2025-11-25 05:51:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:51:59] ANSI_COLOR="0;31"
[2025-11-25 05:51:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:51:59] HOME_URL="https://www.centos.org/"
[2025-11-25 05:51:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:51:59] 
[2025-11-25 05:51:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:51:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:51:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:51:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:51:59] 
[2025-11-25 05:51:59] 2025-11-25 10:51:12,711 | INFO     | ***************************************
[2025-11-25 05:51:59] 2025-11-25 10:51:13,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 05:51:59] 2025-11-25 10:51:13,283 | INFO     | sufficient remaining disk space (71590477824 B)
[2025-11-25 05:51:59] 2025-11-25 10:51:13,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:51:59] 2025-11-25 10:51:13,284 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:51:59] 2025-11-25 10:51:13,284 | INFO     | update_server=False
[2025-11-25 05:51:59] 2025-11-25 10:51:13,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:51:59] 2025-11-25 10:51:13,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:51:59] 2025-11-25 10:51:13,286 | INFO     | aborting loop
[2025-11-25 05:51:59] 2025-11-25 10:51:13,294 | INFO     | all job control threads have been joined
[2025-11-25 05:51:59] 2025-11-25 10:51:13,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:51:59] 2025-11-25 10:51:14,004 | INFO     | all payload control threads have been joined
[2025-11-25 05:51:59] 2025-11-25 10:51:14,073 | INFO     | all data control threads have been joined
[2025-11-25 05:51:59] 2025-11-25 10:51:14,291 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:14,300 | INFO     | [job] control thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:14,334 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:14,430 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:14,839 | INFO     | [job] validate thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:14,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,010 | INFO     | [payload] control thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:51:59] 2025-11-25 10:51:15,079 | INFO     | [data] control thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,254 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,384 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,389 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,390 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:51:59] 2025-11-25 10:51:15,590 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:15,628 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:16,402 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:19,117 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:51:59] 2025-11-25 10:51:44,037 | INFO     | PID=2641182 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 05:51:59] 2025-11-25 10:51:44,040 | INFO     | .. there are 25 such processes running
[2025-11-25 05:51:59] 2025-11-25 10:51:44,045 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:51:59] 2025-11-25 10:51:44,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:51:59] 2025-11-25 10:51:44,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:51:59] 2025-11-25 10:51:50,512 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:51:59] 2025-11-25 10:51:51,943 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228830349120)>', '<ExcThread(monitor, started 140228048180992)>']
[2025-11-25 05:51:59] 2025-11-25 10:51:52,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:51:59] 2025-11-25 10:51:52,109 | INFO     | [monitor] control thread has ended
[2025-11-25 05:51:59] 2025-11-25 10:51:53,959 [wrapper] supervise_pilot (15 min periods counter: 78)
[2025-11-25 05:51:59] 2025-11-25 10:51:56,969 | INFO     | all workflow threads have been joined
[2025-11-25 05:51:59] 2025-11-25 10:51:56,970 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:51:59] 2025-11-25 10:51:56,970 | INFO     | traces error code: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:56,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:51:59] 2025-11-25 10:51:57,620 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:51:59] 2025-11-25 10:51:57,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:51:59] 2025-11-25 10:51:57,701 [wrapper] pilotpid: 2641182
[2025-11-25 05:51:59] 2025-11-25 10:51:57,750 [wrapper] Pilot exit status: 0
[2025-11-25 05:51:59] 2025-11-25 10:51:58,132 [wrapper] pandaids: 6895355805
[2025-11-25 05:51:59] 2025-11-25 10:51:58,235 [wrapper] cleanup supervisor_pilot 1810102 2641183
[2025-11-25 05:51:59] 2025-11-25 10:51:58,239 [wrapper] Test setup, not cleaning
[2025-11-25 05:51:59] 2025-11-25 10:51:58,241 [wrapper] apfmon messages muted
[2025-11-25 05:51:59] 2025-11-25 10:51:58,244 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:51:59] 2025-11-25 10:51:58,267 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:51:59]  *** Error codes and diagnostics ***
[2025-11-25 05:51:59]     "exeErrorCode": 0,
[2025-11-25 05:51:59]     "exeErrorDiag": "",
[2025-11-25 05:51:59]     "pilotErrorCode": 0,
[2025-11-25 05:51:59]     "pilotErrorDiag": "",
[2025-11-25 05:51:59]  *** Listing of results directory ***
[2025-11-25 05:51:59] total 1332496
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 04:07 queuedata.json
[2025-11-25 05:51:59] -rwx------. 1 boincer umatlas     36292 Nov 23 04:11 runpilot2-wrapper.sh
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas       100 Nov 24 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:51:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 10:36 run_atlas
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas       105 Nov 24 10:36 job.xml
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas 409987202 Nov 24 10:36 EVNT.47483658._000677.pool.root.1
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:36 start_atlas.sh
[2025-11-25 05:51:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 10:36 shared
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 10:36 input.tar.gz
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas         0 Nov 24 10:36 boinc_lockfile
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 10:36 pandaJob.out
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas        57 Nov 24 10:36 setup.sh.local
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas    987541 Nov 24 10:36 agis_schedconf.cvmfs.json
[2025-11-25 05:51:59] drwx------. 5 boincer umatlas      4096 Nov 24 10:36 pilot3
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas       533 Nov 25 05:25 boinc_task_state.xml
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas 928040980 Nov 25 05:44 HITS.47556137._006723.pool.root.1
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas      6845 Nov 25 05:45 init_data.xml
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas      1066 Nov 25 05:50 memory_monitor_summary.json
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas   1516240 Nov 25 05:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas   2347593 Nov 25 05:50 log.47556137._006723.job.log.tgz.1
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas        95 Nov 25 05:50 pilot_heartbeat.json
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas      8636 Nov 25 05:51 heartbeat.json
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 05:51 boinc_mmap_file
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas        29 Nov 25 05:51 wrapper_checkpoint.txt
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas      4824 Nov 25 05:51 pilotlog.txt
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas   8913889 Nov 25 05:51 log.47556137._006723.job.log.1
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas       353 Nov 25 05:51 output.list
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas       620 Nov 25 05:51 runtime_log
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas  11284480 Nov 25 05:51 result.tar.gz
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas       663 Nov 25 05:51 NdDNDmsILh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPlKKDmdmXjPo.diag
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 05:51 runtime_log.err
[2025-11-25 05:51:59] -rw-r--r--. 1 boincer umatlas     21540 Nov 25 05:51 stderr.txt
[2025-11-25 05:51:59] HITS file was successfully produced:
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas 928040980 Nov 25 05:44 shared/HITS.pool.root.1
[2025-11-25 05:51:59]  *** Contents of shared directory: ***
[2025-11-25 05:51:59] total 1318296
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas 409987202 Nov 24 10:36 ATLAS.root_0
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 10:36 start_atlas.sh
[2025-11-25 05:51:59] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 10:36 input.tar.gz
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas 928040980 Nov 25 05:44 HITS.pool.root.1
[2025-11-25 05:51:59] -rw-------. 1 boincer umatlas  11284480 Nov 25 05:51 result.tar.gz
05:52:00 (2637204): run_atlas exited; CPU time 252560.635029
05:52:00 (2637204): called boinc_finish(0)

</stderr_txt>
]]>

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