Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:59:22 (3491289): wrapper (7.7.26015): starting
18:59:22 (3491289): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 18:59:22] Arguments: --nthreads 8
[2025-11-24 18:59:22] Threads: 8
[2025-11-24 18:59:22] Checking for CVMFS
[2025-11-24 18:59:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 18:59:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 18:59:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 18:59:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 18:59:22] 2.13.3.0 9230 27727 321448 153263 1 137 25255015 32503808 29529 16776704 0 203412226 99.826 87810730 34132 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 18:59:22] CVMFS is ok
[2025-11-24 18:59:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 18:59:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 18:59:22] Further information can be found at the LHC@home message board.
[2025-11-24 18:59:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 18:59:22] Checking for apptainer binary...
[2025-11-24 18:59:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 18:59:22] Running /usr/bin/apptainer --version
[2025-11-24 18:59:23] apptainer version 1.4.4-1.el9
[2025-11-24 18:59:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 18:59:23] c-4-35.aglt2.org
[2025-11-24 18:59:23] apptainer works
[2025-11-24 18:59:23] Set ATHENA_PROC_NUMBER=8
[2025-11-24 18:59:23] Set ATHENA_CORE_NUMBER=8
[2025-11-24 18:59:23] Starting ATLAS job with PandaID=6895355809
[2025-11-24 18:59:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:54:26]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:54:26] 2025-11-25 15:53:37,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:54:26] 2025-11-25 15:53:37,568 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:54:26] 2025-11-25 15:53:37,570 | INFO     | sum of square deviations: 255911012932.78897
[2025-11-25 10:54:26] 2025-11-25 15:53:37,597 | INFO     | sum of deviations: 1917063279498.6377
[2025-11-25 10:54:26] 2025-11-25 15:53:37,597 | INFO     | mean x: 1764057389.5628998
[2025-11-25 10:54:26] 2025-11-25 15:53:37,598 | INFO     | mean y: 2941344.97228145
[2025-11-25 10:54:26] 2025-11-25 15:53:37,598 | INFO     | intersect: -13211846114.55545
[2025-11-25 10:54:26] 2025-11-25 15:53:37,599 | INFO     | chi2: 8.622608362206478
[2025-11-25 10:54:26] 2025-11-25 15:53:37,600 | INFO     | sum of square deviations: 251840719759.60742
[2025-11-25 10:54:26] 2025-11-25 15:53:37,678 | INFO     | sum of deviations: 2248184281368.997
[2025-11-25 10:54:26] 2025-11-25 15:53:37,678 | INFO     | mean x: 1764057237.068596
[2025-11-25 10:54:26] 2025-11-25 15:53:37,678 | INFO     | mean y: 2953750.890675241
[2025-11-25 10:54:26] 2025-11-25 15:53:37,678 | INFO     | intersect: -15744800447.074144
[2025-11-25 10:54:26] 2025-11-25 15:53:37,679 | INFO     | chi2: 5.2024371239351535
[2025-11-25 10:54:26] 2025-11-25 15:53:37,679 | INFO     | current chi2=5.2024371239351535 (change=39.66515808907876 %)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,681 | INFO     | sum of square deviations: 247813822748.86987
[2025-11-25 10:54:26] 2025-11-25 15:53:37,710 | INFO     | sum of deviations: 2494759227625.209
[2025-11-25 10:54:26] 2025-11-25 15:53:37,711 | INFO     | mean x: 1764057084.5743535
[2025-11-25 10:54:26] 2025-11-25 15:53:37,711 | INFO     | mean y: 2963078.5549568967
[2025-11-25 10:54:26] 2025-11-25 15:53:37,711 | INFO     | intersect: -17755923980.216106
[2025-11-25 10:54:26] 2025-11-25 15:53:37,713 | INFO     | chi2: 3.0070943537249972
[2025-11-25 10:54:26] 2025-11-25 15:53:37,713 | INFO     | current chi2=3.0070943537249972 (change=42.198352770279826 %)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,714 | INFO     | sum of square deviations: 243829976490.38376
[2025-11-25 10:54:26] 2025-11-25 15:53:37,752 | INFO     | sum of deviations: 2597364599681.1743
[2025-11-25 10:54:26] 2025-11-25 15:53:37,753 | INFO     | mean x: 1764056932.0780065
[2025-11-25 10:54:26] 2025-11-25 15:53:37,753 | INFO     | mean y: 2967002.4420368364
[2025-11-25 10:54:26] 2025-11-25 15:53:37,753 | INFO     | intersect: -18788401856.92499
[2025-11-25 10:54:26] 2025-11-25 15:53:37,754 | INFO     | chi2: 2.4966573088088113
[2025-11-25 10:54:26] 2025-11-25 15:53:37,755 | INFO     | current chi2=2.4966573088088113 (change=16.974427300024324 %)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,755 | INFO     | right removable region: 922
[2025-11-25 10:54:26] 2025-11-25 15:53:37,756 | INFO     | sum of square deviations: 251840111589.60715
[2025-11-25 10:54:26] 2025-11-25 15:53:37,782 | INFO     | sum of deviations: 1647960845832.9211
[2025-11-25 10:54:26] 2025-11-25 15:53:37,782 | INFO     | mean x: 1764057542.068596
[2025-11-25 10:54:26] 2025-11-25 15:53:37,782 | INFO     | mean y: 2951412.969989282
[2025-11-25 10:54:26] 2025-11-25 15:53:37,782 | INFO     | intersect: -11540474853.702917
[2025-11-25 10:54:26] 2025-11-25 15:53:37,784 | INFO     | chi2: 6.332506273479537
[2025-11-25 10:54:26] 2025-11-25 15:53:37,784 | INFO     | current chi2=6.332506273479537 (change=26.559272931432503 %)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,785 | INFO     | sum of square deviations: 247812720115.16293
[2025-11-25 10:54:26] 2025-11-25 15:53:37,810 | INFO     | sum of deviations: 1586547290005.6714
[2025-11-25 10:54:26] 2025-11-25 15:53:37,810 | INFO     | mean x: 1764057694.5721984
[2025-11-25 10:54:26] 2025-11-25 15:53:37,810 | INFO     | mean y: 2953737.4601293104
[2025-11-25 10:54:26] 2025-11-25 15:53:37,810 | INFO     | intersect: -11290901369.882788
[2025-11-25 10:54:26] 2025-11-25 15:53:37,812 | INFO     | chi2: 6.301516080976292
[2025-11-25 10:54:26] 2025-11-25 15:53:37,812 | INFO     | current chi2=6.301516080976292 (change=0.48938273670619137 %)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,812 | INFO     | left removable region: 20
[2025-11-25 10:54:26] 2025-11-25 15:53:37,813 | INFO     | sum of square deviations: 227562578068.40588
[2025-11-25 10:54:26] 2025-11-25 15:53:37,838 | INFO     | sum of deviations: 2174241514825.493
[2025-11-25 10:54:26] 2025-11-25 15:53:37,838 | INFO     | mean x: 1764057511.5886917
[2025-11-25 10:54:26] 2025-11-25 15:53:37,839 | INFO     | mean y: 2983444.0875831484
[2025-11-25 10:54:26] 2025-11-25 15:53:37,839 | INFO     | intersect: -16851664225.982885
[2025-11-25 10:54:26] 2025-11-25 15:53:37,840 | INFO     | chi2: 0.12188145673464579
[2025-11-25 10:54:26] 2025-11-25 15:53:37,840 | INFO     | current memory leak: 9.55 B/s (using 902 data points, chi2=0.12)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,841 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | ..............................
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . Timing measurements:
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . get job = 0 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . initial setup = 2 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . payload setup = 10 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . stage-in = 0 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . payload execution = 57188 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . stage-out = 4 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | . log creation = 1 s
[2025-11-25 10:54:26] 2025-11-25 15:53:37,842 | INFO     | ..............................
[2025-11-25 10:54:26] 2025-11-25 15:53:37,917 | INFO     | time since job start (57240s) is within the limit (172800.0s)
[2025-11-25 10:54:26] 2025-11-25 15:53:38,030 | INFO     | 
[2025-11-25 10:54:26] 2025-11-25 15:53:38,035 | INFO     | job summary report
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | --------------------------------------------------
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | PanDA job id: 6895355809
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | task id: 47556137
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | errors: (none)
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | pilot state: finished 
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | transexitcode: 0
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | exeerrorcode: 0
[2025-11-25 10:54:26] 2025-11-25 15:53:38,036 | INFO     | exeerrordiag: 
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | exitcode: 0
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | exitmsg: OK
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | cpuconsumptiontime: 294970 s
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | nevents: 1000
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | neventsw: 0
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | pid: 3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | pgrp: 3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | corecount: 8
[2025-11-25 10:54:26] 2025-11-25 15:53:38,037 | INFO     | event service: False
[2025-11-25 10:54:26] 2025-11-25 15:53:38,038 | INFO     | sizes: {0: 2284139, 1: 2284338, 6: 2284600, 12: 2284628, 57203: 2336796, 57208: 2345795, 57210: 2345979, 57224: 2346225}
[2025-11-25 10:54:26] 2025-11-25 15:53:38,038 | INFO     | --------------------------------------------------
[2025-11-25 10:54:26] 2025-11-25 15:53:38,038 | INFO     | 
[2025-11-25 10:54:26] 2025-11-25 15:53:38,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 10:54:26] 2025-11-25 15:53:38,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:54:26] 2025-11-25 15:53:38,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:54:26] 2025-11-25 15:53:38,157 | INFO     | job 6895355809 has completed (purged errors)
[2025-11-25 10:54:26] 2025-11-25 15:53:38,157 | INFO     | overall cleanup function is called
[2025-11-25 10:54:26] 2025-11-25 15:53:39,173 | INFO     | --- collectZombieJob: --- 10, [3505209]
[2025-11-25 10:54:26] 2025-11-25 15:53:39,173 | INFO     | zombie collector waiting for pid 3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:39,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:54:26] 2025-11-25 15:53:39,174 | INFO     | collected zombie processes
[2025-11-25 10:54:26] 2025-11-25 15:53:39,174 | INFO     | will attempt to kill all subprocesses of pid=3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:39,634 | INFO     | process IDs to be killed: [3505209] (in reverse order)
[2025-11-25 10:54:26] 2025-11-25 15:53:39,766 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:54:26] 2025-11-25 15:53:39,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:54:26] 2025-11-25 15:53:39,801 | INFO     | did not find any defunct processes belonging to 3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:39,821 | INFO     | did not find any defunct processes belonging to 3505209
[2025-11-25 10:54:26] 2025-11-25 15:53:39,822 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:54:26] 2025-11-25 15:53:39,823 | INFO     | ready for new job
[2025-11-25 10:54:26] 2025-11-25 15:53:39,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:54:26] 2025-11-25 15:53:39,827 | INFO     | ***************************************
[2025-11-25 10:54:26] 2025-11-25 15:53:39,828 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:54:26] 2025-11-25 15:53:39,828 | INFO     | ***************************************
[2025-11-25 10:54:26] 2025-11-25 15:53:39,828 | INFO     | 
[2025-11-25 10:54:26] 2025-11-25 15:53:39,830 | INFO     | architecture information:
[2025-11-25 10:54:26] 2025-11-25 15:53:39,831 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:54:26] 2025-11-25 15:53:39,852 | INFO     | cat /etc/os-release:
[2025-11-25 10:54:26] NAME="CentOS Linux"
[2025-11-25 10:54:26] VERSION="7 (Core)"
[2025-11-25 10:54:26] ID="centos"
[2025-11-25 10:54:26] ID_LIKE="rhel fedora"
[2025-11-25 10:54:26] VERSION_ID="7"
[2025-11-25 10:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:54:26] ANSI_COLOR="0;31"
[2025-11-25 10:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:54:26] HOME_URL="https://www.centos.org/"
[2025-11-25 10:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:54:26] 
[2025-11-25 10:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:54:26] 
[2025-11-25 10:54:26] 2025-11-25 15:53:39,853 | INFO     | ***************************************
[2025-11-25 10:54:26] 2025-11-25 15:53:40,359 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 10:54:26] 2025-11-25 15:53:40,382 | INFO     | sufficient remaining disk space (92725575680 B)
[2025-11-25 10:54:26] 2025-11-25 15:53:40,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:54:26] 2025-11-25 15:53:40,382 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:54:26] 2025-11-25 15:53:40,382 | INFO     | update_server=False
[2025-11-25 10:54:26] 2025-11-25 15:53:40,382 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:54:26] 2025-11-25 15:53:40,383 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:54:26] 2025-11-25 15:53:40,383 | INFO     | aborting loop
[2025-11-25 10:54:26] 2025-11-25 15:53:40,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:54:26] 2025-11-25 15:53:40,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:54:26] 2025-11-25 15:53:40,986 | INFO     | all payload control threads have been joined
[2025-11-25 10:54:26] 2025-11-25 15:53:41,218 | INFO     | all data control threads have been joined
[2025-11-25 10:54:26] 2025-11-25 15:53:41,278 | INFO     | all job control threads have been joined
[2025-11-25 10:54:26] 2025-11-25 15:53:41,390 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:41,391 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:41,447 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:41,741 | INFO     | [job] validate thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:41,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:41,992 | INFO     | [payload] control thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,001 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,223 | INFO     | [data] control thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,239 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,288 | INFO     | [job] control thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,478 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,526 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,808 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:42,884 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:43,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:54:26] 2025-11-25 15:53:44,071 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:53:44,403 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:54:26] 2025-11-25 15:54:11,956 | INFO     | PID=3494951 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 10:54:26] 2025-11-25 15:54:11,956 | INFO     | .. there are 41 such processes running
[2025-11-25 10:54:26] 2025-11-25 15:54:11,957 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:54:26] 2025-11-25 15:54:11,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:54:26] 2025-11-25 15:54:11,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:54:26] 2025-11-25 15:54:18,815 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:54:26] 2025-11-25 15:54:20,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944319010624)>', '<ExcThread(monitor, started 139943942788864)>']
[2025-11-25 10:54:26] 2025-11-25 15:54:21,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:54:26] 2025-11-25 15:54:21,018 | INFO     | [monitor] control thread has ended
[2025-11-25 10:54:26] 2025-11-25 15:54:25,541 | INFO     | all workflow threads have been joined
[2025-11-25 10:54:26] 2025-11-25 15:54:25,542 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:54:26] 2025-11-25 15:54:25,543 | INFO     | traces error code: 0
[2025-11-25 10:54:26] 2025-11-25 15:54:25,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:54:26] 2025-11-25 15:54:25,768 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:54:26] 2025-11-25 15:54:25,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:54:26] 2025-11-25 15:54:25,781 [wrapper] pilotpid: 3494951
[2025-11-25 10:54:26] 2025-11-25 15:54:25,810 [wrapper] Pilot exit status: 0
[2025-11-25 10:54:26] 2025-11-25 15:54:25,877 [wrapper] pandaids: 6895355809
[2025-11-25 10:54:26] 2025-11-25 15:54:25,975 [wrapper] cleanup supervisor_pilot 2305309 3494952
[2025-11-25 10:54:26] 2025-11-25 15:54:25,978 [wrapper] Test setup, not cleaning
[2025-11-25 10:54:26] 2025-11-25 15:54:25,985 [wrapper] apfmon messages muted
[2025-11-25 10:54:26] 2025-11-25 15:54:25,988 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:54:26] 2025-11-25 15:54:25,992 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:54:26]  *** Error codes and diagnostics ***
[2025-11-25 10:54:26]     "exeErrorCode": 0,
[2025-11-25 10:54:26]     "exeErrorDiag": "",
[2025-11-25 10:54:26]     "pilotErrorCode": 0,
[2025-11-25 10:54:26]     "pilotErrorDiag": "",
[2025-11-25 10:54:26]  *** Listing of results directory ***
[2025-11-25 10:54:26] total 1316228
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 04:07 queuedata.json
[2025-11-25 10:54:26] -rwx------. 1 boincer umatlas     36292 Nov 23 04:11 runpilot2-wrapper.sh
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas       100 Nov 24 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:54:26] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 18:59 run_atlas
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas       105 Nov 24 18:59 job.xml
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas 409987202 Nov 24 18:59 EVNT.47483658._000677.pool.root.1
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:59 start_atlas.sh
[2025-11-25 10:54:26] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 18:59 shared
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 18:59 input.tar.gz
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas         0 Nov 24 18:59 boinc_lockfile
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 18:59 pandaJob.out
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas        57 Nov 24 18:59 setup.sh.local
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas    991801 Nov 24 18:59 agis_schedconf.cvmfs.json
[2025-11-25 10:54:26] drwx------. 5 boincer umatlas      4096 Nov 24 18:59 pilot3
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas       533 Nov 25 10:35 boinc_task_state.xml
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas      6660 Nov 25 10:48 init_data.xml
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas 914756222 Nov 25 10:52 HITS.47556137._006727.pool.root.1
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas      1057 Nov 25 10:53 memory_monitor_summary.json
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas   1516240 Nov 25 10:53 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas   2106976 Nov 25 10:53 log.47556137._006727.job.log.tgz.1
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas      8614 Nov 25 10:53 heartbeat.json
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas        95 Nov 25 10:54 pilot_heartbeat.json
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 10:54 boinc_mmap_file
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas        29 Nov 25 10:54 wrapper_checkpoint.txt
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas      4824 Nov 25 10:54 pilotlog.txt
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas   7464674 Nov 25 10:54 log.47556137._006727.job.log.1
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas       353 Nov 25 10:54 output.list
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas       620 Nov 25 10:54 runtime_log
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas   9594880 Nov 25 10:54 result.tar.gz
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas      9333 Nov 25 10:54 runtime_log.err
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas       658 Nov 25 10:54 BlJNDmsILh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTlKKDmEEHgUm.diag
[2025-11-25 10:54:26] -rw-r--r--. 1 boincer umatlas     21154 Nov 25 10:54 stderr.txt
[2025-11-25 10:54:26] HITS file was successfully produced:
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas 914756222 Nov 25 10:52 shared/HITS.pool.root.1
[2025-11-25 10:54:26]  *** Contents of shared directory: ***
[2025-11-25 10:54:26] total 1303676
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas 409987202 Nov 24 18:59 ATLAS.root_0
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 18:59 start_atlas.sh
[2025-11-25 10:54:26] -rw-r--r--. 2 boincer umatlas    590102 Nov 24 18:59 input.tar.gz
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas 914756222 Nov 25 10:52 HITS.pool.root.1
[2025-11-25 10:54:26] -rw-------. 1 boincer umatlas   9594880 Nov 25 10:54 result.tar.gz
10:54:28 (3491289): run_atlas exited; CPU time 296894.112005
10:54:28 (3491289): called boinc_finish(0)

</stderr_txt>
]]>

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