Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
12:08:18 (39804): wrapper (7.7.26015): starting
12:08:18 (39804): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:08:18] Arguments: --nthreads 12
[2025-11-25 12:08:18] Threads: 12
[2025-11-25 12:08:18] Checking for CVMFS
[2025-11-25 12:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:08:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:08:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:08:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:08:21] 2.13.3.0 3341 13 42216 153289 2 90 3078470 4096001 1896 130560 0 118104 99.984 2825 1362 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-25 12:08:21] CVMFS is ok
[2025-11-25 12:08:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 12:08:21] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-25 12:08:21] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-25 12:08:21] Further information can be found at the LHC@home message board.
[2025-11-25 12:08:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:08:21] Checking for apptainer binary...
[2025-11-25 12:08:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 12:08:21] Running /usr/bin/apptainer --version
[2025-11-25 12:08:21] apptainer version 1.4.4
[2025-11-25 12:08:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:08:21] zhiwei-Z790-Riptide-WiFi
[2025-11-25 12:08:21] apptainer works
[2025-11-25 12:08:21] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:08:21] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:08:21] Starting ATLAS job with PandaID=6893887851
[2025-11-25 12:08:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:51:00]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:51:00] 2025-11-25 20:50:19,463 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893887851/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,463 | INFO     | extracted standard info from prmon json
[2025-11-25 15:51:00] 2025-11-25 20:50:19,463 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:51:00] 2025-11-25 20:50:19,463 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:51:00] 2025-11-25 20:50:19,465 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:51:00] 2025-11-25 20:50:19,465 | INFO     | sum of square deviations: 3212454928.4587026
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | sum of deviations: 138877843438.18347
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | mean x: 1764097153.5137615
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | mean y: 3400534.6055045873
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | intersect: -76260395768.04784
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | chi2: 3.715882488921017
[2025-11-25 15:51:00] 2025-11-25 20:50:19,466 | INFO     | sum of square deviations: 2996442490.9577446
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | sum of deviations: 184566674414.77478
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | mean x: 1764097001.0140846
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | mean y: 3432455.408450704
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | intersect: -108656592826.16425
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | chi2: 2.1593834527935463
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | current chi2=2.1593834527935463 (change=41.887735706610904 %)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,467 | INFO     | sum of square deviations: 2790337215.9567494
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | sum of deviations: 176079463833.53357
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | mean x: 1764096848.5144231
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | mean y: 3426176.3221153845
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | intersect: -111316892192.56013
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | chi2: 2.1578303010822024
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | current chi2=2.1578303010822024 (change=0.07192570218756515 %)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | right removable region: 207
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | sum of square deviations: 2996440660.9577446
[2025-11-25 15:51:00] 2025-11-25 20:50:19,468 | INFO     | sum of deviations: 74133565451.08449
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | mean x: 1764097306.0140846
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | mean y: 3445925.6384976525
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | intersect: -43641277229.225006
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | chi2: 1.6558555085593216
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | current chi2=1.6558555085593216 (change=55.43843182618691 %)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | sum of square deviations: 2790333555.9567494
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | sum of deviations: 59739568411.86534
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | mean x: 1764097458.5144231
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | mean y: 3456571.7115384615
[2025-11-25 15:51:00] 2025-11-25 20:50:19,469 | INFO     | intersect: -37764938745.45164
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | chi2: 1.6273351279148516
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | current chi2=1.6273351279148516 (change=1.7223954926649503 %)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | left removable region: 20
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | sum of square deviations: 2027625484.9518654
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | sum of deviations: 75601863480.7059
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | mean x: 1764097428.0160427
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | mean y: 3504861.7647058824
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | intersect: -65772474928.06288
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | chi2: 0.020368611202510014
[2025-11-25 15:51:00] 2025-11-25 20:50:19,470 | INFO     | current memory leak: 37.29 B/s (using 187 data points, chi2=0.02)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | could have reported an average CPU frequency of 4375 MHz (11 samples)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | ..............................
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . Timing measurements:
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . get job = 0 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . initial setup = 2 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . payload setup = 4 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . stage-in = 0 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . payload execution = 13278 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . stage-out = 2 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | . log creation = 0 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,471 | INFO     | ..............................
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | 
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | job summary report
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | --------------------------------------------------
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | PanDA job id: 6893887851
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | task id: 47523449
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | errors: (none)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | pilot state: finished 
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | transexitcode: 0
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | exeerrorcode: 0
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | exeerrordiag: 
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | exitcode: 0
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | exitmsg: OK
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | cpuconsumptiontime: 118280 s
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | nevents: 1000
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | neventsw: 0
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | pid: 50692
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | pgrp: 50692
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | corecount: 12
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | event service: False
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | sizes: {0: 2284201, 1: 2284343, 4: 2284605, 11: 2284633, 13286: 2315897, 13288: 2325075, 13292: 2325265}
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | --------------------------------------------------
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | 
[2025-11-25 15:51:00] 2025-11-25 20:50:19,505 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | job 6893887851 has completed (purged errors)
[2025-11-25 15:51:00] 2025-11-25 20:50:19,516 | INFO     | overall cleanup function is called
[2025-11-25 15:51:00] 2025-11-25 20:50:19,862 | WARNING  | process 50692 can no longer be monitored (due to stat problems) - aborting
[2025-11-25 15:51:00] 2025-11-25 20:50:19,929 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:51:00] 2025-11-25 20:50:20,013 | INFO     | number of running child processes to parent process 50692: 1
[2025-11-25 15:51:00] 2025-11-25 20:50:20,013 | INFO     | maximum number of monitored processes: 17
[2025-11-25 15:51:00] 2025-11-25 20:50:20,013 | INFO     | aborting job monitoring since job object (job id=6893887851) has expired
[2025-11-25 15:51:00] 2025-11-25 20:50:20,525 | INFO     | --- collectZombieJob: --- 10, [50692]
[2025-11-25 15:51:00] 2025-11-25 20:50:20,526 | INFO     | zombie collector waiting for pid 50692
[2025-11-25 15:51:00] 2025-11-25 20:50:20,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:51:00] 2025-11-25 20:50:20,526 | INFO     | collected zombie processes
[2025-11-25 15:51:00] 2025-11-25 20:50:20,526 | INFO     | will attempt to kill all subprocesses of pid=50692
[2025-11-25 15:51:00] 2025-11-25 20:50:20,598 | INFO     | process IDs to be killed: [50692] (in reverse order)
[2025-11-25 15:51:00] 2025-11-25 20:50:20,628 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:51:00] 2025-11-25 20:50:20,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:51:00] 2025-11-25 20:50:20,631 | INFO     | did not find any defunct processes belonging to 50692
[2025-11-25 15:51:00] 2025-11-25 20:50:20,633 | INFO     | did not find any defunct processes belonging to 50692
[2025-11-25 15:51:00] 2025-11-25 20:50:20,634 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:51:00] 2025-11-25 20:50:20,634 | INFO     | ready for new job
[2025-11-25 15:51:00] 2025-11-25 20:50:20,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:51:00] 2025-11-25 20:50:20,635 | INFO     | ***************************************
[2025-11-25 15:51:00] 2025-11-25 20:50:20,635 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:51:00] 2025-11-25 20:50:20,635 | INFO     | ***************************************
[2025-11-25 15:51:00] 2025-11-25 20:50:20,635 | INFO     | 
[2025-11-25 15:51:00] 2025-11-25 20:50:20,636 | INFO     | architecture information:
[2025-11-25 15:51:00] 2025-11-25 20:50:20,636 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:51:00] 2025-11-25 20:50:20,643 | INFO     | cat /etc/os-release:
[2025-11-25 15:51:00] NAME="CentOS Linux"
[2025-11-25 15:51:00] VERSION="7 (Core)"
[2025-11-25 15:51:00] ID="centos"
[2025-11-25 15:51:00] ID_LIKE="rhel fedora"
[2025-11-25 15:51:00] VERSION_ID="7"
[2025-11-25 15:51:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:51:00] ANSI_COLOR="0;31"
[2025-11-25 15:51:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:51:00] HOME_URL="https://www.centos.org/"
[2025-11-25 15:51:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:51:00] 
[2025-11-25 15:51:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:51:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:51:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:51:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:51:00] 
[2025-11-25 15:51:00] 2025-11-25 20:50:20,643 | INFO     | ***************************************
[2025-11-25 15:51:00] 2025-11-25 20:50:21,146 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | INFO     | sufficient remaining disk space (1816614928384 B)
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | INFO     | update_server=False
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:51:00] 2025-11-25 20:50:21,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:51:00] 2025-11-25 20:50:21,156 | INFO     | aborting loop
[2025-11-25 15:51:00] 2025-11-25 20:50:21,475 | INFO     | all job control threads have been joined
[2025-11-25 15:51:00] 2025-11-25 20:50:21,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:51:00] 2025-11-25 20:50:22,160 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,161 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,161 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,163 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,188 | INFO     | all data control threads have been joined
[2025-11-25 15:51:00] 2025-11-25 20:50:22,197 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,241 | INFO     | all payload control threads have been joined
[2025-11-25 15:51:00] 2025-11-25 20:50:22,481 | INFO     | [job] control thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,554 | INFO     | [job] validate thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,778 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:22,862 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:23,131 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:23,161 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:23,161 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:23,193 | INFO     | [data] control thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:23,247 | INFO     | [payload] control thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:25,504 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:31,237 | INFO     | job.realtimelogging is not enabled
[2025-11-25 15:51:00] 2025-11-25 20:50:32,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:51:00] 2025-11-25 20:50:51,048 | INFO     | PID=44009 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 15:51:00] 2025-11-25 20:50:51,049 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:51:00] 2025-11-25 20:50:51,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:51:00] 2025-11-25 20:50:51,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:51:00] 2025-11-25 20:50:54,113 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:51:00] 2025-11-25 20:50:55,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139020055410496)>', '<ExcThread(monitor, started 139019383969536)>']
[2025-11-25 15:51:00] 2025-11-25 20:50:56,073 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:51:00] 2025-11-25 20:50:56,074 | INFO     | [monitor] control thread has ended
[2025-11-25 15:51:00] 2025-11-25 20:51:00,288 | INFO     | all workflow threads have been joined
[2025-11-25 15:51:00] 2025-11-25 20:51:00,288 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:51:00] 2025-11-25 20:51:00,288 | INFO     | traces error code: 0
[2025-11-25 15:51:00] 2025-11-25 20:51:00,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:51:00] 2025-11-25 20:51:00,343 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:51:00] 2025-11-25 20:51:00,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:51:00] 2025-11-25 20:51:00,347 [wrapper] pilotpid: 44009
[2025-11-25 15:51:00] 2025-11-25 20:51:00,348 [wrapper] Pilot exit status: 0
[2025-11-25 15:51:00] 2025-11-25 20:51:00,356 [wrapper] pandaids: 6893887851
[2025-11-25 15:51:00] 2025-11-25 20:51:00,374 [wrapper] cleanup supervisor_pilot   79045 44010
[2025-11-25 15:51:00] 2025-11-25 20:51:00,376 [wrapper] Test setup, not cleaning
[2025-11-25 15:51:00] 2025-11-25 20:51:00,377 [wrapper] apfmon messages muted
[2025-11-25 15:51:00] 2025-11-25 20:51:00,379 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:51:00] 2025-11-25 20:51:00,380 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:51:00]  *** Error codes and diagnostics ***
[2025-11-25 15:51:00]     "exeErrorCode": 0,
[2025-11-25 15:51:00]     "exeErrorDiag": "",
[2025-11-25 15:51:00]     "pilotErrorCode": 0,
[2025-11-25 15:51:00]     "pilotErrorDiag": "",
[2025-11-25 15:51:00]  *** Listing of results directory ***
[2025-11-25 15:51:00] total 1306536
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc    576529 Nov 20 18:11 pilot3.tar.gz
[2025-11-25 15:51:00] -rwx------ 1 boinc boinc     36292 Nov 20 18:53 runpilot2-wrapper.sh
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc      5112 Nov 20 18:53 queuedata.json
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc       100 Nov 25 12:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:51:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 12:08 run_atlas
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc       105 Nov 25 12:08 job.xml
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc 411317288 Nov 25 12:08 EVNT.47493127._000990.pool.root.1
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc    590101 Nov 25 12:08 input.tar.gz
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:08 start_atlas.sh
[2025-11-25 15:51:00] drwxrwx--x 2 boinc boinc      4096 Nov 25 12:08 shared
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc         0 Nov 25 12:08 boinc_setup_complete
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc      8826 Nov 25 12:08 init_data.xml
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc         0 Nov 25 12:08 boinc_lockfile
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc      2786 Nov 25 12:08 pandaJob.out
[2025-11-25 15:51:00] -rw------- 1 boinc boinc    991543 Nov 25 12:08 agis_schedconf.cvmfs.json
[2025-11-25 15:51:00] drwx------ 5 boinc boinc      4096 Nov 25 12:08 pilot3
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc       533 Nov 25 15:45 boinc_task_state.xml
[2025-11-25 15:51:00] -rw------- 1 boinc boinc 914930727 Nov 25 15:49 HITS.47523449._009898.pool.root.1
[2025-11-25 15:51:00] -rw------- 1 boinc boinc      1027 Nov 25 15:50 memory_monitor_summary.json
[2025-11-25 15:51:00] -rw------- 1 boinc boinc   1516240 Nov 25 15:50 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:51:00] -rw------- 1 boinc boinc   1960603 Nov 25 15:50 log.47523449._009898.job.log.tgz.1
[2025-11-25 15:51:00] -rw------- 1 boinc boinc      8592 Nov 25 15:50 heartbeat.json
[2025-11-25 15:51:00] -rw------- 1 boinc boinc        95 Nov 25 15:50 pilot_heartbeat.json
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc      8192 Nov 25 15:50 boinc_mmap_file
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc        29 Nov 25 15:50 wrapper_checkpoint.txt
[2025-11-25 15:51:00] -rw------- 1 boinc boinc      4820 Nov 25 15:51 pilotlog.txt
[2025-11-25 15:51:00] -rw------- 1 boinc boinc   1896569 Nov 25 15:51 log.47523449._009898.job.log.1
[2025-11-25 15:51:00] -rw------- 1 boinc boinc       353 Nov 25 15:51 output.list
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc       620 Nov 25 15:51 runtime_log
[2025-11-25 15:51:00] -rw------- 1 boinc boinc   3880960 Nov 25 15:51 result.tar.gz
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc      8856 Nov 25 15:51 runtime_log.err
[2025-11-25 15:51:00] -rw------- 1 boinc boinc       667 Nov 25 15:51 jFSNDm7dTg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsAHKDm25GaBn.diag
[2025-11-25 15:51:00] -rw-r--r-- 1 boinc boinc     21390 Nov 25 15:51 stderr.txt
[2025-11-25 15:51:00] HITS file was successfully produced:
[2025-11-25 15:51:00] -rw------- 1 boinc boinc 914930727 Nov 25 15:49 shared/HITS.pool.root.1
[2025-11-25 15:51:00]  *** Contents of shared directory: ***
[2025-11-25 15:51:00] total 1299564
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc 411317288 Nov 25 12:08 ATLAS.root_0
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc    590101 Nov 25 12:08 input.tar.gz
[2025-11-25 15:51:00] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:08 start_atlas.sh
[2025-11-25 15:51:00] -rw------- 1 boinc boinc 914930727 Nov 25 15:49 HITS.pool.root.1
[2025-11-25 15:51:00] -rw------- 1 boinc boinc   3880960 Nov 25 15:51 result.tar.gz
15:51:02 (39804): run_atlas exited; CPU time 118226.659226
15:51:02 (39804): called boinc_finish(0)

</stderr_txt>
]]>

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