Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:51 (16750): wrapper (7.7.26015): starting
23:38:51 (16750): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 23:38:51] Arguments: --nthreads 8
[2025-11-23 23:38:51] Threads: 8
[2025-11-23 23:38:51] Checking for CVMFS
[2025-11-23 23:38:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 23:38:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 23:38:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 23:38:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 23:38:52] 2.11.2.0 5808 167022 109380 153233 0 81 11498176 18432001 2827 130560 0 109720005 99.948 8431434 6588 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-23 23:38:52] CVMFS is ok
[2025-11-23 23:38:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 23:38:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 23:38:52] Further information can be found at the LHC@home message board.
[2025-11-23 23:38:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 23:38:52] Checking for apptainer binary...
[2025-11-23 23:38:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 23:38:52] Running /usr/bin/apptainer --version
[2025-11-23 23:38:52] apptainer version 1.3.2-1.el7
[2025-11-23 23:38:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 23:38:52] c-9-34.aglt2.org
[2025-11-23 23:38:52] apptainer works
[2025-11-23 23:38:52] Set ATHENA_PROC_NUMBER=8
[2025-11-23 23:38:52] Set ATHENA_CORE_NUMBER=8
[2025-11-23 23:38:52] Starting ATLAS job with PandaID=6895355814
[2025-11-23 23:38:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:12:57]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:12:57] 2025-11-24 22:12:06,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,091 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:12:57] 2025-11-24 22:12:07,095 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.926781250001
[2025-11-24 17:12:57] 2025-11-24 22:12:07,098 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895355814/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,099 | INFO     | extracted standard info from prmon json
[2025-11-24 17:12:57] 2025-11-24 22:12:07,099 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:12:57] 2025-11-24 22:12:07,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:12:57] 2025-11-24 22:12:07,117 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:12:57] 2025-11-24 22:12:07,119 | INFO     | sum of square deviations: 344790452153.25433
[2025-11-24 17:12:57] 2025-11-24 22:12:07,151 | INFO     | sum of deviations: 1801955944268.794
[2025-11-24 17:12:57] 2025-11-24 22:12:07,152 | INFO     | mean x: 1763990739.138031
[2025-11-24 17:12:57] 2025-11-24 22:12:07,152 | INFO     | mean y: 2866704.644787645
[2025-11-24 17:12:57] 2025-11-24 22:12:07,152 | INFO     | intersect: -9216163515.519264
[2025-11-24 17:12:57] 2025-11-24 22:12:07,153 | INFO     | chi2: 5.444425188430645
[2025-11-24 17:12:57] 2025-11-24 22:12:07,155 | INFO     | sum of square deviations: 339822542001.2162
[2025-11-24 17:12:57] 2025-11-24 22:12:07,182 | INFO     | sum of deviations: 2122708268383.952
[2025-11-24 17:12:57] 2025-11-24 22:12:07,183 | INFO     | mean x: 1763990586.6411252
[2025-11-24 17:12:57] 2025-11-24 22:12:07,183 | INFO     | mean y: 2876544.9728419012
[2025-11-24 17:12:57] 2025-11-24 22:12:07,183 | INFO     | intersect: -11015925743.9029
[2025-11-24 17:12:57] 2025-11-24 22:12:07,184 | INFO     | chi2: 2.6287837301545967
[2025-11-24 17:12:57] 2025-11-24 22:12:07,184 | INFO     | current chi2=2.6287837301545967 (change=51.71604642964442 %)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,186 | INFO     | sum of square deviations: 334902586236.6513
[2025-11-24 17:12:57] 2025-11-24 22:12:07,218 | INFO     | sum of deviations: 2256267643683.7793
[2025-11-24 17:12:57] 2025-11-24 22:12:07,218 | INFO     | mean x: 1763990434.1442494
[2025-11-24 17:12:57] 2025-11-24 22:12:07,218 | INFO     | mean y: 2880680.9541910333
[2025-11-24 17:12:57] 2025-11-24 22:12:07,218 | INFO     | intersect: -11881275201.661095
[2025-11-24 17:12:57] 2025-11-24 22:12:07,220 | INFO     | chi2: 1.9967889885602443
[2025-11-24 17:12:57] 2025-11-24 22:12:07,220 | INFO     | current chi2=1.9967889885602443 (change=24.041336468450574 %)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,220 | INFO     | right removable region: 1025
[2025-11-24 17:12:57] 2025-11-24 22:12:07,222 | INFO     | sum of square deviations: 339822138791.2166
[2025-11-24 17:12:57] 2025-11-24 22:12:07,254 | INFO     | sum of deviations: 1568021069112.9175
[2025-11-24 17:12:57] 2025-11-24 22:12:07,254 | INFO     | mean x: 1763990891.6411252
[2025-11-24 17:12:57] 2025-11-24 22:12:07,255 | INFO     | mean y: 2873873.7943743938
[2025-11-24 17:12:57] 2025-11-24 22:12:07,255 | INFO     | intersect: -8136604306.336655
[2025-11-24 17:12:57] 2025-11-24 22:12:07,256 | INFO     | chi2: 3.72583781399739
[2025-11-24 17:12:57] 2025-11-24 22:12:07,257 | INFO     | current chi2=3.72583781399739 (change=31.56600219404682 %)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,258 | INFO     | sum of square deviations: 334901842951.93835
[2025-11-24 17:12:57] 2025-11-24 22:12:07,289 | INFO     | sum of deviations: 1501441216197.1814
[2025-11-24 17:12:57] 2025-11-24 22:12:07,289 | INFO     | mean x: 1763991044.1432748
[2025-11-24 17:12:57] 2025-11-24 22:12:07,289 | INFO     | mean y: 2875936.910331384
[2025-11-24 17:12:57] 2025-11-24 22:12:07,289 | INFO     | intersect: -7905497559.43828
[2025-11-24 17:12:57] 2025-11-24 22:12:07,291 | INFO     | chi2: 3.679053970831149
[2025-11-24 17:12:57] 2025-11-24 22:12:07,291 | INFO     | current chi2=3.679053970831149 (change=1.2556596798304336 %)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,291 | INFO     | left removable region: 20
[2025-11-24 17:12:57] 2025-11-24 22:12:07,292 | INFO     | sum of square deviations: 314755946314.7127
[2025-11-24 17:12:57] 2025-11-24 22:12:07,322 | INFO     | sum of deviations: 1861551066628.7046
[2025-11-24 17:12:57] 2025-11-24 22:12:07,322 | INFO     | mean x: 1763991013.6497512
[2025-11-24 17:12:57] 2025-11-24 22:12:07,322 | INFO     | mean y: 2892864.6099502486
[2025-11-24 17:12:57] 2025-11-24 22:12:07,322 | INFO     | intersect: -10429822994.870066
[2025-11-24 17:12:57] 2025-11-24 22:12:07,324 | INFO     | chi2: 0.20510062892373782
[2025-11-24 17:12:57] 2025-11-24 22:12:07,324 | INFO     | current memory leak: 5.91 B/s (using 1005 data points, chi2=0.21)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,325 | INFO     | could have reported an average CPU frequency of 2999 MHz (38 samples)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | ..............................
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . Timing measurements:
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . get job = 0 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . initial setup = 2 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . payload setup = 5 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . stage-in = 0 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,326 | INFO     | . payload execution = 63145 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,327 | INFO     | . stage-out = 3 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,327 | INFO     | . log creation = 0 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,327 | INFO     | ..............................
[2025-11-24 17:12:57] 2025-11-24 22:12:07,975 | INFO     | 
[2025-11-24 17:12:57] 2025-11-24 22:12:07,975 | INFO     | job summary report
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | --------------------------------------------------
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | PanDA job id: 6895355814
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | task id: 47556137
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | errors: (none)
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:12:57] 2025-11-24 22:12:07,976 | INFO     | pilot state: finished 
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | transexitcode: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | exeerrorcode: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | exeerrordiag: 
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | exitcode: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | exitmsg: OK
[2025-11-24 17:12:57] 2025-11-24 22:12:07,977 | INFO     | cpuconsumptiontime: 485127 s
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | nevents: 1000
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | neventsw: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | pid: 27811
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | pgrp: 27811
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | corecount: 8
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | event service: False
[2025-11-24 17:12:57] 2025-11-24 22:12:07,978 | INFO     | sizes: {0: 2298807, 5: 2299069, 11: 2299125, 63154: 2352315, 63158: 2362100, 63162: 2362156, 63167: 2362530}
[2025-11-24 17:12:57] 2025-11-24 22:12:07,979 | INFO     | --------------------------------------------------
[2025-11-24 17:12:57] 2025-11-24 22:12:07,979 | INFO     | 
[2025-11-24 17:12:57] 2025-11-24 22:12:07,979 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 17:12:57] 2025-11-24 22:12:08,017 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,019 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:12:57] 2025-11-24 22:12:08,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:12:57] 2025-11-24 22:12:08,021 | INFO     | job 6895355814 has completed (purged errors)
[2025-11-24 17:12:57] 2025-11-24 22:12:08,021 | INFO     | overall cleanup function is called
[2025-11-24 17:12:57] 2025-11-24 22:12:09,038 | INFO     | --- collectZombieJob: --- 10, [27811]
[2025-11-24 17:12:57] 2025-11-24 22:12:09,038 | INFO     | zombie collector waiting for pid 27811
[2025-11-24 17:12:57] 2025-11-24 22:12:09,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:12:57] 2025-11-24 22:12:09,038 | INFO     | collected zombie processes
[2025-11-24 17:12:57] 2025-11-24 22:12:09,038 | INFO     | will attempt to kill all subprocesses of pid=27811
[2025-11-24 17:12:57] 2025-11-24 22:12:09,328 | INFO     | process IDs to be killed: [27811] (in reverse order)
[2025-11-24 17:12:57] 2025-11-24 22:12:09,420 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:12:57] 2025-11-24 22:12:09,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:12:57] 2025-11-24 22:12:09,432 | INFO     | did not find any defunct processes belonging to 27811
[2025-11-24 17:12:57] 2025-11-24 22:12:09,442 | INFO     | did not find any defunct processes belonging to 27811
[2025-11-24 17:12:57] 2025-11-24 22:12:09,444 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:12:57] 2025-11-24 22:12:09,444 | INFO     | ready for new job
[2025-11-24 17:12:57] 2025-11-24 22:12:09,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:12:57] 2025-11-24 22:12:09,450 | INFO     | ***************************************
[2025-11-24 17:12:57] 2025-11-24 22:12:09,450 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:12:57] 2025-11-24 22:12:09,450 | INFO     | ***************************************
[2025-11-24 17:12:57] 2025-11-24 22:12:09,450 | INFO     | 
[2025-11-24 17:12:57] 2025-11-24 22:12:09,452 | INFO     | architecture information:
[2025-11-24 17:12:57] 2025-11-24 22:12:09,452 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:12:57] 2025-11-24 22:12:09,472 | INFO     | cat /etc/os-release:
[2025-11-24 17:12:57] NAME="CentOS Linux"
[2025-11-24 17:12:57] VERSION="7 (Core)"
[2025-11-24 17:12:57] ID="centos"
[2025-11-24 17:12:57] ID_LIKE="rhel fedora"
[2025-11-24 17:12:57] VERSION_ID="7"
[2025-11-24 17:12:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:12:57] ANSI_COLOR="0;31"
[2025-11-24 17:12:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:12:57] HOME_URL="https://www.centos.org/"
[2025-11-24 17:12:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:12:57] 
[2025-11-24 17:12:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:12:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:12:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:12:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:12:57] 
[2025-11-24 17:12:57] 2025-11-24 22:12:09,473 | INFO     | ***************************************
[2025-11-24 17:12:57] 2025-11-24 22:12:09,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 17:12:57] 2025-11-24 22:12:10,028 | INFO     | sufficient remaining disk space (102863208448 B)
[2025-11-24 17:12:57] 2025-11-24 22:12:10,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:12:57] 2025-11-24 22:12:10,028 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:12:57] 2025-11-24 22:12:10,028 | INFO     | update_server=False
[2025-11-24 17:12:57] 2025-11-24 22:12:10,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:12:57] 2025-11-24 22:12:10,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:12:57] 2025-11-24 22:12:10,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:12:57] 2025-11-24 22:12:10,029 | INFO     | aborting loop
[2025-11-24 17:12:57] 2025-11-24 22:12:10,286 | INFO     | all data control threads have been joined
[2025-11-24 17:12:57] 2025-11-24 22:12:10,326 | INFO     | all payload control threads have been joined
[2025-11-24 17:12:57] 2025-11-24 22:12:11,030 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,034 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,092 | INFO     | all job control threads have been joined
[2025-11-24 17:12:57] 2025-11-24 22:12:11,129 | INFO     | [job] validate thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,265 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,292 | INFO     | [data] control thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,331 | INFO     | [payload] control thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,388 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,752 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:11,760 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:12,036 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:12,098 | INFO     | [job] control thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:12,274 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:12,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:12:57] 2025-11-24 22:12:12,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:12:57] 2025-11-24 22:12:12,594 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:13,493 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:16,585 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:20,853 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:12:57] 2025-11-24 22:12:21,859 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:12:57] 2025-11-24 22:12:38,165 | INFO     | 63186s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 17:12:57] 2025-11-24 22:12:39,510 | INFO     | PID=21029 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 17:12:57] 2025-11-24 22:12:39,511 | INFO     | .. there are 4 such processes running
[2025-11-24 17:12:57] 2025-11-24 22:12:39,511 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:12:57] 2025-11-24 22:12:39,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:12:57] 2025-11-24 22:12:39,512 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:12:57] 2025-11-24 22:12:50,252 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:12:57] 2025-11-24 22:12:52,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050476586816)>', '<ExcThread(monitor, started 140049798645504)>']
[2025-11-24 17:12:57] 2025-11-24 22:12:52,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:12:57] 2025-11-24 22:12:52,579 | INFO     | [monitor] control thread has ended
[2025-11-24 17:12:57] 2025-11-24 22:12:57,136 | INFO     | all workflow threads have been joined
[2025-11-24 17:12:57] 2025-11-24 22:12:57,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:12:57] 2025-11-24 22:12:57,137 | INFO     | traces error code: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:57,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:12:57] 2025-11-24 22:12:57,279 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:12:57] 2025-11-24 22:12:57,281 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:12:57] 2025-11-24 22:12:57,283 [wrapper] pilotpid: 21029
[2025-11-24 17:12:57] 2025-11-24 22:12:57,285 [wrapper] Pilot exit status: 0
[2025-11-24 17:12:57] 2025-11-24 22:12:57,295 [wrapper] pandaids: 6895355814
[2025-11-24 17:12:57] 2025-11-24 22:12:57,343 [wrapper] cleanup supervisor_pilot 16694 21030
[2025-11-24 17:12:57] 2025-11-24 22:12:57,345 [wrapper] Test setup, not cleaning
[2025-11-24 17:12:57] 2025-11-24 22:12:57,346 [wrapper] apfmon messages muted
[2025-11-24 17:12:57] 2025-11-24 22:12:57,348 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:12:57] 2025-11-24 22:12:57,351 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:12:57]  *** Error codes and diagnostics ***
[2025-11-24 17:12:57]     "exeErrorCode": 0,
[2025-11-24 17:12:57]     "exeErrorDiag": "",
[2025-11-24 17:12:57]     "pilotErrorCode": 0,
[2025-11-24 17:12:57]     "pilotErrorDiag": "",
[2025-11-24 17:12:57]  *** Listing of results directory ***
[2025-11-24 17:12:57] total 1333084
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 04:13 queuedata.json
[2025-11-24 17:12:57] -rwx------ 1 boincer umatlas     36292 Nov 23 04:14 runpilot2-wrapper.sh
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas       100 Nov 23 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:12:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 23:38 run_atlas
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas       105 Nov 23 23:38 job.xml
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas 410172421 Nov 23 23:38 EVNT.47483658._000678.pool.root.1
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 23:38 start_atlas.sh
[2025-11-24 17:12:57] drwxrwx--x 2 boincer umatlas      4096 Nov 23 23:38 shared
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 23:38 input.tar.gz
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas         0 Nov 23 23:38 boinc_lockfile
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 23:38 pandaJob.out
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas        57 Nov 23 23:38 setup.sh.local
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas    989786 Nov 23 23:39 agis_schedconf.cvmfs.json
[2025-11-24 17:12:57] drwx------ 5 boincer umatlas      4096 Nov 23 23:39 pilot3
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas      6038 Nov 24 17:01 init_data.xml
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas       533 Nov 24 17:01 boinc_task_state.xml
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas 929333528 Nov 24 17:11 HITS.47556137._006732.pool.root.1
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas      1063 Nov 24 17:11 memory_monitor_summary.json
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas   1516227 Nov 24 17:11 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas   2223520 Nov 24 17:11 log.47556137._006732.job.log.tgz.1
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas      8638 Nov 24 17:12 heartbeat.json
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas        95 Nov 24 17:12 pilot_heartbeat.json
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:12 boinc_mmap_file
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:12 wrapper_checkpoint.txt
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas      5010 Nov 24 17:12 pilotlog.txt
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas   8604589 Nov 24 17:12 log.47556137._006732.job.log.1
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas       353 Nov 24 17:12 output.list
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:12 runtime_log
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas  10844160 Nov 24 17:12 result.tar.gz
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas      9333 Nov 24 17:12 runtime_log.err
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas       666 Nov 24 17:12 nVZMDmrLLh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmelKKDminEmyn.diag
[2025-11-24 17:12:57] -rw-r--r-- 1 boincer umatlas     21287 Nov 24 17:12 stderr.txt
[2025-11-24 17:12:57] HITS file was successfully produced:
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas 929333528 Nov 24 17:11 shared/HITS.pool.root.1
[2025-11-24 17:12:57]  *** Contents of shared directory: ***
[2025-11-24 17:12:57] total 1319312
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas 410172421 Nov 23 23:38 ATLAS.root_0
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 23:38 start_atlas.sh
[2025-11-24 17:12:57] -rw-r--r-- 2 boincer umatlas    590101 Nov 23 23:38 input.tar.gz
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas 929333528 Nov 24 17:11 HITS.pool.root.1
[2025-11-24 17:12:57] -rw------- 1 boincer umatlas  10844160 Nov 24 17:12 result.tar.gz
17:12:58 (16750): run_atlas exited; CPU time 485463.079715
17:12:58 (16750): called boinc_finish(0)

</stderr_txt>
]]>

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