Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:49 (431244): wrapper (7.7.26015): starting
00:01:49 (431244): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 00:01:49] Arguments: --nthreads 8
[2025-11-24 00:01:49] Threads: 8
[2025-11-24 00:01:49] Checking for CVMFS
[2025-11-24 00:01:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:01:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:01:50] 2.13.3.0 7489 26723 373384 153233 3 404 22868061 32935937 19393 16776704 0 179347913 99.653 164659717 40932 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:01:50] CVMFS is ok
[2025-11-24 00:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:01:50] Further information can be found at the LHC@home message board.
[2025-11-24 00:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:01:50] Checking for apptainer binary...
[2025-11-24 00:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:01:50] Running /usr/bin/apptainer --version
[2025-11-24 00:01:50] apptainer version 1.4.4-1.el9
[2025-11-24 00:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:01:50] c7-13-32.aglt2.org
[2025-11-24 00:01:50] apptainer works
[2025-11-24 00:01:50] Set ATHENA_PROC_NUMBER=8
[2025-11-24 00:01:50] Set ATHENA_CORE_NUMBER=8
[2025-11-24 00:01:50] Starting ATLAS job with PandaID=6895355768
[2025-11-24 00:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:20:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:20:01] 2025-11-25 21:19:27,446 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3290.3992031249995
[2025-11-25 16:20:01] 2025-11-25 21:19:27,456 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6895355768/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:20:01] 2025-11-25 21:19:27,457 | INFO     | extracted standard info from prmon json
[2025-11-25 16:20:01] 2025-11-25 21:19:27,457 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:20:01] 2025-11-25 21:19:27,457 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:20:01] 2025-11-25 21:19:27,485 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:20:01] 2025-11-25 21:19:27,488 | INFO     | sum of square deviations: 4164365002651.9014
[2025-11-25 16:20:01] 2025-11-25 21:19:27,550 | INFO     | time since job start (145034s) is within the limit (172800.0s)
[2025-11-25 16:20:01] 2025-11-25 21:19:27,592 | INFO     | sum of deviations: 18260491916015.906
[2025-11-25 16:20:01] 2025-11-25 21:19:27,593 | INFO     | mean x: 1764033064.2965922
[2025-11-25 16:20:01] 2025-11-25 21:19:27,593 | INFO     | mean y: 2913910.4724442577
[2025-11-25 16:20:01] 2025-11-25 21:19:27,593 | INFO     | intersect: -7732265760.29603
[2025-11-25 16:20:01] 2025-11-25 21:19:27,595 | INFO     | chi2: 11.131413653278397
[2025-11-25 16:20:01] 2025-11-25 21:19:27,597 | INFO     | sum of square deviations: 4138141748005.476
[2025-11-25 16:20:01] 2025-11-25 21:19:27,703 | INFO     | sum of deviations: 19105022222186.055
[2025-11-25 16:20:01] 2025-11-25 21:19:27,703 | INFO     | mean x: 1764032911.8014333
[2025-11-25 16:20:01] 2025-11-25 21:19:27,703 | INFO     | mean y: 2918821.5139123104
[2025-11-25 16:20:01] 2025-11-25 21:19:27,703 | INFO     | intersect: -8141289384.229106
[2025-11-25 16:20:01] 2025-11-25 21:19:27,705 | INFO     | chi2: 7.693720940376766
[2025-11-25 16:20:01] 2025-11-25 21:19:27,705 | INFO     | current chi2=7.693720940376766 (change=30.882804466521378 %)
[2025-11-25 16:20:01] 2025-11-25 21:19:27,708 | INFO     | sum of square deviations: 4112028676564.5483
[2025-11-25 16:20:01] 2025-11-25 21:19:27,816 | INFO     | sum of deviations: 19375739481700.125
[2025-11-25 16:20:01] 2025-11-25 21:19:27,817 | INFO     | mean x: 1764032759.3058724
[2025-11-25 16:20:01] 2025-11-25 21:19:27,817 | INFO     | mean y: 2920401.7815800593
[2025-11-25 16:20:01] 2025-11-25 21:19:27,817 | INFO     | intersect: -8309142054.468335
[2025-11-25 16:20:01] 2025-11-25 21:19:27,819 | INFO     | chi2: 7.097558355969828
[2025-11-25 16:20:01] 2025-11-25 21:19:27,819 | INFO     | current chi2=7.097558355969828 (change=7.748689990538482 %)
[2025-11-25 16:20:01] 2025-11-25 21:19:27,819 | INFO     | right removable region: 2366
[2025-11-25 16:20:01] 2025-11-25 21:19:27,821 | INFO     | sum of square deviations: 4138138418015.48
[2025-11-25 16:20:01] 2025-11-25 21:19:27,926 | INFO     | sum of deviations: 17354328112254.898
[2025-11-25 16:20:01] 2025-11-25 21:19:27,926 | INFO     | mean x: 1764033216.8014333
[2025-11-25 16:20:01] 2025-11-25 21:19:27,926 | INFO     | mean y: 2919179.2672849917
[2025-11-25 16:20:01] 2025-11-25 21:19:27,926 | INFO     | intersect: -7394999438.440498
[2025-11-25 16:20:01] 2025-11-25 21:19:27,928 | INFO     | chi2: 7.570383889618026
[2025-11-25 16:20:01] 2025-11-25 21:19:27,928 | INFO     | current chi2=7.570383889618026 (change=31.990813337635558 %)
[2025-11-25 16:20:01] 2025-11-25 21:19:27,930 | INFO     | sum of square deviations: 4112022450420.156
[2025-11-25 16:20:01] 2025-11-25 21:19:28,031 | INFO     | sum of deviations: 16702668560633.871
[2025-11-25 16:20:01] 2025-11-25 21:19:28,031 | INFO     | mean x: 1764033369.30545
[2025-11-25 16:20:01] 2025-11-25 21:19:28,031 | INFO     | mean y: 2922984.2049007183
[2025-11-25 16:20:01] 2025-11-25 21:19:28,031 | INFO     | intersect: -7162423278.531729
[2025-11-25 16:20:01] 2025-11-25 21:19:28,033 | INFO     | chi2: 5.928506702069292
[2025-11-25 16:20:01] 2025-11-25 21:19:28,033 | INFO     | current chi2=5.928506702069292 (change=21.68816286582763 %)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,033 | INFO     | left removable region: 20
[2025-11-25 16:20:01] 2025-11-25 21:19:28,035 | INFO     | sum of square deviations: 4003544905717.5967
[2025-11-25 16:20:01] 2025-11-25 21:19:28,128 | INFO     | sum of deviations: 17263053913740.037
[2025-11-25 16:20:01] 2025-11-25 21:19:28,128 | INFO     | mean x: 1764033338.8137255
[2025-11-25 16:20:01] 2025-11-25 21:19:28,128 | INFO     | mean y: 2933160.0618073316
[2025-11-25 16:20:01] 2025-11-25 21:19:28,128 | INFO     | intersect: -7603476497.06126
[2025-11-25 16:20:01] 2025-11-25 21:19:28,130 | INFO     | chi2: 1.328236055042553
[2025-11-25 16:20:01] 2025-11-25 21:19:28,130 | INFO     | current memory leak: 4.31 B/s (using 2346 data points, chi2=1.33)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,131 | INFO     | could have reported an average CPU frequency of 3290 MHz (83 samples)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | ..............................
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . Timing measurements:
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . get job = 0 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . initial setup = 3 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . payload setup = 19 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . stage-in = 0 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . payload execution = 144960 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . stage-out = 3 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | . log creation = 1 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,132 | INFO     | ..............................
[2025-11-25 16:20:01] 2025-11-25 21:19:28,215 | INFO     | 
[2025-11-25 16:20:01] 2025-11-25 21:19:28,215 | INFO     | job summary report
[2025-11-25 16:20:01] 2025-11-25 21:19:28,215 | INFO     | --------------------------------------------------
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | PanDA job id: 6895355768
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | task id: 47556137
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | errors: (none)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | pilot state: finished 
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | transexitcode: 0
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | exeerrorcode: 0
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | exeerrordiag: 
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | exitcode: 0
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | exitmsg: OK
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | cpuconsumptiontime: 201554 s
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | nevents: 1000
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | neventsw: 0
[2025-11-25 16:20:01] 2025-11-25 21:19:28,216 | INFO     | pid: 478964
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | pgrp: 478964
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | corecount: 8
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | event service: False
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | sizes: {0: 2298806, 11: 2298806, 13: 2299096, 22: 2299152, 144983: 2390582, 144989: 2400556, 145003: 2400746}
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | --------------------------------------------------
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | 
[2025-11-25 16:20:01] 2025-11-25 21:19:28,217 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-25 16:20:01] 2025-11-25 21:19:28,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:20:01] 2025-11-25 21:19:28,245 | INFO     | job 6895355768 has completed (purged errors)
[2025-11-25 16:20:01] 2025-11-25 21:19:28,245 | INFO     | overall cleanup function is called
[2025-11-25 16:20:01] 2025-11-25 21:19:29,267 | INFO     | --- collectZombieJob: --- 10, [478964]
[2025-11-25 16:20:01] 2025-11-25 21:19:29,267 | INFO     | zombie collector waiting for pid 478964
[2025-11-25 16:20:01] 2025-11-25 21:19:29,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:20:01] 2025-11-25 21:19:29,268 | INFO     | collected zombie processes
[2025-11-25 16:20:01] 2025-11-25 21:19:29,268 | INFO     | will attempt to kill all subprocesses of pid=478964
[2025-11-25 16:20:01] 2025-11-25 21:19:29,732 | INFO     | process IDs to be killed: [478964] (in reverse order)
[2025-11-25 16:20:01] 2025-11-25 21:19:29,910 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:20:01] 2025-11-25 21:19:29,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:20:01] 2025-11-25 21:19:29,933 | INFO     | did not find any defunct processes belonging to 478964
[2025-11-25 16:20:01] 2025-11-25 21:19:29,954 | INFO     | did not find any defunct processes belonging to 478964
[2025-11-25 16:20:01] 2025-11-25 21:19:29,956 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:20:01] 2025-11-25 21:19:29,956 | INFO     | ready for new job
[2025-11-25 16:20:01] 2025-11-25 21:19:29,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:20:01] 2025-11-25 21:19:29,969 | INFO     | ***************************************
[2025-11-25 16:20:01] 2025-11-25 21:19:29,969 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:20:01] 2025-11-25 21:19:29,969 | INFO     | ***************************************
[2025-11-25 16:20:01] 2025-11-25 21:19:29,969 | INFO     | 
[2025-11-25 16:20:01] 2025-11-25 21:19:29,974 | INFO     | architecture information:
[2025-11-25 16:20:01] 2025-11-25 21:19:29,974 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:20:01] 2025-11-25 21:19:30,003 | INFO     | cat /etc/os-release:
[2025-11-25 16:20:01] NAME="CentOS Linux"
[2025-11-25 16:20:01] VERSION="7 (Core)"
[2025-11-25 16:20:01] ID="centos"
[2025-11-25 16:20:01] ID_LIKE="rhel fedora"
[2025-11-25 16:20:01] VERSION_ID="7"
[2025-11-25 16:20:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:20:01] ANSI_COLOR="0;31"
[2025-11-25 16:20:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:20:01] HOME_URL="https://www.centos.org/"
[2025-11-25 16:20:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:20:01] 
[2025-11-25 16:20:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:20:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:20:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:20:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:20:01] 
[2025-11-25 16:20:01] 2025-11-25 21:19:30,003 | INFO     | ***************************************
[2025-11-25 16:20:01] 2025-11-25 21:19:30,505 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-25 16:20:01] 2025-11-25 21:19:30,534 | INFO     | sufficient remaining disk space (86072360960 B)
[2025-11-25 16:20:01] 2025-11-25 21:19:30,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:20:01] 2025-11-25 21:19:30,535 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:20:01] 2025-11-25 21:19:30,535 | INFO     | update_server=False
[2025-11-25 16:20:01] 2025-11-25 21:19:30,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:20:01] 2025-11-25 21:19:30,755 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 16:20:01] 2025-11-25 21:19:30,757 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 16:20:01] 2025-11-25 21:19:30,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:20:01] 2025-11-25 21:19:30,759 | INFO     | will abort loop
[2025-11-25 16:20:01] 2025-11-25 21:19:31,029 | INFO     | all payload control threads have been joined
[2025-11-25 16:20:01] 2025-11-25 21:19:31,187 | INFO     | all data control threads have been joined
[2025-11-25 16:20:01] 2025-11-25 21:19:31,394 | INFO     | all job control threads have been joined
[2025-11-25 16:20:01] 2025-11-25 21:19:31,544 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,646 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,666 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:20:01] 2025-11-25 21:19:31,764 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,812 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,942 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:31,971 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:32,035 | INFO     | [payload] control thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:32,192 | INFO     | [data] control thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:32,265 | INFO     | [job] validate thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:32,399 | INFO     | [job] control thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:32,884 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:33,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:20:01] 2025-11-25 21:19:33,675 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:33,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:20:01] 2025-11-25 21:19:34,230 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:34,800 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:20:01] 2025-11-25 21:19:37,739 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:41,036 | INFO     | job.realtimelogging is not enabled
[2025-11-25 16:20:01] 2025-11-25 21:19:42,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:20:01] 2025-11-25 21:19:42,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607252596544)>', '<ExcThread(monitor, started 140606483457792)>']
[2025-11-25 16:20:01] 2025-11-25 21:19:47,181 | INFO     | all workflow threads have been joined
[2025-11-25 16:20:01] 2025-11-25 21:19:47,181 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:20:01] 2025-11-25 21:19:47,182 | INFO     | traces error code: 0
[2025-11-25 16:20:01] 2025-11-25 21:19:47,182 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | INFO     | PID=444185 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | INFO     | .. there are 34 such processes running
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:20:01] 2025-11-25 21:20:01,154 | INFO     | [monitor] control thread has ended
[2025-11-25 16:20:01] 2025-11-25 21:20:01,304 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:20:01] 2025-11-25 21:20:01,318 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:20:01] 2025-11-25 21:20:01,344 [wrapper] pilotpid: 444185
[2025-11-25 16:20:01] 2025-11-25 21:20:01,352 [wrapper] Pilot exit status: 0
[2025-11-25 16:20:01] 2025-11-25 21:20:01,379 [wrapper] pandaids: 6895355768
[2025-11-25 16:20:01] 2025-11-25 21:20:01,492 [wrapper] cleanup supervisor_pilot 4031401 444186
[2025-11-25 16:20:01] 2025-11-25 21:20:01,498 [wrapper] Test setup, not cleaning
[2025-11-25 16:20:01] 2025-11-25 21:20:01,502 [wrapper] apfmon messages muted
[2025-11-25 16:20:01] 2025-11-25 21:20:01,505 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:20:01] 2025-11-25 21:20:01,509 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:20:01]  *** Error codes and diagnostics ***
[2025-11-25 16:20:01]     "exeErrorCode": 0,
[2025-11-25 16:20:01]     "exeErrorDiag": "",
[2025-11-25 16:20:01]     "pilotErrorCode": 0,
[2025-11-25 16:20:01]     "pilotErrorDiag": "",
[2025-11-25 16:20:01]  *** Listing of results directory ***
[2025-11-25 16:20:01] total 1332272
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-25 16:20:01] -rwx------. 1 boincer umatlas     36292 Nov 23 03:52 runpilot2-wrapper.sh
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 03:52 queuedata.json
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:20:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:01 run_atlas
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:01 job.xml
[2025-11-25 16:20:01] -rw-r--r--. 2 boincer umatlas 409269762 Nov 24 00:01 EVNT.47483658._000673.pool.root.1
[2025-11-25 16:20:01] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 00:01 input.tar.gz
[2025-11-25 16:20:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-25 16:20:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:01 shared
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:01 boinc_lockfile
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 00:01 pandaJob.out
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas        57 Nov 24 00:01 setup.sh.local
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas    989786 Nov 24 00:02 agis_schedconf.cvmfs.json
[2025-11-25 16:20:01] drwx------. 5 boincer umatlas      4096 Nov 24 00:02 pilot3
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas       533 Nov 25 16:02 boinc_task_state.xml
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas      6902 Nov 25 16:13 init_data.xml
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas 906887020 Nov 25 16:18 HITS.47556137._006686.pool.root.1
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas      1059 Nov 25 16:19 memory_monitor_summary.json
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas   1516240 Nov 25 16:19 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas   3194778 Nov 25 16:19 log.47556137._006686.job.log.tgz.1
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas        95 Nov 25 16:19 pilot_heartbeat.json
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas      8603 Nov 25 16:19 heartbeat.json
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 16:19 boinc_mmap_file
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas        29 Nov 25 16:19 wrapper_checkpoint.txt
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas       822 Nov 25 16:20 pilotlog.txt
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas  18891877 Nov 25 16:20 log.47556137._006686.job.log.1
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas       353 Nov 25 16:20 output.list
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas       620 Nov 25 16:20 runtime_log
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas  22108160 Nov 25 16:20 result.tar.gz
[2025-11-25 16:20:01] -rw-------. 1 boincer umatlas       668 Nov 25 16:20 SSsMDmC1Kh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwkKKDmNnPrrn.diag
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas      9344 Nov 25 16:20 runtime_log.err
[2025-11-25 16:20:01] -rw-r--r--. 1 boincer umatlas     21292 Nov 25 16:20 stderr.txt
[2025-11-25 16:20:01] HITS file was successfully produced:
[2025-11-25 16:20:02] -rw-------. 1 boincer umatlas 906887020 Nov 25 16:18 shared/HITS.pool.root.1
[2025-11-25 16:20:02]  *** Contents of shared directory: ***
[2025-11-25 16:20:02] total 1307508
[2025-11-25 16:20:02] -rw-r--r--. 2 boincer umatlas 409269762 Nov 24 00:01 ATLAS.root_0
[2025-11-25 16:20:02] -rw-r--r--. 2 boincer umatlas    590100 Nov 24 00:01 input.tar.gz
[2025-11-25 16:20:02] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:01 start_atlas.sh
[2025-11-25 16:20:02] -rw-------. 1 boincer umatlas 906887020 Nov 25 16:18 HITS.pool.root.1
[2025-11-25 16:20:02] -rw-------. 1 boincer umatlas  22108160 Nov 25 16:20 result.tar.gz
16:20:03 (431244): run_atlas exited; CPU time 202909.978755
16:20:03 (431244): called boinc_finish(0)

</stderr_txt>
]]>

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