Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:08 (1598954): wrapper (7.7.26015): starting
00:04:08 (1598954): wrapper: running run_atlas (--nthreads 9)
[2025-11-25 00:04:08] Arguments: --nthreads 9
[2025-11-25 00:04:08] Threads: 9
[2025-11-25 00:04:08] Checking for CVMFS
[2025-11-25 00:04:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 00:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 00:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 00:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 00:04:11] 2.13.3.0 8749 28162 304576 153270 1 126 18548623 21042176 25325 16776704 0 117944586 99.535 140043190 31508 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-25 00:04:11] CVMFS is ok
[2025-11-25 00:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 00:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 00:04:11] Further information can be found at the LHC@home message board.
[2025-11-25 00:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 00:04:11] Checking for apptainer binary...
[2025-11-25 00:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 00:04:11] Running /usr/bin/apptainer --version
[2025-11-25 00:04:11] apptainer version 1.4.4-1.el9
[2025-11-25 00:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 00:04:11] c-16-10.aglt2.org
[2025-11-25 00:04:11] apptainer works
[2025-11-25 00:04:11] Set ATHENA_PROC_NUMBER=9
[2025-11-25 00:04:11] Set ATHENA_CORE_NUMBER=9
[2025-11-25 00:04:11] Starting ATLAS job with PandaID=6895355770
[2025-11-25 00:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:12:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:12:39] 2025-11-27 02:11:42,489 | INFO     | .. there are 43 such processes running
[2025-11-26 21:12:39] 2025-11-27 02:11:43,164 | INFO     | monitor loop #9701: job 0:6895355770 is in state 'finished'
[2025-11-26 21:12:39] 2025-11-27 02:11:43,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:12:39] 2025-11-27 02:11:43,499 | INFO     | time since job start (162418s) is within the limit (172800.0s)
[2025-11-26 21:12:39] 2025-11-27 02:11:45,505 | INFO     | time since job start (162420s) is within the limit (172800.0s)
[2025-11-26 21:12:39] 2025-11-27 02:11:45,669 | INFO     | monitor loop #9702: job 0:6895355770 is in state 'finished'
[2025-11-26 21:12:39] 2025-11-27 02:11:45,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:12:39] 2025-11-27 02:11:46,710 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 21:12:39] 2025-11-27 02:11:46,720 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9639500000003
[2025-11-26 21:12:39] 2025-11-27 02:11:46,729 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895355770/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:12:39] 2025-11-27 02:11:46,730 | INFO     | extracted standard info from prmon json
[2025-11-26 21:12:39] 2025-11-27 02:11:46,730 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:12:39] 2025-11-27 02:11:46,731 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:12:39] 2025-11-27 02:11:46,812 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:12:39] 2025-11-27 02:11:46,817 | INFO     | sum of square deviations: 5842601213915.224
[2025-11-26 21:12:39] 2025-11-27 02:11:47,017 | INFO     | sum of deviations: 15270257585732.947
[2025-11-26 21:12:39] 2025-11-27 02:11:47,018 | INFO     | mean x: 1764128295.2442691
[2025-11-26 21:12:39] 2025-11-27 02:11:47,018 | INFO     | mean y: 3126839.9477639985
[2025-11-26 21:12:39] 2025-11-27 02:11:47,018 | INFO     | intersect: -4607609456.498502
[2025-11-26 21:12:39] 2025-11-27 02:11:47,022 | INFO     | chi2: 12.782326539466835
[2025-11-26 21:12:39] 2025-11-27 02:11:47,026 | INFO     | sum of square deviations: 5809728937632.472
[2025-11-26 21:12:39] 2025-11-27 02:11:47,519 | INFO     | sum of deviations: 16241901268553.451
[2025-11-26 21:12:39] 2025-11-27 02:11:47,519 | INFO     | mean x: 1764128142.7466114
[2025-11-26 21:12:39] 2025-11-27 02:11:47,519 | INFO     | mean y: 3131347.2458584337
[2025-11-26 21:12:39] 2025-11-27 02:11:47,520 | INFO     | intersect: -4928733018.05504
[2025-11-26 21:12:39] 2025-11-27 02:11:47,523 | INFO     | chi2: 9.624520626846103
[2025-11-26 21:12:39] 2025-11-27 02:11:47,524 | INFO     | current chi2=9.624520626846103 (change=24.7044691189093 %)
[2025-11-26 21:12:39] 2025-11-27 02:11:47,524 | INFO     | right removable region: 2655
[2025-11-26 21:12:39] 2025-11-27 02:11:47,528 | INFO     | sum of square deviations: 5809726917922.468
[2025-11-26 21:12:39] 2025-11-27 02:11:47,549 | INFO     | time since job start (162422s) is within the limit (172800.0s)
[2025-11-26 21:12:39] 2025-11-27 02:11:47,860 | INFO     | sum of deviations: 14244504562493.857
[2025-11-26 21:12:39] 2025-11-27 02:11:47,860 | INFO     | mean x: 1764128447.7466114
[2025-11-26 21:12:39] 2025-11-27 02:11:47,860 | INFO     | mean y: 3131597.5109186745
[2025-11-26 21:12:39] 2025-11-27 02:11:47,861 | INFO     | intersect: -4322224151.178535
[2025-11-26 21:12:39] 2025-11-27 02:11:47,864 | INFO     | chi2: 9.534569686382776
[2025-11-26 21:12:39] 2025-11-27 02:11:47,864 | INFO     | current chi2=9.534569686382776 (change=25.408182485842882 %)
[2025-11-26 21:12:39] 2025-11-27 02:11:47,868 | INFO     | sum of square deviations: 5776976806955.665
[2025-11-26 21:12:39] 2025-11-27 02:11:48,072 | INFO     | sum of deviations: 13883936333083.229
[2025-11-26 21:12:39] 2025-11-27 02:11:48,072 | INFO     | mean x: 1764128600.2474537
[2025-11-26 21:12:39] 2025-11-27 02:11:48,073 | INFO     | mean y: 3133276.004149378
[2025-11-26 21:12:39] 2025-11-27 02:11:48,073 | INFO     | intersect: -4236636068.355424
[2025-11-26 21:12:39] 2025-11-27 02:11:48,077 | INFO     | chi2: 9.179432570390345
[2025-11-26 21:12:39] 2025-11-27 02:11:48,077 | INFO     | current chi2=9.179432570390345 (change=3.724731452743335 %)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,077 | INFO     | left removable region: 20
[2025-11-26 21:12:39] 2025-11-27 02:11:48,081 | INFO     | sum of square deviations: 5673006523139.689
[2025-11-26 21:12:39] 2025-11-27 02:11:48,225 | INFO     | monitor loop #9703: job 0:6895355770 is in state 'finished'
[2025-11-26 21:12:39] 2025-11-27 02:11:48,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,295 | INFO     | sum of deviations: 14542465539304.75
[2025-11-26 21:12:39] 2025-11-27 02:11:48,296 | INFO     | mean x: 1764128722.2497153
[2025-11-26 21:12:39] 2025-11-27 02:11:48,296 | INFO     | mean y: 3141360.3453510436
[2025-11-26 21:12:39] 2025-11-27 02:11:48,296 | INFO     | intersect: -4519113469.711803
[2025-11-26 21:12:39] 2025-11-27 02:11:48,317 | INFO     | chi2: 4.9851033110356635
[2025-11-26 21:12:39] 2025-11-27 02:11:48,317 | INFO     | current memory leak: 2.56 B/s (using 2635 data points, chi2=4.99)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,320 | INFO     | could have reported an average CPU frequency of 2873 MHz (92 samples)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,320 | INFO     | ..............................
[2025-11-26 21:12:39] 2025-11-27 02:11:48,320 | INFO     | . Timing measurements:
[2025-11-26 21:12:39] 2025-11-27 02:11:48,320 | INFO     | . get job = 0 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . initial setup = 4 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . payload setup = 19 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . stage-in = 0 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . payload execution = 162333 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . stage-out = 6 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | . log creation = 2 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,321 | INFO     | ..............................
[2025-11-26 21:12:39] 2025-11-27 02:11:48,506 | INFO     | 
[2025-11-26 21:12:39] 2025-11-27 02:11:48,506 | INFO     | job summary report
[2025-11-26 21:12:39] 2025-11-27 02:11:48,507 | INFO     | --------------------------------------------------
[2025-11-26 21:12:39] 2025-11-27 02:11:48,507 | INFO     | PanDA job id: 6895355770
[2025-11-26 21:12:39] 2025-11-27 02:11:48,507 | INFO     | task id: 47556137
[2025-11-26 21:12:39] 2025-11-27 02:11:48,507 | INFO     | errors: (none)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,507 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | pilot state: finished 
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | transexitcode: 0
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | exeerrorcode: 0
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | exeerrordiag: 
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | exitcode: 0
[2025-11-26 21:12:39] 2025-11-27 02:11:48,508 | INFO     | exitmsg: OK
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | cpuconsumptiontime: 519157 s
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | nevents: 1000
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | neventsw: 0
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | pid: 1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | pgrp: 1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:48,509 | INFO     | corecount: 9
[2025-11-26 21:12:39] 2025-11-27 02:11:48,510 | INFO     | event service: False
[2025-11-26 21:12:39] 2025-11-27 02:11:48,510 | INFO     | sizes: {0: 2284082, 1: 2284337, 2: 2284365, 12: 2284365, 15: 2284655, 23: 2284683, 162354: 2387205, 162355: 2387204, 162363: 2396259, 162366: 2396315, 162383: 2396
[2025-11-26 21:12:39] 2025-11-27 02:11:48,510 | INFO     | --------------------------------------------------
[2025-11-26 21:12:39] 2025-11-27 02:11:48,510 | INFO     | 
[2025-11-26 21:12:39] 2025-11-27 02:11:48,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-26 21:12:39] 2025-11-27 02:11:48,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,539 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:12:39] 2025-11-27 02:11:48,543 | INFO     | job 6895355770 has completed (purged errors)
[2025-11-26 21:12:39] 2025-11-27 02:11:48,543 | INFO     | overall cleanup function is called
[2025-11-26 21:12:39] 2025-11-27 02:11:49,565 | INFO     | --- collectZombieJob: --- 10, [1613435]
[2025-11-26 21:12:39] 2025-11-27 02:11:49,565 | INFO     | zombie collector waiting for pid 1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:49,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:12:39] 2025-11-27 02:11:49,565 | INFO     | collected zombie processes
[2025-11-26 21:12:39] 2025-11-27 02:11:49,566 | INFO     | will attempt to kill all subprocesses of pid=1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:51,090 | INFO     | process IDs to be killed: [1613435] (in reverse order)
[2025-11-26 21:12:39] 2025-11-27 02:11:51,306 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:12:39] 2025-11-27 02:11:51,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:12:39] 2025-11-27 02:11:51,336 | INFO     | did not find any defunct processes belonging to 1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:51,363 | INFO     | did not find any defunct processes belonging to 1613435
[2025-11-26 21:12:39] 2025-11-27 02:11:51,365 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:12:39] 2025-11-27 02:11:51,365 | INFO     | ready for new job
[2025-11-26 21:12:39] 2025-11-27 02:11:51,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:12:39] 2025-11-27 02:11:51,379 | INFO     | ***************************************
[2025-11-26 21:12:39] 2025-11-27 02:11:51,379 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:12:39] 2025-11-27 02:11:51,379 | INFO     | ***************************************
[2025-11-26 21:12:39] 2025-11-27 02:11:51,424 | INFO     | 
[2025-11-26 21:12:39] 2025-11-27 02:11:51,426 | INFO     | architecture information:
[2025-11-26 21:12:39] 2025-11-27 02:11:51,427 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:12:39] 2025-11-27 02:11:51,602 | INFO     | cat /etc/os-release:
[2025-11-26 21:12:39] NAME="CentOS Linux"
[2025-11-26 21:12:39] VERSION="7 (Core)"
[2025-11-26 21:12:39] ID="centos"
[2025-11-26 21:12:39] ID_LIKE="rhel fedora"
[2025-11-26 21:12:39] VERSION_ID="7"
[2025-11-26 21:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:12:39] ANSI_COLOR="0;31"
[2025-11-26 21:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:12:39] HOME_URL="https://www.centos.org/"
[2025-11-26 21:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:12:39] 
[2025-11-26 21:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:12:39] 
[2025-11-26 21:12:39] 2025-11-27 02:11:51,602 | INFO     | ***************************************
[2025-11-26 21:12:39] 2025-11-27 02:11:52,105 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-26 21:12:39] 2025-11-27 02:11:52,171 | INFO     | sufficient remaining disk space (48019537920 B)
[2025-11-26 21:12:39] 2025-11-27 02:11:52,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:12:39] 2025-11-27 02:11:52,172 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:12:39] 2025-11-27 02:11:52,172 | INFO     | update_server=False
[2025-11-26 21:12:39] 2025-11-27 02:11:52,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:12:39] 2025-11-27 02:11:52,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:12:39] 2025-11-27 02:11:52,174 | INFO     | aborting loop
[2025-11-26 21:12:39] 2025-11-27 02:11:52,209 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:12:39] 2025-11-27 02:11:52,538 | INFO     | all data control threads have been joined
[2025-11-26 21:12:39] 2025-11-27 02:11:52,560 | INFO     | all payload control threads have been joined
[2025-11-26 21:12:39] 2025-11-27 02:11:53,181 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,182 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,215 | INFO     | [job] validate thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,379 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,544 | INFO     | [data] control thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,561 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,566 | INFO     | [payload] control thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:12:39] 2025-11-27 02:11:53,799 | INFO     | all job control threads have been joined
[2025-11-26 21:12:39] 2025-11-27 02:11:53,852 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:53,999 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:54,189 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:54,216 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:54,372 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:54,671 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:54,805 | INFO     | [job] control thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:11:55,562 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:12:39] 2025-11-27 02:11:59,584 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:12:39] 2025-11-27 02:12:21,599 | INFO     | PID=1602795 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:12:39] 2025-11-27 02:12:21,600 | INFO     | .. there are 43 such processes running
[2025-11-26 21:12:39] 2025-11-27 02:12:21,602 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:12:39] 2025-11-27 02:12:21,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:12:39] 2025-11-27 02:12:21,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:12:39] 2025-11-27 02:12:33,316 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:12:39] 2025-11-27 02:12:33,880 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500022769472)>', '<ExcThread(monitor, started 140499318994688)>']
[2025-11-26 21:12:39] 2025-11-27 02:12:34,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:12:39] 2025-11-27 02:12:34,697 | INFO     | [monitor] control thread has ended
[2025-11-26 21:12:39] 2025-11-27 02:12:38,906 | INFO     | all workflow threads have been joined
[2025-11-26 21:12:39] 2025-11-27 02:12:38,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:12:39] 2025-11-27 02:12:38,906 | INFO     | traces error code: 0
[2025-11-26 21:12:39] 2025-11-27 02:12:38,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:12:39] 2025-11-27 02:12:39,112 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:12:39] 2025-11-27 02:12:39,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:12:39] 2025-11-27 02:12:39,197 [wrapper] pilotpid: 1602795
[2025-11-26 21:12:39] 2025-11-27 02:12:39,201 [wrapper] Pilot exit status: 0
[2025-11-26 21:12:39] 2025-11-27 02:12:39,241 [wrapper] pandaids: 6895355770
[2025-11-26 21:12:39] 2025-11-27 02:12:39,400 [wrapper] cleanup supervisor_pilot 2010597 1602796
[2025-11-26 21:12:39] 2025-11-27 02:12:39,415 [wrapper] Test setup, not cleaning
[2025-11-26 21:12:39] 2025-11-27 02:12:39,419 [wrapper] apfmon messages muted
[2025-11-26 21:12:39] 2025-11-27 02:12:39,426 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:12:39] 2025-11-27 02:12:39,429 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:12:39]  *** Error codes and diagnostics ***
[2025-11-26 21:12:39]     "exeErrorCode": 0,
[2025-11-26 21:12:39]     "exeErrorDiag": "",
[2025-11-26 21:12:39]     "pilotErrorCode": 0,
[2025-11-26 21:12:39]     "pilotErrorDiag": "",
[2025-11-26 21:12:39]  *** Listing of results directory ***
[2025-11-26 21:12:39] total 1331936
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 03:37 pilot3.tar.gz
[2025-11-26 21:12:39] -rwx------. 1 boincer umatlas     36292 Nov 23 03:52 runpilot2-wrapper.sh
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 03:52 queuedata.json
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas       100 Nov 25 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:12:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 25 00:04 run_atlas
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas       105 Nov 25 00:04 job.xml
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas 409269762 Nov 25 00:04 EVNT.47483658._000673.pool.root.1
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-26 21:12:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 25 00:04 shared
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:04 input.tar.gz
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas         0 Nov 25 00:04 boinc_lockfile
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas      2785 Nov 25 00:04 pandaJob.out
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas        57 Nov 25 00:04 setup.sh.local
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas    991801 Nov 25 00:04 agis_schedconf.cvmfs.json
[2025-11-26 21:12:39] drwx------. 5 boincer umatlas      4096 Nov 25 00:04 pilot3
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas       534 Nov 26 20:33 boinc_task_state.xml
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas 902800089 Nov 26 21:09 HITS.47556137._006688.pool.root.1
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas      1057 Nov 26 21:11 memory_monitor_summary.json
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas   1516240 Nov 26 21:11 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas   3471326 Nov 26 21:11 log.47556137._006688.job.log.tgz.1
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas      8615 Nov 26 21:11 heartbeat.json
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas      6525 Nov 26 21:11 init_data.xml
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas        95 Nov 26 21:12 pilot_heartbeat.json
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas        30 Nov 26 21:12 wrapper_checkpoint.txt
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas      4824 Nov 26 21:12 pilotlog.txt
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas  20480456 Nov 26 21:12 log.47556137._006688.job.log.1
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas       353 Nov 26 21:12 output.list
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 21:12 boinc_mmap_file
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas       620 Nov 26 21:12 runtime_log
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas  23971840 Nov 26 21:12 result.tar.gz
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas       665 Nov 26 21:12 SyuMDmC1Kh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmykKKDmPpd7Pm.diag
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas      9339 Nov 26 21:12 runtime_log.err
[2025-11-26 21:12:39] -rw-r--r--. 1 boincer umatlas     21579 Nov 26 21:12 stderr.txt
[2025-11-26 21:12:39] HITS file was successfully produced:
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas 902800089 Nov 26 21:09 shared/HITS.pool.root.1
[2025-11-26 21:12:39]  *** Contents of shared directory: ***
[2025-11-26 21:12:39] total 1305340
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas 409269762 Nov 25 00:04 ATLAS.root_0
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 25 00:04 start_atlas.sh
[2025-11-26 21:12:39] -rw-r--r--. 2 boincer umatlas    590099 Nov 25 00:04 input.tar.gz
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas 902800089 Nov 26 21:09 HITS.pool.root.1
[2025-11-26 21:12:39] -rw-------. 1 boincer umatlas  23971840 Nov 26 21:12 result.tar.gz
21:13:01 (1598954): run_atlas exited; CPU time 526520.434096
21:13:01 (1598954): called boinc_finish(0)

</stderr_txt>
]]>

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