Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:30 (1691523): wrapper (7.7.26015): starting
07:11:30 (1691523): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 07:11:30] Arguments: --nthreads 9
[2025-11-24 07:11:30] Threads: 9
[2025-11-24 07:11:30] Checking for CVMFS
[2025-11-24 07:11:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:11:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:11:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:11:32] 2.13.3.0 5308 5539 208516 153245 0 165 24578746 32935937 12857 16776704 0 13227308 99.493 20843301 39112 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 07:11:32] CVMFS is ok
[2025-11-24 07:11:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:11:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:11:32] Further information can be found at the LHC@home message board.
[2025-11-24 07:11:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:11:32] Checking for apptainer binary...
[2025-11-24 07:11:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:11:32] Running /usr/bin/apptainer --version
[2025-11-24 07:11:32] apptainer version 1.4.4-1.el9
[2025-11-24 07:11:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:11:33] c6-1-24-1.aglt2.org
[2025-11-24 07:11:33] apptainer works
[2025-11-24 07:11:33] Set ATHENA_PROC_NUMBER=9
[2025-11-24 07:11:33] Set ATHENA_CORE_NUMBER=9
[2025-11-24 07:11:33] Starting ATLAS job with PandaID=6895355577
[2025-11-24 07:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 13:58:48]  *** The last 200 lines of the pilot log: ***
[2025-11-25 13:58:48] 2025-11-25 18:58:13,360 | INFO     | time since job start (110749s) is within the limit (172800.0s)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,327 | INFO     | monitor loop #6893: job 0:6895355577 is in state 'finished'
[2025-11-25 13:58:48] 2025-11-25 18:58:14,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,511 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 13:58:48] 2025-11-25 18:58:14,515 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3094.4228035714286
[2025-11-25 13:58:48] 2025-11-25 18:58:14,523 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895355577/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,524 | INFO     | extracted standard info from prmon json
[2025-11-25 13:58:48] 2025-11-25 18:58:14,524 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 13:58:48] 2025-11-25 18:58:14,524 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 13:58:48] 2025-11-25 18:58:14,547 | INFO     | fitting pss+swap vs Time
[2025-11-25 13:58:48] 2025-11-25 18:58:14,549 | INFO     | sum of square deviations: 1850909875992.0435
[2025-11-25 13:58:48] 2025-11-25 18:58:14,599 | INFO     | sum of deviations: 10435956732377.615
[2025-11-25 13:58:48] 2025-11-25 18:58:14,600 | INFO     | mean x: 1764041766.2635062
[2025-11-25 13:58:48] 2025-11-25 18:58:14,600 | INFO     | mean y: 3094088.4233737597
[2025-11-25 13:58:48] 2025-11-25 18:58:14,600 | INFO     | intersect: -9943075514.764845
[2025-11-25 13:58:48] 2025-11-25 18:58:14,602 | INFO     | chi2: 14.771207895173495
[2025-11-25 13:58:48] 2025-11-25 18:58:14,604 | INFO     | sum of square deviations: 1835647616653.9514
[2025-11-25 13:58:48] 2025-11-25 18:58:14,653 | INFO     | sum of deviations: 11057216353558.133
[2025-11-25 13:58:48] 2025-11-25 18:58:14,653 | INFO     | mean x: 1764041613.7683804
[2025-11-25 13:58:48] 2025-11-25 18:58:14,653 | INFO     | mean y: 3100293.8761746823
[2025-11-25 13:58:48] 2025-11-25 18:58:14,654 | INFO     | intersect: -10622789775.194685
[2025-11-25 13:58:48] 2025-11-25 18:58:14,655 | INFO     | chi2: 11.80277655588735
[2025-11-25 13:58:48] 2025-11-25 18:58:14,655 | INFO     | current chi2=11.80277655588735 (change=20.096063641864266 %)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,655 | INFO     | right removable region: 1808
[2025-11-25 13:58:48] 2025-11-25 18:58:14,657 | INFO     | sum of square deviations: 1835645665263.9526
[2025-11-25 13:58:48] 2025-11-25 18:58:14,707 | INFO     | sum of deviations: 9622753499249.07
[2025-11-25 13:58:48] 2025-11-25 18:58:14,707 | INFO     | mean x: 1764041918.7683804
[2025-11-25 13:58:48] 2025-11-25 18:58:14,707 | INFO     | mean y: 3102212.599226092
[2025-11-25 13:58:48] 2025-11-25 18:58:14,707 | INFO     | intersect: -9244292787.355518
[2025-11-25 13:58:48] 2025-11-25 18:58:14,709 | INFO     | chi2: 10.214902008233267
[2025-11-25 13:58:48] 2025-11-25 18:58:14,709 | INFO     | current chi2=10.214902008233267 (change=30.845858505782758 %)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,711 | INFO     | sum of square deviations: 1820465595648.2722
[2025-11-25 13:58:48] 2025-11-25 18:58:14,751 | INFO     | sum of deviations: 8924598034197.305
[2025-11-25 13:58:48] 2025-11-25 18:58:14,752 | INFO     | mean x: 1764042071.2732816
[2025-11-25 13:58:48] 2025-11-25 18:58:14,752 | INFO     | mean y: 3109226.5166297117
[2025-11-25 13:58:48] 2025-11-25 18:58:14,752 | INFO     | intersect: -8644879749.029276
[2025-11-25 13:58:48] 2025-11-25 18:58:14,753 | INFO     | chi2: 7.00419458791858
[2025-11-25 13:58:48] 2025-11-25 18:58:14,753 | INFO     | current chi2=7.00419458791858 (change=31.43160274789557 %)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,754 | INFO     | sum of square deviations: 1805369434582.5098
[2025-11-25 13:58:48] 2025-11-25 18:58:14,792 | INFO     | sum of deviations: 8403591791238.17
[2025-11-25 13:58:48] 2025-11-25 18:58:14,792 | INFO     | mean x: 1764042223.7782102
[2025-11-25 13:58:48] 2025-11-25 18:58:14,792 | INFO     | mean y: 3114489.2234574766
[2025-11-25 13:58:48] 2025-11-25 18:58:14,792 | INFO     | intersect: -8208108359.228167
[2025-11-25 13:58:48] 2025-11-25 18:58:14,794 | INFO     | chi2: 5.358683169984424
[2025-11-25 13:58:48] 2025-11-25 18:58:14,794 | INFO     | current chi2=5.358683169984424 (change=23.49322819746429 %)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,794 | INFO     | left removable region: 30
[2025-11-25 13:58:48] 2025-11-25 18:58:14,796 | INFO     | sum of square deviations: 1742880681082.2517
[2025-11-25 13:58:48] 2025-11-25 18:58:14,841 | INFO     | sum of deviations: 8396642885952.219
[2025-11-25 13:58:48] 2025-11-25 18:58:14,841 | INFO     | mean x: 1764042498.2902138
[2025-11-25 13:58:48] 2025-11-25 18:58:14,841 | INFO     | mean y: 3127489.3115860517
[2025-11-25 13:58:48] 2025-11-25 18:58:14,841 | INFO     | intersect: -8495466278.21373
[2025-11-25 13:58:48] 2025-11-25 18:58:14,843 | INFO     | chi2: 1.6374957720612924
[2025-11-25 13:58:48] 2025-11-25 18:58:14,843 | INFO     | current memory leak: 4.82 B/s (using 1778 data points, chi2=1.64)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,844 | INFO     | could have reported an average CPU frequency of 2962 MHz (64 samples)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | ..............................
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . Timing measurements:
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . get job = 0 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . initial setup = 6 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . payload setup = 34 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . stage-in = 0 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . payload execution = 110637 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . stage-out = 3 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | . log creation = 1 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,845 | INFO     | ..............................
[2025-11-25 13:58:48] 2025-11-25 18:58:14,938 | INFO     | 
[2025-11-25 13:58:48] 2025-11-25 18:58:14,938 | INFO     | job summary report
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | --------------------------------------------------
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | PanDA job id: 6895355577
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | task id: 47556137
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | errors: (none)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | pilot state: finished 
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | transexitcode: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | exeerrorcode: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | exeerrordiag: 
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | exitcode: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | exitmsg: OK
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | cpuconsumptiontime: 250346 s
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | nevents: 1000
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | neventsw: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | pid: 1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | pgrp: 1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | corecount: 9
[2025-11-25 13:58:48] 2025-11-25 18:58:14,939 | INFO     | event service: False
[2025-11-25 13:58:48] 2025-11-25 18:58:14,940 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 23: 2284315, 32: 2284605, 34: 2284633, 110676: 2360611, 110679: 2369610, 110681: 2369666, 110690: 2369912}
[2025-11-25 13:58:48] 2025-11-25 18:58:14,940 | INFO     | --------------------------------------------------
[2025-11-25 13:58:48] 2025-11-25 18:58:14,940 | INFO     | 
[2025-11-25 13:58:48] 2025-11-25 18:58:14,940 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 13:58:48] 2025-11-25 18:58:14,954 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,955 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | job 6895355577 has completed (purged errors)
[2025-11-25 13:58:48] 2025-11-25 18:58:14,956 | INFO     | overall cleanup function is called
[2025-11-25 13:58:48] 2025-11-25 18:58:15,972 | INFO     | --- collectZombieJob: --- 10, [1751697]
[2025-11-25 13:58:48] 2025-11-25 18:58:15,972 | INFO     | zombie collector waiting for pid 1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:15,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 13:58:48] 2025-11-25 18:58:15,972 | INFO     | collected zombie processes
[2025-11-25 13:58:48] 2025-11-25 18:58:15,972 | INFO     | will attempt to kill all subprocesses of pid=1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:16,324 | INFO     | process IDs to be killed: [1751697] (in reverse order)
[2025-11-25 13:58:48] 2025-11-25 18:58:16,458 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 13:58:48] 2025-11-25 18:58:16,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 13:58:48] 2025-11-25 18:58:16,491 | INFO     | did not find any defunct processes belonging to 1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:16,529 | INFO     | did not find any defunct processes belonging to 1751697
[2025-11-25 13:58:48] 2025-11-25 18:58:16,530 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 13:58:48] 2025-11-25 18:58:16,530 | INFO     | ready for new job
[2025-11-25 13:58:48] 2025-11-25 18:58:16,530 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 13:58:48] 2025-11-25 18:58:16,537 | INFO     | ***************************************
[2025-11-25 13:58:48] 2025-11-25 18:58:16,537 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 13:58:48] 2025-11-25 18:58:16,537 | INFO     | ***************************************
[2025-11-25 13:58:48] 2025-11-25 18:58:16,537 | INFO     | 
[2025-11-25 13:58:48] 2025-11-25 18:58:16,540 | INFO     | architecture information:
[2025-11-25 13:58:48] 2025-11-25 18:58:16,541 | INFO     | executing command: cat /etc/os-release
[2025-11-25 13:58:48] 2025-11-25 18:58:16,559 | INFO     | cat /etc/os-release:
[2025-11-25 13:58:48] NAME="CentOS Linux"
[2025-11-25 13:58:48] VERSION="7 (Core)"
[2025-11-25 13:58:48] ID="centos"
[2025-11-25 13:58:48] ID_LIKE="rhel fedora"
[2025-11-25 13:58:48] VERSION_ID="7"
[2025-11-25 13:58:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 13:58:48] ANSI_COLOR="0;31"
[2025-11-25 13:58:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 13:58:48] HOME_URL="https://www.centos.org/"
[2025-11-25 13:58:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 13:58:48] 
[2025-11-25 13:58:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 13:58:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 13:58:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 13:58:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 13:58:48] 
[2025-11-25 13:58:48] 2025-11-25 18:58:16,560 | INFO     | ***************************************
[2025-11-25 13:58:48] 2025-11-25 18:58:17,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 13:58:48] 2025-11-25 18:58:17,079 | INFO     | sufficient remaining disk space (71547486208 B)
[2025-11-25 13:58:48] 2025-11-25 18:58:17,079 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 13:58:48] 2025-11-25 18:58:17,079 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 13:58:48] 2025-11-25 18:58:17,079 | INFO     | update_server=False
[2025-11-25 13:58:48] 2025-11-25 18:58:17,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 13:58:48] 2025-11-25 18:58:17,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 13:58:48] 2025-11-25 18:58:17,271 | INFO     | all data control threads have been joined
[2025-11-25 13:58:48] 2025-11-25 18:58:17,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 13:58:48] 2025-11-25 18:58:17,510 | INFO     | all payload control threads have been joined
[2025-11-25 13:58:48] 2025-11-25 18:58:17,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:58:48] 2025-11-25 18:58:17,837 | INFO     | aborting loop
[2025-11-25 13:58:48] 2025-11-25 18:58:18,084 | INFO     | [job] retrieve thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,108 | INFO     | all job control threads have been joined
[2025-11-25 13:58:48] 2025-11-25 18:58:18,210 | INFO     | [job] validate thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,262 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,276 | INFO     | [data] control thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,515 | INFO     | [payload] control thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,735 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,825 | INFO     | [data] copytool_in thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:18,842 | INFO     | [job] job monitor thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,114 | INFO     | [job] control thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,130 | INFO     | [payload] failed_post thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,158 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,380 | INFO     | [data] copytool_out thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,511 | INFO     | [payload] validate_post thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:19,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 13:58:48] 2025-11-25 18:58:20,955 | INFO     | [job] queue monitor thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:21,103 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 13:58:48] 2025-11-25 18:58:41,973 | INFO     | [monitor] cgroup control has ended
[2025-11-25 13:58:48] 2025-11-25 18:58:43,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371558016832)>', '<ExcThread(monitor, started 140370914559744)>']
[2025-11-25 13:58:48] 2025-11-25 18:58:46,899 | INFO     | PID=1711682 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 13:58:48] 2025-11-25 18:58:46,899 | INFO     | .. there are 31 such processes running
[2025-11-25 13:58:48] 2025-11-25 18:58:46,900 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 13:58:48] 2025-11-25 18:58:46,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 13:58:48] 2025-11-25 18:58:46,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 13:58:48] 2025-11-25 18:58:46,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 13:58:48] 2025-11-25 18:58:46,900 | INFO     | [monitor] control thread has ended
[2025-11-25 13:58:48] 2025-11-25 18:58:48,039 | INFO     | all workflow threads have been joined
[2025-11-25 13:58:48] 2025-11-25 18:58:48,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 13:58:48] 2025-11-25 18:58:48,039 | INFO     | traces error code: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:48,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 13:58:48] 2025-11-25 18:58:48,257 [wrapper] ==== pilot stdout END ====
[2025-11-25 13:58:48] 2025-11-25 18:58:48,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 13:58:48] 2025-11-25 18:58:48,264 [wrapper] pilotpid: 1711682
[2025-11-25 13:58:48] 2025-11-25 18:58:48,268 [wrapper] Pilot exit status: 0
[2025-11-25 13:58:48] 2025-11-25 18:58:48,279 [wrapper] pandaids: 6895355577
[2025-11-25 13:58:48] 2025-11-25 18:58:48,358 [wrapper] cleanup supervisor_pilot 3091611 1711683
[2025-11-25 13:58:48] 2025-11-25 18:58:48,361 [wrapper] Test setup, not cleaning
[2025-11-25 13:58:48] 2025-11-25 18:58:48,364 [wrapper] apfmon messages muted
[2025-11-25 13:58:48] 2025-11-25 18:58:48,366 [wrapper] ==== wrapper stdout END ====
[2025-11-25 13:58:48] 2025-11-25 18:58:48,369 [wrapper] ==== wrapper stderr END ====
[2025-11-25 13:58:48]  *** Error codes and diagnostics ***
[2025-11-25 13:58:48]     "exeErrorCode": 0,
[2025-11-25 13:58:48]     "exeErrorDiag": "",
[2025-11-25 13:58:48]     "pilotErrorCode": 0,
[2025-11-25 13:58:48]     "pilotErrorDiag": "",
[2025-11-25 13:58:48]  *** Listing of results directory ***
[2025-11-25 13:58:48] total 1333516
[2025-11-25 13:58:48] -rwx------. 1 boincer umatlas     36292 Nov 23 03:03 runpilot2-wrapper.sh
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 03:03 queuedata.json
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 03:03 pilot3.tar.gz
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas       100 Nov 24 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 13:58:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 07:11 run_atlas
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas       105 Nov 24 07:11 job.xml
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas 409852434 Nov 24 07:11 EVNT.47483658._000667.pool.root.1
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 07:11 start_atlas.sh
[2025-11-25 13:58:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 07:11 shared
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas    590086 Nov 24 07:11 input.tar.gz
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas         0 Nov 24 07:11 boinc_lockfile
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 07:11 pandaJob.out
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas        57 Nov 24 07:11 setup.sh.local
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas    989803 Nov 24 07:12 agis_schedconf.cvmfs.json
[2025-11-25 13:58:48] drwx------. 5 boincer umatlas      4096 Nov 24 07:12 pilot3
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas       533 Nov 25 13:50 boinc_task_state.xml
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas 917469396 Nov 25 13:57 HITS.47556137._006629.pool.root.1
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas      6842 Nov 25 13:57 init_data.xml
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas      1057 Nov 25 13:57 memory_monitor_summary.json
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas   1516240 Nov 25 13:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas   2876295 Nov 25 13:58 log.47556137._006629.job.log.tgz.1
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas      8618 Nov 25 13:58 heartbeat.json
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas        29 Nov 25 13:58 wrapper_checkpoint.txt
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 13:58 boinc_mmap_file
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas        95 Nov 25 13:58 pilot_heartbeat.json
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas      4824 Nov 25 13:58 pilotlog.txt
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas  14261516 Nov 25 13:58 log.47556137._006629.job.log.1
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas       353 Nov 25 13:58 output.list
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas       620 Nov 25 13:58 runtime_log
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas  17162240 Nov 25 13:58 result.tar.gz
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas      9349 Nov 25 13:58 runtime_log.err
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas       665 Nov 25 13:58 bJrLDm9EKh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1jKKDmqqYL7n.diag
[2025-11-25 13:58:48] -rw-r--r--. 1 boincer umatlas     21375 Nov 25 13:58 stderr.txt
[2025-11-25 13:58:48] HITS file was successfully produced:
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas 917469396 Nov 25 13:57 shared/HITS.pool.root.1
[2025-11-25 13:58:48]  *** Contents of shared directory: ***
[2025-11-25 13:58:48] total 1313580
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas 409852434 Nov 24 07:11 ATLAS.root_0
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 07:11 start_atlas.sh
[2025-11-25 13:58:48] -rw-r--r--. 2 boincer umatlas    590086 Nov 24 07:11 input.tar.gz
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas 917469396 Nov 25 13:57 HITS.pool.root.1
[2025-11-25 13:58:48] -rw-------. 1 boincer umatlas  17162240 Nov 25 13:58 result.tar.gz
13:59:10 (1691523): run_atlas exited; CPU time 252685.450632
13:59:10 (1691523): called boinc_finish(0)

</stderr_txt>
]]>

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