Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:40:25 (14171): wrapper (7.7.26015): starting
22:40:25 (14171): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 22:40:25] Arguments: --nthreads 8
[2025-11-23 22:40:25] Threads: 8
[2025-11-23 22:40:25] Checking for CVMFS
[2025-11-23 22:40:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:40:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:40:25] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:40:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:40:25] 2.11.2.0 8539 114307 146724 153231 1 82 13981112 18432000 1885 130560 0 85738927 99.974 4756025 31529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 22:40:25] CVMFS is ok
[2025-11-23 22:40:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:40:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 22:40:25] Further information can be found at the LHC@home message board.
[2025-11-23 22:40:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:40:25] Checking for apptainer binary...
[2025-11-23 22:40:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:40:25] Running /usr/bin/apptainer --version
[2025-11-23 22:40:25] apptainer version 1.3.2-1.el7
[2025-11-23 22:40:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:40:26] c-206-1.aglt2.org
[2025-11-23 22:40:26] apptainer works
[2025-11-23 22:40:26] Set ATHENA_PROC_NUMBER=8
[2025-11-23 22:40:26] Set ATHENA_CORE_NUMBER=8
[2025-11-23 22:40:26] Starting ATLAS job with PandaID=6895350462
[2025-11-23 22:40:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:11:42 (20391): wrapper (7.7.26015): starting
02:11:42 (20391): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:11:42] Arguments: --nthreads 8
[2025-11-24 02:11:42] Threads: 8
[2025-11-24 02:11:42] This job has been restarted, cleaning up previous attempt
[2025-11-24 02:11:42] Checking for CVMFS
[2025-11-24 02:11:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:11:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:11:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:11:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:11:43] 2.11.2.0 8539 114518 145280 153236 2 56 14009492 18432000 1 130560 0 86103739 99.974 4764030 31526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 02:11:43] CVMFS is ok
[2025-11-24 02:11:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:11:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:11:43] Further information can be found at the LHC@home message board.
[2025-11-24 02:11:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:11:43] Checking for apptainer binary...
[2025-11-24 02:11:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:11:43] Running /usr/bin/apptainer --version
[2025-11-24 02:11:43] apptainer version 1.3.2-1.el7
[2025-11-24 02:11:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:11:44] c-206-1.aglt2.org
[2025-11-24 02:11:44] apptainer works
[2025-11-24 02:11:44] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:11:44] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:11:44] Starting ATLAS job with PandaID=6895350462
[2025-11-24 02:11:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 21:55:01]  *** The last 200 lines of the pilot log: ***
[2025-11-24 21:55:01] 2025-11-25 02:54:39,342 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 21:55:01] 2025-11-25 02:54:39,348 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2489.0
[2025-11-24 21:55:01] 2025-11-25 02:54:39,352 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895350462/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,353 | INFO     | extracted standard info from prmon json
[2025-11-24 21:55:01] 2025-11-25 02:54:39,354 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 21:55:01] 2025-11-25 02:54:39,354 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 21:55:01] 2025-11-25 02:54:39,384 | INFO     | fitting pss+swap vs Time
[2025-11-24 21:55:01] 2025-11-25 02:54:39,386 | INFO     | sum of square deviations: 487770788050.4271
[2025-11-24 21:55:01] 2025-11-25 02:54:39,430 | INFO     | sum of deviations: 2538023395408.204
[2025-11-24 21:55:01] 2025-11-25 02:54:39,431 | INFO     | mean x: 1764003784.7755804
[2025-11-24 21:55:01] 2025-11-25 02:54:39,431 | INFO     | mean y: 2900572.908856406
[2025-11-24 21:55:01] 2025-11-25 02:54:39,431 | INFO     | intersect: -9175760767.68415
[2025-11-24 21:55:01] 2025-11-25 02:54:39,433 | INFO     | chi2: 5.7278887804530765
[2025-11-24 21:55:01] 2025-11-25 02:54:39,434 | INFO     | sum of square deviations: 481506936404.90546
[2025-11-24 21:55:01] 2025-11-25 02:54:39,478 | INFO     | sum of deviations: 2895259231021.7847
[2025-11-24 21:55:01] 2025-11-25 02:54:39,478 | INFO     | mean x: 1764003632.2789292
[2025-11-24 21:55:01] 2025-11-25 02:54:39,478 | INFO     | mean y: 2909267.573402418
[2025-11-24 21:55:01] 2025-11-25 02:54:39,479 | INFO     | intersect: -10603890788.193138
[2025-11-24 21:55:01] 2025-11-25 02:54:39,480 | INFO     | chi2: 3.030409627324195
[2025-11-24 21:55:01] 2025-11-25 02:54:39,480 | INFO     | current chi2=3.030409627324195 (change=47.09377672161279 %)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,482 | INFO     | sum of square deviations: 475296946234.3593
[2025-11-24 21:55:01] 2025-11-25 02:54:39,526 | INFO     | sum of deviations: 3034203605324.241
[2025-11-24 21:55:01] 2025-11-25 02:54:39,527 | INFO     | mean x: 1764003479.782307
[2025-11-24 21:55:01] 2025-11-25 02:54:39,527 | INFO     | mean y: 2912676.2081526453
[2025-11-24 21:55:01] 2025-11-25 02:54:39,527 | INFO     | intersect: -11258143723.512222
[2025-11-24 21:55:01] 2025-11-25 02:54:39,529 | INFO     | chi2: 2.453671325952049
[2025-11-24 21:55:01] 2025-11-25 02:54:39,529 | INFO     | current chi2=2.453671325952049 (change=19.031694467041312 %)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,529 | INFO     | right removable region: 1152
[2025-11-24 21:55:01] 2025-11-25 02:54:39,531 | INFO     | sum of square deviations: 481506456884.46295
[2025-11-24 21:55:01] 2025-11-25 02:54:39,573 | INFO     | sum of deviations: 2248354660347.6074
[2025-11-24 21:55:01] 2025-11-25 02:54:39,574 | INFO     | mean x: 1764003937.2780657
[2025-11-24 21:55:01] 2025-11-25 02:54:39,574 | INFO     | mean y: 2907615.5043177893
[2025-11-24 21:55:01] 2025-11-25 02:54:39,574 | INFO     | intersect: -8233963181.437728
[2025-11-24 21:55:01] 2025-11-25 02:54:39,576 | INFO     | chi2: 3.767023636624634
[2025-11-24 21:55:01] 2025-11-25 02:54:39,576 | INFO     | current chi2=3.767023636624634 (change=34.23364557147246 %)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,578 | INFO     | sum of square deviations: 475296058076.04193
[2025-11-24 21:55:01] 2025-11-25 02:54:39,621 | INFO     | sum of deviations: 2153451909170.1616
[2025-11-24 21:55:01] 2025-11-25 02:54:39,622 | INFO     | mean x: 1764004089.779705
[2025-11-24 21:55:01] 2025-11-25 02:54:39,622 | INFO     | mean y: 2909945.5281873373
[2025-11-24 21:55:01] 2025-11-25 02:54:39,622 | INFO     | intersect: -7989367521.061554
[2025-11-24 21:55:01] 2025-11-25 02:54:39,624 | INFO     | chi2: 3.680870792297207
[2025-11-24 21:55:01] 2025-11-25 02:54:39,624 | INFO     | current chi2=3.680870792297207 (change=2.2870269113740522 %)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,624 | INFO     | left removable region: 20
[2025-11-24 21:55:01] 2025-11-25 02:54:39,626 | INFO     | sum of square deviations: 449796614198.8362
[2025-11-24 21:55:01] 2025-11-25 02:54:39,668 | INFO     | sum of deviations: 2521384789152.739
[2025-11-24 21:55:01] 2025-11-25 02:54:39,668 | INFO     | mean x: 1764004059.2853358
[2025-11-24 21:55:01] 2025-11-25 02:54:39,668 | INFO     | mean y: 2926209.7128975266
[2025-11-24 21:55:01] 2025-11-25 02:54:39,669 | INFO     | intersect: -9885394117.037218
[2025-11-24 21:55:01] 2025-11-25 02:54:39,670 | INFO     | chi2: 0.2958192517755346
[2025-11-24 21:55:01] 2025-11-25 02:54:39,670 | INFO     | current memory leak: 5.61 B/s (using 1132 data points, chi2=0.30)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,672 | INFO     | could have reported an average CPU frequency of 2582 MHz (42 samples)
[2025-11-24 21:55:01] 2025-11-25 02:54:39,672 | INFO     | ..............................
[2025-11-24 21:55:01] 2025-11-25 02:54:39,672 | INFO     | . Timing measurements:
[2025-11-24 21:55:01] 2025-11-25 02:54:39,672 | INFO     | . get job = 0 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,672 | INFO     | . initial setup = 2 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | . payload setup = 5 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | . stage-in = 0 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | . payload execution = 70925 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | . stage-out = 4 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | . log creation = 0 s
[2025-11-24 21:55:01] 2025-11-25 02:54:39,673 | INFO     | ..............................
[2025-11-24 21:55:01] 2025-11-25 02:54:39,786 | INFO     | time since job start (70962s) is within the limit (172800.0s)
[2025-11-24 21:55:01] 2025-11-25 02:54:40,049 | INFO     | 
[2025-11-24 21:55:01] 2025-11-25 02:54:40,049 | INFO     | job summary report
[2025-11-24 21:55:01] 2025-11-25 02:54:40,049 | INFO     | --------------------------------------------------
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | PanDA job id: 6895350462
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | task id: 47556137
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | errors: (none)
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | pilot state: finished 
[2025-11-24 21:55:01] 2025-11-25 02:54:40,050 | INFO     | transexitcode: 0
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | exeerrorcode: 0
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | exeerrordiag: 
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | exitcode: 0
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | exitmsg: OK
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | cpuconsumptiontime: 545954 s
[2025-11-24 21:55:01] 2025-11-25 02:54:40,051 | INFO     | nevents: 1000
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | neventsw: 0
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | pid: 20134
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | pgrp: 20134
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | corecount: 8
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | event service: False
[2025-11-24 21:55:01] 2025-11-25 02:54:40,052 | INFO     | sizes: {0: 2298755, 1: 2298755, 5: 2299045, 11: 2299101, 70935: 2355982, 70939: 2365767, 70942: 2365951, 70947: 2366197}
[2025-11-24 21:55:01] 2025-11-25 02:54:40,053 | INFO     | --------------------------------------------------
[2025-11-24 21:55:01] 2025-11-25 02:54:40,053 | INFO     | 
[2025-11-24 21:55:01] 2025-11-25 02:54:40,053 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 21:55:01] 2025-11-25 02:54:40,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 21:55:01] 2025-11-25 02:54:40,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 21:55:01] 2025-11-25 02:54:40,075 | INFO     | job 6895350462 has completed (purged errors)
[2025-11-24 21:55:01] 2025-11-25 02:54:40,075 | INFO     | overall cleanup function is called
[2025-11-24 21:55:01] 2025-11-25 02:54:40,944 | INFO     | PID=32272 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 21:55:01] 2025-11-25 02:54:40,944 | INFO     | .. there are 3 such processes running
[2025-11-24 21:55:01] 2025-11-25 02:54:41,092 | INFO     | --- collectZombieJob: --- 10, [20134]
[2025-11-24 21:55:01] 2025-11-25 02:54:41,092 | INFO     | zombie collector waiting for pid 20134
[2025-11-24 21:55:01] 2025-11-25 02:54:41,092 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 21:55:01] 2025-11-25 02:54:41,093 | INFO     | collected zombie processes
[2025-11-24 21:55:01] 2025-11-25 02:54:41,093 | INFO     | will attempt to kill all subprocesses of pid=20134
[2025-11-24 21:55:01] 2025-11-25 02:54:41,268 | INFO     | process IDs to be killed: [20134] (in reverse order)
[2025-11-24 21:55:01] 2025-11-25 02:54:41,324 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 21:55:01] 2025-11-25 02:54:41,325 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 21:55:01] 2025-11-25 02:54:41,330 | INFO     | did not find any defunct processes belonging to 20134
[2025-11-24 21:55:01] 2025-11-25 02:54:41,334 | INFO     | did not find any defunct processes belonging to 20134
[2025-11-24 21:55:01] 2025-11-25 02:54:41,335 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 21:55:01] 2025-11-25 02:54:41,336 | INFO     | ready for new job
[2025-11-24 21:55:01] 2025-11-25 02:54:41,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 21:55:01] 2025-11-25 02:54:41,339 | INFO     | ***************************************
[2025-11-24 21:55:01] 2025-11-25 02:54:41,339 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 21:55:01] 2025-11-25 02:54:41,339 | INFO     | ***************************************
[2025-11-24 21:55:01] 2025-11-25 02:54:41,339 | INFO     | 
[2025-11-24 21:55:01] 2025-11-25 02:54:41,340 | INFO     | architecture information:
[2025-11-24 21:55:01] 2025-11-25 02:54:41,341 | INFO     | executing command: cat /etc/os-release
[2025-11-24 21:55:01] 2025-11-25 02:54:41,353 | INFO     | cat /etc/os-release:
[2025-11-24 21:55:01] NAME="CentOS Linux"
[2025-11-24 21:55:01] VERSION="7 (Core)"
[2025-11-24 21:55:01] ID="centos"
[2025-11-24 21:55:01] ID_LIKE="rhel fedora"
[2025-11-24 21:55:01] VERSION_ID="7"
[2025-11-24 21:55:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 21:55:01] ANSI_COLOR="0;31"
[2025-11-24 21:55:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 21:55:01] HOME_URL="https://www.centos.org/"
[2025-11-24 21:55:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 21:55:01] 
[2025-11-24 21:55:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 21:55:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 21:55:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 21:55:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 21:55:01] 
[2025-11-24 21:55:01] 2025-11-25 02:54:41,353 | INFO     | ***************************************
[2025-11-24 21:55:01] 2025-11-25 02:54:41,856 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 21:55:01] 2025-11-25 02:54:41,872 | INFO     | sufficient remaining disk space (26660044800 B)
[2025-11-24 21:55:01] 2025-11-25 02:54:41,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 21:55:01] 2025-11-25 02:54:41,872 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 21:55:01] 2025-11-25 02:54:41,873 | INFO     | update_server=False
[2025-11-24 21:55:01] 2025-11-25 02:54:41,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 21:55:01] 2025-11-25 02:54:41,873 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 21:55:01] 2025-11-25 02:54:41,873 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 21:55:01] 2025-11-25 02:54:41,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 21:55:01] 2025-11-25 02:54:41,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 21:55:01] 2025-11-25 02:54:42,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:55:01] 2025-11-25 02:54:42,203 | INFO     | aborting loop
[2025-11-24 21:55:01] 2025-11-25 02:54:42,226 | INFO     | all data control threads have been joined
[2025-11-24 21:55:01] 2025-11-25 02:54:42,237 | INFO     | all job control threads have been joined
[2025-11-24 21:55:01] 2025-11-25 02:54:42,338 | INFO     | all payload control threads have been joined
[2025-11-24 21:55:01] 2025-11-25 02:54:42,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 21:55:01] 2025-11-25 02:54:42,878 | INFO     | [job] retrieve thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,209 | INFO     | [job] job monitor thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,232 | INFO     | [data] control thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,238 | INFO     | [payload] validate_post thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,239 | INFO     | [job] control thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,342 | INFO     | [payload] control thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,442 | INFO     | [job] validate thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,652 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,696 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,822 | INFO     | [payload] failed_post thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,941 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:43,942 | INFO     | [data] copytool_in thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:44,491 | INFO     | [data] copytool_out thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:44,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 21:55:01] 2025-11-25 02:54:45,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 21:55:01] 2025-11-25 02:54:45,853 | INFO     | [job] queue monitor thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:49,228 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:52,280 | INFO     | job.realtimelogging is not enabled
[2025-11-24 21:55:01] 2025-11-25 02:54:53,286 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 21:55:01] 2025-11-25 02:54:54,947 | INFO     | [monitor] cgroup control has ended
[2025-11-24 21:55:01] 2025-11-25 02:54:56,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599108515648)>', '<ExcThread(monitor, started 140598665258752)>']
[2025-11-24 21:55:01] 2025-11-25 02:54:56,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 21:55:01] 2025-11-25 02:54:56,951 | INFO     | [monitor] control thread has ended
[2025-11-24 21:55:01] 2025-11-25 02:55:01,405 | INFO     | all workflow threads have been joined
[2025-11-24 21:55:01] 2025-11-25 02:55:01,405 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 21:55:01] 2025-11-25 02:55:01,406 | INFO     | traces error code: 0
[2025-11-24 21:55:01] 2025-11-25 02:55:01,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 21:55:01] 2025-11-25 02:55:01,533 [wrapper] ==== pilot stdout END ====
[2025-11-24 21:55:01] 2025-11-25 02:55:01,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 21:55:01] 2025-11-25 02:55:01,541 [wrapper] pilotpid: 32272
[2025-11-24 21:55:01] 2025-11-25 02:55:01,544 [wrapper] Pilot exit status: 0
[2025-11-24 21:55:01] 2025-11-25 02:55:01,567 [wrapper] pandaids: 6895350462 6895350462
[2025-11-24 21:55:01] 2025-11-25 02:55:01,609 [wrapper] cleanup supervisor_pilot 14639 32273
[2025-11-24 21:55:01] 2025-11-25 02:55:01,612 [wrapper] Test setup, not cleaning
[2025-11-24 21:55:01] 2025-11-25 02:55:01,618 [wrapper] apfmon messages muted
[2025-11-24 21:55:01] 2025-11-25 02:55:01,621 [wrapper] ==== wrapper stdout END ====
[2025-11-24 21:55:01] 2025-11-25 02:55:01,623 [wrapper] ==== wrapper stderr END ====
[2025-11-24 21:55:01]  *** Error codes and diagnostics ***
[2025-11-24 21:55:01]     "exeErrorCode": 0,
[2025-11-24 21:55:01]     "exeErrorDiag": "",
[2025-11-24 21:55:01]     "pilotErrorCode": 0,
[2025-11-24 21:55:01]     "pilotErrorDiag": "",
[2025-11-24 21:55:01]  *** Listing of results directory ***
[2025-11-24 21:55:01] total 1736184
[2025-11-24 21:55:01] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 16:11 pilot3.tar.gz
[2025-11-24 21:55:01] -rwx------ 1 boincer umatlas     36292 Nov 22 16:14 runpilot2-wrapper.sh
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 16:14 queuedata.json
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas       100 Nov 23 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 21:55:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 22:40 run_atlas
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas       105 Nov 23 22:40 job.xml
[2025-11-24 21:55:01] -rw-r--r-- 3 boincer umatlas 410342431 Nov 23 22:40 EVNT.47483658._000511.pool.root.1
[2025-11-24 21:55:01] -rw-r--r-- 3 boincer umatlas 410342431 Nov 23 22:40 ATLAS.root_0
[2025-11-24 21:55:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 22:40 start_atlas.sh
[2025-11-24 21:55:01] drwxrwx--x 2 boincer umatlas      4096 Nov 23 22:40 shared
[2025-11-24 21:55:01] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 22:40 input.tar.gz
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas         0 Nov 23 22:40 boinc_lockfile
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 02:11 pandaJob.out
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas        57 Nov 24 02:11 setup.sh.local
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas    989786 Nov 24 02:11 agis_schedconf.cvmfs.json
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas       533 Nov 24 21:41 boinc_task_state.xml
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas      5953 Nov 24 21:45 init_data.xml
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas 928937087 Nov 24 21:53 HITS.47556137._005068.pool.root.1
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas      1069 Nov 24 21:54 memory_monitor_summary.json
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas        96 Nov 24 21:54 pilot_heartbeat.json
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas   1516227 Nov 24 21:54 agis_ddmendpoints.agis.ALL.json
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas   2327466 Nov 24 21:54 log.47556137._005068.job.log.tgz.1
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas      8656 Nov 24 21:54 heartbeat.json
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 21:54 boinc_mmap_file
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas        29 Nov 24 21:54 wrapper_checkpoint.txt
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas      4624 Nov 24 21:55 pilotlog.txt
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas   9825358 Nov 24 21:55 log.47556137._005068.job.log.1
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas       353 Nov 24 21:55 output.list
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas       620 Nov 24 21:55 runtime_log
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas  12175360 Nov 24 21:55 result.tar.gz
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas      9423 Nov 24 21:55 runtime_log.err
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas       792 Nov 24 21:55 LCtLDml79g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoIIKDmLQMzYm.diag
[2025-11-24 21:55:01] -rw-r--r-- 1 boincer umatlas     23427 Nov 24 21:55 stderr.txt
[2025-11-24 21:55:01] HITS file was successfully produced:
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas 928937087 Nov 24 21:53 shared/HITS.pool.root.1
[2025-11-24 21:55:01]  *** Contents of shared directory: ***
[2025-11-24 21:55:01] total 1320388
[2025-11-24 21:55:01] -rw-r--r-- 3 boincer umatlas 410342431 Nov 23 22:40 ATLAS.root_0
[2025-11-24 21:55:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 22:40 start_atlas.sh
[2025-11-24 21:55:01] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 22:40 input.tar.gz
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas 928937087 Nov 24 21:53 HITS.pool.root.1
[2025-11-24 21:55:01] -rw------- 1 boincer umatlas  12175360 Nov 24 21:55 result.tar.gz
21:55:03 (20391): run_atlas exited; CPU time 544578.950694
21:55:03 (20391): called boinc_finish(0)

</stderr_txt>
]]>

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