Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:08:52 (1383688): wrapper (7.7.26015): starting
09:08:52 (1383688): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 09:08:52] Arguments: --nthreads 3
[2025-11-24 09:08:52] Threads: 3
[2025-11-24 09:08:52] Checking for CVMFS
[2025-11-24 09:08:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:08:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:08:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:08:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:08:52] 2.9.2.0 154488 503 67488 153238 1 129 34973871 36864000 0 130560 0 3668072 99.999 15723 9088 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 09:08:52] CVMFS is ok
[2025-11-24 09:08:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:08:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:08:52] Further information can be found at the LHC@home message board.
[2025-11-24 09:08:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:08:52] Checking for apptainer binary...
[2025-11-24 09:08:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:08:52] Running /usr/bin/apptainer --version
[2025-11-24 09:08:52] apptainer version 1.4.1-1.1
[2025-11-24 09:08:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:08:52] thA335
[2025-11-24 09:08:52] apptainer works
[2025-11-24 09:08:52] Set ATHENA_PROC_NUMBER=3
[2025-11-24 09:08:52] Set ATHENA_CORE_NUMBER=3
[2025-11-24 09:08:52] Starting ATLAS job with PandaID=6895350286
[2025-11-24 09:08:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:13:11]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:13:11] 2025-11-24 08:12:18,908 | INFO     | ***************************************
[2025-11-24 09:13:11] 2025-11-24 08:12:19,412 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 09:13:11] 2025-11-24 08:12:19,425 | INFO     | sufficient remaining disk space (826350239744 B)
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | INFO     | update_server=False
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:13:11] 2025-11-24 08:12:19,426 | INFO     | aborting loop
[2025-11-24 09:13:11] 2025-11-24 08:12:19,617 | INFO     | all job control threads have been joined
[2025-11-24 09:13:11] 2025-11-24 08:12:20,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:13:11] 2025-11-24 08:12:20,431 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,432 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,432 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,518 | INFO     | all data control threads have been joined
[2025-11-24 09:13:11] 2025-11-24 08:12:20,542 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,622 | INFO     | [job] control thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:20,826 | INFO     | all payload control threads have been joined
[2025-11-24 09:13:11] 2025-11-24 08:12:21,453 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,524 | INFO     | [data] control thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,544 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,666 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,792 | INFO     | [job] validate thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,832 | INFO     | [payload] control thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,884 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:21,933 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:22,253 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:22,494 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:13:11] 2025-11-24 08:12:26,501 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:13:11] 2025-11-24 08:12:49,906 | INFO     | PID=1387420 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 09:13:11] 2025-11-24 08:12:49,906 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:13:11] 2025-11-24 08:12:49,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:13:11] 2025-11-24 08:12:49,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:13:11] 2025-11-24 08:13:05,178 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:13:11] 2025-11-24 08:13:06,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139685349615424)>', '<ExcThread(monitor, started 139684869035776)>']
[2025-11-24 09:13:11] 2025-11-24 08:13:06,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:13:11] 2025-11-24 08:13:06,998 | INFO     | [monitor] control thread has ended
[2025-11-24 09:13:11] 2025-11-24 08:13:11,305 | INFO     | all workflow threads have been joined
[2025-11-24 09:13:11] 2025-11-24 08:13:11,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:13:11] 2025-11-24 08:13:11,306 | INFO     | traces error code: 0
[2025-11-24 09:13:11] 2025-11-24 08:13:11,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:13:11] 2025-11-24 08:13:11,352 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:13:11] 2025-11-24 08:13:11,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:13:11] 2025-11-24 08:13:11,359 [wrapper] pilotpid: 1387420
[2025-11-24 09:13:11] 2025-11-24 08:13:11,362 [wrapper] Pilot exit status: 0
[2025-11-24 09:13:11] 2025-11-24 08:13:11,369 [wrapper] pandaids: 6895350286
[2025-11-24 09:13:11] 2025-11-24 08:13:11,385 [wrapper] cleanup supervisor_pilot 1387426 1387421
[2025-11-24 09:13:11] 2025-11-24 08:13:11,388 [wrapper] Test setup, not cleaning
[2025-11-24 09:13:11] 2025-11-24 08:13:11,390 [wrapper] apfmon messages muted
[2025-11-24 09:13:11] 2025-11-24 08:13:11,393 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:13:11] 2025-11-24 08:13:11,396 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:13:11]  *** Error codes and diagnostics ***
[2025-11-24 09:13:11]     "exeErrorCode": 65,
[2025-11-24 09:13:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 09:13:11]     "pilotErrorCode": 1305,
[2025-11-24 09:13:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 09:13:11]  *** Listing of results directory ***
[2025-11-24 09:13:11] total 405280
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc    576529 Nov 22 21:41 pilot3.tar.gz
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      5112 Nov 22 21:55 queuedata.json
[2025-11-24 09:13:11] -rwx------ 1 boinc boinc     36292 Nov 22 21:55 runpilot2-wrapper.sh
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:13:11] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:08 run_atlas
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:08 job.xml
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc 410810967 Nov 24 09:08 EVNT.47483658._000504.pool.root.1
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc    590102 Nov 24 09:08 input.tar.gz
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:08 start_atlas.sh
[2025-11-24 09:13:11] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:08 shared
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:08 boinc_setup_complete
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      6195 Nov 24 09:08 init_data.xml
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:08 boinc_lockfile
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      2785 Nov 24 09:08 pandaJob.out
[2025-11-24 09:13:11] -rw------- 1 boinc boinc    989786 Nov 24 09:09 agis_schedconf.cvmfs.json
[2025-11-24 09:13:11] -rw------- 1 boinc boinc   1526164 Nov 24 09:09 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:13:11] drwx------ 5 boinc boinc      4096 Nov 24 09:09 pilot3
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc       523 Nov 24 09:09 boinc_task_state.xml
[2025-11-24 09:13:11] -rw------- 1 boinc boinc       947 Nov 24 09:10 memory_monitor_summary.json
[2025-11-24 09:13:11] -rw------- 1 boinc boinc     55680 Nov 24 09:10 log.47556137._004999.job.log.tgz.1
[2025-11-24 09:13:11] -rw------- 1 boinc boinc        95 Nov 24 09:12 pilot_heartbeat.json
[2025-11-24 09:13:11] -rw------- 1 boinc boinc      8404 Nov 24 09:12 heartbeat.json
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      8192 Nov 24 09:13 boinc_mmap_file
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc        23 Nov 24 09:13 wrapper_checkpoint.txt
[2025-11-24 09:13:11] -rw------- 1 boinc boinc      4752 Nov 24 09:13 pilotlog.txt
[2025-11-24 09:13:11] -rw------- 1 boinc boinc     93419 Nov 24 09:13 log.47556137._004999.job.log.1
[2025-11-24 09:13:11] -rw------- 1 boinc boinc       186 Nov 24 09:13 output.list
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc       620 Nov 24 09:13 runtime_log
[2025-11-24 09:13:11] -rw------- 1 boinc boinc    163840 Nov 24 09:13 result.tar.gz
[2025-11-24 09:13:11] -rw------- 1 boinc boinc       649 Nov 24 09:13 wWwLDm0o9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAPKKDmPaZQwm.diag
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      8744 Nov 24 09:13 runtime_log.err
[2025-11-24 09:13:11] -rw-r--r-- 1 boinc boinc      8336 Nov 24 09:13 stderr.txt
[2025-11-24 09:13:11] No HITS result produced
[2025-11-24 09:13:11]  *** Contents of shared directory: ***
[2025-11-24 09:13:11] total 401944
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc 410810967 Nov 24 09:08 ATLAS.root_0
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc    590102 Nov 24 09:08 input.tar.gz
[2025-11-24 09:13:11] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:08 start_atlas.sh
[2025-11-24 09:13:11] -rw------- 1 boinc boinc    163840 Nov 24 09:13 result.tar.gz
09:13:12 (1383688): run_atlas exited; CPU time 31.582885
09:13:12 (1383688): called boinc_finish(0)

</stderr_txt>
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