Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:23:54 (1176051): wrapper (7.7.26015): starting
04:23:54 (1176051): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 04:23:54] Arguments: --nthreads 3
[2025-11-24 04:23:54] Threads: 3
[2025-11-24 04:23:54] Checking for CVMFS
[2025-11-24 04:23:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:23:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:23:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:23:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:23:55] 2.9.2.0 154488 218 61060 153231 2 88 34943548 36864001 0 130560 0 3067527 100.000 6495 4901 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 04:23:55] CVMFS is ok
[2025-11-24 04:23:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:23:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:23:55] Further information can be found at the LHC@home message board.
[2025-11-24 04:23:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:23:55] Checking for apptainer binary...
[2025-11-24 04:23:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:23:55] Running /usr/bin/apptainer --version
[2025-11-24 04:23:55] apptainer version 1.4.1-1.1
[2025-11-24 04:23:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:23:55] thA335
[2025-11-24 04:23:55] apptainer works
[2025-11-24 04:23:55] Set ATHENA_PROC_NUMBER=3
[2025-11-24 04:23:55] Set ATHENA_CORE_NUMBER=3
[2025-11-24 04:23:55] Starting ATLAS job with PandaID=6895355695
[2025-11-24 04:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:28:13]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:28:13] 2025-11-24 03:27:21,763 | INFO     | sufficient remaining disk space (827910520832 B)
[2025-11-24 04:28:13] 2025-11-24 03:27:21,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:28:13] 2025-11-24 03:27:21,763 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:28:13] 2025-11-24 03:27:21,763 | INFO     | update_server=False
[2025-11-24 04:28:13] 2025-11-24 03:27:21,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:28:13] 2025-11-24 03:27:21,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:28:13] 2025-11-24 03:27:21,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:28:13] 2025-11-24 03:27:21,764 | INFO     | aborting loop
[2025-11-24 04:28:13] 2025-11-24 03:27:21,776 | INFO     | all job control threads have been joined
[2025-11-24 04:28:13] 2025-11-24 03:27:22,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:28:13] 2025-11-24 03:27:22,595 | INFO     | all data control threads have been joined
[2025-11-24 04:28:13] 2025-11-24 03:27:22,769 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:22,769 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:22,769 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:22,782 | INFO     | [job] control thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:22,803 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:22,899 | INFO     | all payload control threads have been joined
[2025-11-24 04:28:13] 2025-11-24 03:27:23,102 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,384 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,526 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,601 | INFO     | [data] control thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,873 | INFO     | [job] validate thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,905 | INFO     | [payload] control thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:23,963 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:24,011 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:24,406 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:24,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:28:13] 2025-11-24 03:27:28,586 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:28:13] 2025-11-24 03:27:51,989 | INFO     | PID=1179786 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:28:13] 2025-11-24 03:27:51,989 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:28:13] 2025-11-24 03:27:51,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:28:13] 2025-11-24 03:27:51,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:28:13] 2025-11-24 03:28:07,070 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:28:13] 2025-11-24 03:28:08,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273642837824)>', '<ExcThread(monitor, started 140273019512576)>']
[2025-11-24 04:28:13] 2025-11-24 03:28:09,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:28:13] 2025-11-24 03:28:09,079 | INFO     | [monitor] control thread has ended
[2025-11-24 04:28:13] 2025-11-24 03:28:13,373 | INFO     | all workflow threads have been joined
[2025-11-24 04:28:13] 2025-11-24 03:28:13,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:28:13] 2025-11-24 03:28:13,374 | INFO     | traces error code: 0
[2025-11-24 04:28:13] 2025-11-24 03:28:13,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:28:13] 2025-11-24 03:28:13,420 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:28:13] 2025-11-24 03:28:13,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:28:13] 2025-11-24 03:28:13,426 [wrapper] pilotpid: 1179786
[2025-11-24 04:28:13] 2025-11-24 03:28:13,429 [wrapper] Pilot exit status: 0
[2025-11-24 04:28:13] 2025-11-24 03:28:13,436 [wrapper] pandaids: 6895355695
[2025-11-24 04:28:13] 2025-11-24 03:28:13,453 [wrapper] cleanup supervisor_pilot 1179792 1179787
[2025-11-24 04:28:13] 2025-11-24 03:28:13,456 [wrapper] Test setup, not cleaning
[2025-11-24 04:28:13] 2025-11-24 03:28:13,459 [wrapper] apfmon messages muted
[2025-11-24 04:28:13] 2025-11-24 03:28:13,462 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:28:13] 2025-11-24 03:28:13,464 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:28:13]  *** Error codes and diagnostics ***
[2025-11-24 04:28:13]     "exeErrorCode": 65,
[2025-11-24 04:28:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 04:28:13]     "pilotErrorCode": 1305,
[2025-11-24 04:28:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 04:28:13]  *** Listing of results directory ***
[2025-11-24 04:28:13] total 405628
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc    576529 Nov 23 09:03 pilot3.tar.gz
[2025-11-24 04:28:13] -rwx------ 1 boinc boinc     36292 Nov 23 09:19 runpilot2-wrapper.sh
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      5112 Nov 23 09:19 queuedata.json
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc       100 Nov 24 04:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:28:13] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 04:23 run_atlas
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc       105 Nov 24 04:23 job.xml
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc 411159915 Nov 24 04:23 EVNT.47483658._000670.pool.root.1
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc    590094 Nov 24 04:23 input.tar.gz
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc     15847 Nov 24 04:23 start_atlas.sh
[2025-11-24 04:28:13] drwxrwx--x 2 boinc boinc      4096 Nov 24 04:23 shared
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc         0 Nov 24 04:23 boinc_setup_complete
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      6195 Nov 24 04:23 init_data.xml
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc         0 Nov 24 04:23 boinc_lockfile
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      2785 Nov 24 04:23 pandaJob.out
[2025-11-24 04:28:13] -rw------- 1 boinc boinc    989786 Nov 24 04:24 agis_schedconf.cvmfs.json
[2025-11-24 04:28:13] -rw------- 1 boinc boinc   1526164 Nov 24 04:24 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:28:13] drwx------ 5 boinc boinc      4096 Nov 24 04:24 pilot3
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc       523 Nov 24 04:25 boinc_task_state.xml
[2025-11-24 04:28:13] -rw------- 1 boinc boinc       964 Nov 24 04:25 memory_monitor_summary.json
[2025-11-24 04:28:13] -rw------- 1 boinc boinc     55876 Nov 24 04:25 log.47556137._006658.job.log.tgz.1
[2025-11-24 04:28:13] -rw------- 1 boinc boinc        95 Nov 24 04:27 pilot_heartbeat.json
[2025-11-24 04:28:13] -rw------- 1 boinc boinc      8416 Nov 24 04:27 heartbeat.json
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      8192 Nov 24 04:28 boinc_mmap_file
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc        23 Nov 24 04:28 wrapper_checkpoint.txt
[2025-11-24 04:28:13] -rw------- 1 boinc boinc      4752 Nov 24 04:28 pilotlog.txt
[2025-11-24 04:28:13] -rw------- 1 boinc boinc     93554 Nov 24 04:28 log.47556137._006658.job.log.1
[2025-11-24 04:28:13] -rw------- 1 boinc boinc       186 Nov 24 04:28 output.list
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc       620 Nov 24 04:28 runtime_log
[2025-11-24 04:28:13] -rw------- 1 boinc boinc    174080 Nov 24 04:28 result.tar.gz
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      8744 Nov 24 04:28 runtime_log.err
[2025-11-24 04:28:13] -rw------- 1 boinc boinc       649 Nov 24 04:28 EJiMDmdUKh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVkKKDmzte1Mo.diag
[2025-11-24 04:28:13] -rw-r--r-- 1 boinc boinc      8125 Nov 24 04:28 stderr.txt
[2025-11-24 04:28:13] No HITS result produced
[2025-11-24 04:28:13]  *** Contents of shared directory: ***
[2025-11-24 04:28:13] total 402296
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc 411159915 Nov 24 04:23 ATLAS.root_0
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc    590094 Nov 24 04:23 input.tar.gz
[2025-11-24 04:28:13] -rw-r--r-- 2 boinc boinc     15847 Nov 24 04:23 start_atlas.sh
[2025-11-24 04:28:13] -rw------- 1 boinc boinc    174080 Nov 24 04:28 result.tar.gz
04:28:15 (1176051): run_atlas exited; CPU time 31.406210
04:28:15 (1176051): called boinc_finish(0)

</stderr_txt>
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