Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:57 (1387001): wrapper (7.7.26015): starting
17:31:57 (1387001): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 17:31:57] Arguments: --nthreads 12
[2025-11-24 17:31:57] Threads: 12
[2025-11-24 17:31:57] Checking for CVMFS
[2025-11-24 17:31:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:31:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:31:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:31:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:31:57] 2.13.3.0 9060 23711 383672 153252 3 81 25108066 46080000 7301 130560 0 131732996 99.877 44993680 26069 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-11-24 17:31:57] CVMFS is ok
[2025-11-24 17:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:31:57] Further information can be found at the LHC@home message board.
[2025-11-24 17:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:31:57] Checking for apptainer binary...
[2025-11-24 17:31:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:31:57] Running /usr/bin/apptainer --version
[2025-11-24 17:31:57] apptainer version 1.4.3-1.el9
[2025-11-24 17:31:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:31:58] mff2104.farm.particle.cz
[2025-11-24 17:31:58] apptainer works
[2025-11-24 17:31:58] Set ATHENA_PROC_NUMBER=12
[2025-11-24 17:31:58] Set ATHENA_CORE_NUMBER=12
[2025-11-24 17:31:58] Starting ATLAS job with PandaID=6895337697
[2025-11-24 17:31:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 23:03:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 23:03:49] 2025-11-24 22:03:02,775 | INFO     | time since job start (19852s) is within the limit (172800.0s)
[2025-11-24 23:03:49] 2025-11-24 22:03:02,914 | INFO     | monitor loop #1370: job 0:6895337697 is in state 'finished'
[2025-11-24 23:03:49] 2025-11-24 22:03:02,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,081 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 23:03:49] 2025-11-24 22:03:04,095 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2725.15109375
[2025-11-24 23:03:49] 2025-11-24 22:03:04,112 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6895337697/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,113 | INFO     | extracted standard info from prmon json
[2025-11-24 23:03:49] 2025-11-24 22:03:04,113 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 23:03:49] 2025-11-24 22:03:04,113 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 23:03:49] 2025-11-24 22:03:04,119 | INFO     | fitting pss+swap vs Time
[2025-11-24 23:03:49] 2025-11-24 22:03:04,119 | INFO     | sum of square deviations: 10644246147.692339
[2025-11-24 23:03:49] 2025-11-24 22:03:04,122 | INFO     | sum of deviations: 201730961619.50766
[2025-11-24 23:03:49] 2025-11-24 22:03:04,122 | INFO     | mean x: 1764011844.0307693
[2025-11-24 23:03:49] 2025-11-24 22:03:04,123 | INFO     | mean y: 3451252.0492307693
[2025-11-24 23:03:49] 2025-11-24 22:03:04,123 | INFO     | intersect: -33428301515.306416
[2025-11-24 23:03:49] 2025-11-24 22:03:04,123 | INFO     | chi2: 4.937128343981936
[2025-11-24 23:03:49] 2025-11-24 22:03:04,124 | INFO     | sum of square deviations: 10160581107.296875
[2025-11-24 23:03:49] 2025-11-24 22:03:04,126 | INFO     | sum of deviations: 313917858644.0469
[2025-11-24 23:03:49] 2025-11-24 22:03:04,127 | INFO     | mean x: 1764011691.546875
[2025-11-24 23:03:49] 2025-11-24 22:03:04,127 | INFO     | mean y: 3486556.496875
[2025-11-24 23:03:49] 2025-11-24 22:03:04,127 | INFO     | intersect: -54496818788.812164
[2025-11-24 23:03:49] 2025-11-24 22:03:04,127 | INFO     | chi2: 2.3704780407526678
[2025-11-24 23:03:49] 2025-11-24 22:03:04,127 | INFO     | current chi2=2.3704780407526678 (change=51.98670410012455 %)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,128 | INFO     | sum of square deviations: 9691741876.082582
[2025-11-24 23:03:49] 2025-11-24 22:03:04,130 | INFO     | sum of deviations: 333477949645.5843
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | mean x: 1764011539.0539682
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | mean y: 3492839.6126984125
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | intersect: -60693434370.81813
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | chi2: 2.0860682131387493
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | current chi2=2.0860682131387493 (change=11.997994612243417 %)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,131 | INFO     | right removable region: 314
[2025-11-24 23:03:49] 2025-11-24 22:03:04,132 | INFO     | sum of square deviations: 10160416043.471865
[2025-11-24 23:03:49] 2025-11-24 22:03:04,135 | INFO     | sum of deviations: 105283637965.16873
[2025-11-24 23:03:49] 2025-11-24 22:03:04,135 | INFO     | mean x: 1764011996.540625
[2025-11-24 23:03:49] 2025-11-24 22:03:04,135 | INFO     | mean y: 3481510.75625
[2025-11-24 23:03:49] 2025-11-24 22:03:04,135 | INFO     | intersect: -18275455061.85832
[2025-11-24 23:03:49] 2025-11-24 22:03:04,135 | INFO     | chi2: 2.9540800807350736
[2025-11-24 23:03:49] 2025-11-24 22:03:04,136 | INFO     | current chi2=2.9540800807350736 (change=40.166026181273565 %)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,136 | INFO     | sum of square deviations: 9691548387.542845
[2025-11-24 23:03:49] 2025-11-24 22:03:04,139 | INFO     | sum of deviations: 83143897801.5238
[2025-11-24 23:03:49] 2025-11-24 22:03:04,139 | INFO     | mean x: 1764012149.0380952
[2025-11-24 23:03:49] 2025-11-24 22:03:04,139 | INFO     | mean y: 3488697.873015873
[2025-11-24 23:03:49] 2025-11-24 22:03:04,139 | INFO     | intersect: -15129990491.973454
[2025-11-24 23:03:49] 2025-11-24 22:03:04,139 | INFO     | chi2: 2.90984029443797
[2025-11-24 23:03:49] 2025-11-24 22:03:04,140 | INFO     | current chi2=2.90984029443797 (change=1.497582499053148 %)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,140 | INFO     | left removable region: 20
[2025-11-24 23:03:49] 2025-11-24 22:03:04,140 | INFO     | sum of square deviations: 7879748304.833321
[2025-11-24 23:03:49] 2025-11-24 22:03:04,142 | INFO     | sum of deviations: 189833380813.50006
[2025-11-24 23:03:49] 2025-11-24 22:03:04,143 | INFO     | mean x: 1764012118.547619
[2025-11-24 23:03:49] 2025-11-24 22:03:04,143 | INFO     | mean y: 3540463.6428571427
[2025-11-24 23:03:49] 2025-11-24 22:03:04,143 | INFO     | intersect: -42493804794.76798
[2025-11-24 23:03:49] 2025-11-24 22:03:04,143 | INFO     | chi2: 0.018637608356583953
[2025-11-24 23:03:49] 2025-11-24 22:03:04,143 | INFO     | current memory leak: 24.09 B/s (using 294 data points, chi2=0.02)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | could have reported an average CPU frequency of 2730 MHz (14 samples)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | ..............................
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | . Timing measurements:
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | . get job = 0 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | . initial setup = 1 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | . payload setup = 7 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,144 | INFO     | . stage-in = 0 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,145 | INFO     | . payload execution = 19815 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,145 | INFO     | . stage-out = 2 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,145 | INFO     | . log creation = 0 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,145 | INFO     | ..............................
[2025-11-24 23:03:49] 2025-11-24 22:03:04,237 | INFO     | 
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | job summary report
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | --------------------------------------------------
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | PanDA job id: 6895337697
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | task id: 47556137
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | errors: (none)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | pilot state: finished 
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | transexitcode: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | exeerrorcode: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | exeerrordiag: 
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | exitcode: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | exitmsg: OK
[2025-11-24 23:03:49] 2025-11-24 22:03:04,238 | INFO     | cpuconsumptiontime: 226518 s
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | nevents: 1000
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | neventsw: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | pid: 1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | pgrp: 1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | corecount: 12
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | event service: False
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | sizes: {0: 2284260, 5: 2284522, 11: 2284578, 19826: 2318979, 19829: 2327975, 19832: 2328031, 19838: 2328405}
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | --------------------------------------------------
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | 
[2025-11-24 23:03:49] 2025-11-24 22:03:04,239 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-11-24 23:03:49] 2025-11-24 22:03:04,264 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,264 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,264 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | job 6895337697 has completed (purged errors)
[2025-11-24 23:03:49] 2025-11-24 22:03:04,266 | INFO     | overall cleanup function is called
[2025-11-24 23:03:49] 2025-11-24 22:03:05,289 | INFO     | --- collectZombieJob: --- 10, [1398152]
[2025-11-24 23:03:49] 2025-11-24 22:03:05,289 | INFO     | zombie collector waiting for pid 1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:05,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 23:03:49] 2025-11-24 22:03:05,290 | INFO     | collected zombie processes
[2025-11-24 23:03:49] 2025-11-24 22:03:05,290 | INFO     | will attempt to kill all subprocesses of pid=1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:05,661 | INFO     | process IDs to be killed: [1398152] (in reverse order)
[2025-11-24 23:03:49] 2025-11-24 22:03:05,789 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 23:03:49] 2025-11-24 22:03:05,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 23:03:49] 2025-11-24 22:03:05,803 | INFO     | did not find any defunct processes belonging to 1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:05,814 | INFO     | did not find any defunct processes belonging to 1398152
[2025-11-24 23:03:49] 2025-11-24 22:03:05,815 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 23:03:49] 2025-11-24 22:03:05,815 | INFO     | ready for new job
[2025-11-24 23:03:49] 2025-11-24 22:03:05,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 23:03:49] 2025-11-24 22:03:05,818 | INFO     | ***************************************
[2025-11-24 23:03:49] 2025-11-24 22:03:05,818 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 23:03:49] 2025-11-24 22:03:05,818 | INFO     | ***************************************
[2025-11-24 23:03:49] 2025-11-24 22:03:05,819 | INFO     | 
[2025-11-24 23:03:49] 2025-11-24 22:03:05,825 | INFO     | architecture information:
[2025-11-24 23:03:49] 2025-11-24 22:03:05,825 | INFO     | executing command: cat /etc/os-release
[2025-11-24 23:03:49] 2025-11-24 22:03:05,844 | INFO     | cat /etc/os-release:
[2025-11-24 23:03:49] NAME="CentOS Linux"
[2025-11-24 23:03:49] VERSION="7 (Core)"
[2025-11-24 23:03:49] ID="centos"
[2025-11-24 23:03:49] ID_LIKE="rhel fedora"
[2025-11-24 23:03:49] VERSION_ID="7"
[2025-11-24 23:03:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 23:03:49] ANSI_COLOR="0;31"
[2025-11-24 23:03:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 23:03:49] HOME_URL="https://www.centos.org/"
[2025-11-24 23:03:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 23:03:49] 
[2025-11-24 23:03:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 23:03:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 23:03:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 23:03:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 23:03:49] 
[2025-11-24 23:03:49] 2025-11-24 22:03:05,844 | INFO     | ***************************************
[2025-11-24 23:03:49] 2025-11-24 22:03:06,345 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-11-24 23:03:49] 2025-11-24 22:03:06,434 | INFO     | sufficient remaining disk space (1674718478336 B)
[2025-11-24 23:03:49] 2025-11-24 22:03:06,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 23:03:49] 2025-11-24 22:03:06,434 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 23:03:49] 2025-11-24 22:03:06,434 | INFO     | update_server=False
[2025-11-24 23:03:49] 2025-11-24 22:03:06,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 23:03:49] 2025-11-24 22:03:06,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:03:49] 2025-11-24 22:03:06,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 23:03:49] 2025-11-24 22:03:06,435 | INFO     | aborting loop
[2025-11-24 23:03:49] 2025-11-24 22:03:06,575 | INFO     | all data control threads have been joined
[2025-11-24 23:03:49] 2025-11-24 22:03:07,240 | INFO     | all job control threads have been joined
[2025-11-24 23:03:49] 2025-11-24 22:03:07,440 | INFO     | [job] retrieve thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:07,440 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:07,441 | INFO     | [job] job monitor thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:07,580 | INFO     | [data] control thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:07,659 | INFO     | all payload control threads have been joined
[2025-11-24 23:03:49] 2025-11-24 22:03:07,736 | INFO     | [data] copytool_in thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:07,947 | INFO     | [payload] failed_post thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,118 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,246 | INFO     | [job] control thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,407 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,425 | INFO     | [payload] validate_post thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,436 | INFO     | [job] validate thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,440 | INFO     | [data] copytool_out thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,660 | INFO     | [payload] control thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:08,913 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:09,109 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 23:03:49] 2025-11-24 22:03:09,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 23:03:49] 2025-11-24 22:03:10,249 | INFO     | [job] queue monitor thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:13,115 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 23:03:49] 2025-11-24 22:03:36,320 | INFO     | PID=1391097 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 23:03:49] 2025-11-24 22:03:36,320 | INFO     | .. there are 8 such processes running
[2025-11-24 23:03:49] 2025-11-24 22:03:36,321 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 23:03:49] 2025-11-24 22:03:36,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 23:03:49] 2025-11-24 22:03:36,321 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 23:03:49] 2025-11-24 22:03:42,392 | INFO     | [monitor] cgroup control has ended
[2025-11-24 23:03:49] 2025-11-24 22:03:44,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831300220736)>', '<ExcThread(monitor, started 139830805636864)>']
[2025-11-24 23:03:49] 2025-11-24 22:03:44,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 23:03:49] 2025-11-24 22:03:44,350 | INFO     | [monitor] control thread has ended
[2025-11-24 23:03:49] 2025-11-24 22:03:49,219 | INFO     | all workflow threads have been joined
[2025-11-24 23:03:49] 2025-11-24 22:03:49,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 23:03:49] 2025-11-24 22:03:49,220 | INFO     | traces error code: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:49,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 23:03:49] 2025-11-24 22:03:49,339 [wrapper] ==== pilot stdout END ====
[2025-11-24 23:03:49] 2025-11-24 22:03:49,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 23:03:49] 2025-11-24 22:03:49,346 [wrapper] pilotpid: 1391097
[2025-11-24 23:03:49] 2025-11-24 22:03:49,351 [wrapper] Pilot exit status: 0
[2025-11-24 23:03:49] 2025-11-24 22:03:49,364 [wrapper] pandaids: 6895337697
[2025-11-24 23:03:49] 2025-11-24 22:03:49,448 [wrapper] cleanup supervisor_pilot 1875814 1391098
[2025-11-24 23:03:49] 2025-11-24 22:03:49,453 [wrapper] Test setup, not cleaning
[2025-11-24 23:03:49] 2025-11-24 22:03:49,457 [wrapper] apfmon messages muted
[2025-11-24 23:03:49] 2025-11-24 22:03:49,460 [wrapper] ==== wrapper stdout END ====
[2025-11-24 23:03:49] 2025-11-24 22:03:49,463 [wrapper] ==== wrapper stderr END ====
[2025-11-24 23:03:49]  *** Error codes and diagnostics ***
[2025-11-24 23:03:49]     "exeErrorCode": 0,
[2025-11-24 23:03:49]     "exeErrorDiag": "",
[2025-11-24 23:03:49]     "pilotErrorCode": 0,
[2025-11-24 23:03:49]     "pilotErrorDiag": "",
[2025-11-24 23:03:49]  *** Listing of results directory ***
[2025-11-24 23:03:49] total 1297804
[2025-11-24 23:03:49] -rwx------ 1 boinc boinc     36292 Nov 22 09:29 runpilot2-wrapper.sh
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc      5112 Nov 22 09:29 queuedata.json
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc    576529 Nov 22 09:29 pilot3.tar.gz
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc       100 Nov 24 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 23:03:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 17:31 run_atlas
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc       105 Nov 24 17:31 job.xml
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc 409684948 Nov 24 17:31 EVNT.47483658._000316.pool.root.1
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc      6665 Nov 24 17:31 init_data.xml
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 17:31 start_atlas.sh
[2025-11-24 23:03:49] drwxrwx--x 2 boinc boinc      4096 Nov 24 17:31 shared
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc    590095 Nov 24 17:31 input.tar.gz
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc         0 Nov 24 17:31 boinc_lockfile
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc      2785 Nov 24 17:31 pandaJob.out
[2025-11-24 23:03:49] -rw------- 1 boinc boinc    991965 Nov 24 17:32 agis_schedconf.cvmfs.json
[2025-11-24 23:03:49] drwx------ 5 boinc boinc      4096 Nov 24 17:32 pilot3
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc       533 Nov 24 22:53 boinc_task_state.xml
[2025-11-24 23:03:49] -rw------- 1 boinc boinc 905676042 Nov 24 23:02 HITS.47556137._003129.pool.root.1
[2025-11-24 23:03:49] -rw------- 1 boinc boinc      1046 Nov 24 23:02 memory_monitor_summary.json
[2025-11-24 23:03:49] -rw------- 1 boinc boinc   1516227 Nov 24 23:02 agis_ddmendpoints.agis.ALL.json
[2025-11-24 23:03:49] -rw------- 1 boinc boinc   2074091 Nov 24 23:02 log.47556137._003129.job.log.tgz.1
[2025-11-24 23:03:49] -rw------- 1 boinc boinc        95 Nov 24 23:02 pilot_heartbeat.json
[2025-11-24 23:03:49] -rw------- 1 boinc boinc      8594 Nov 24 23:03 heartbeat.json
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc      8192 Nov 24 23:03 boinc_mmap_file
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc        29 Nov 24 23:03 wrapper_checkpoint.txt
[2025-11-24 23:03:49] -rw------- 1 boinc boinc      4826 Nov 24 23:03 pilotlog.txt
[2025-11-24 23:03:49] -rw------- 1 boinc boinc   2762087 Nov 24 23:03 log.47556137._003129.job.log.1
[2025-11-24 23:03:49] -rw------- 1 boinc boinc       353 Nov 24 23:03 output.list
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc       620 Nov 24 23:03 runtime_log
[2025-11-24 23:03:49] -rw------- 1 boinc boinc   4853760 Nov 24 23:03 result.tar.gz
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc      8881 Nov 24 23:03 runtime_log.err
[2025-11-24 23:03:49] -rw------- 1 boinc boinc       671 Nov 24 23:03 QmuNDmfAyg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm13JKDmhTotPn.diag
[2025-11-24 23:03:49] -rw-r--r-- 1 boinc boinc     21338 Nov 24 23:03 stderr.txt
[2025-11-24 23:03:49] HITS file was successfully produced:
[2025-11-24 23:03:49] -rw------- 1 boinc boinc 905676042 Nov 24 23:02 shared/HITS.pool.root.1
[2025-11-24 23:03:49]  *** Contents of shared directory: ***
[2025-11-24 23:03:49] total 1289880
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc 409684948 Nov 24 17:31 ATLAS.root_0
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc     15847 Nov 24 17:31 start_atlas.sh
[2025-11-24 23:03:49] -rw-r--r-- 2 boinc boinc    590095 Nov 24 17:31 input.tar.gz
[2025-11-24 23:03:49] -rw------- 1 boinc boinc 905676042 Nov 24 23:02 HITS.pool.root.1
[2025-11-24 23:03:49] -rw------- 1 boinc boinc   4853760 Nov 24 23:03 result.tar.gz
23:03:51 (1387001): run_atlas exited; CPU time 226489.540081
23:03:51 (1387001): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN