Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
22:04:53 (57601): wrapper (7.7.26015): starting
22:04:53 (57601): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 22:04:53] Arguments: --nthreads 12
[2025-11-23 22:04:53] Threads: 12
[2025-11-23 22:04:53] Checking for CVMFS
[2025-11-23 22:04:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:04:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:04:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:04:55] 2.13.3.0 3382 578 38856 153229 0 48 3021755 4096000 1302 130560 0 198468 99.982 19483 1345 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-23 22:04:55] CVMFS is ok
[2025-11-23 22:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:04:55] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-23 22:04:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-23 22:04:55] Further information can be found at the LHC@home message board.
[2025-11-23 22:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:04:55] Checking for apptainer binary...
[2025-11-23 22:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:04:55] Running /usr/bin/apptainer --version
[2025-11-23 22:04:56] apptainer version 1.4.4
[2025-11-23 22:04:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:04:56] zhiwei-Z790-Riptide-WiFi
[2025-11-23 22:04:56] apptainer works
[2025-11-23 22:04:56] Set ATHENA_PROC_NUMBER=12
[2025-11-23 22:04:56] Set ATHENA_CORE_NUMBER=12
[2025-11-23 22:04:56] Starting ATLAS job with PandaID=6891571725
[2025-11-23 22:04:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:59:31]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:59:31] 2025-11-24 05:58:33,422 | INFO     | time since job start (10405s) is within the limit (172800.0s)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,792 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 00:59:31] 2025-11-24 05:58:33,794 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 3579.5744374999995
[2025-11-24 00:59:31] 2025-11-24 05:58:33,796 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891571725/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,796 | INFO     | extracted standard info from prmon json
[2025-11-24 00:59:31] 2025-11-24 05:58:33,796 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:59:31] 2025-11-24 05:58:33,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:59:31] 2025-11-24 05:58:33,797 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | sum of square deviations: 1550429070.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | sum of deviations: 65340534483.00001
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | mean x: 1763958712.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | mean y: 3413713.052631579
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | intersect: -74336010952.16232
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | chi2: 3.5120719535168745
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | sum of square deviations: 1418361477.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | sum of deviations: 105727960646.50002
[2025-11-24 00:59:31] 2025-11-24 05:58:33,798 | INFO     | mean x: 1763958559.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | mean y: 3459726.8855421687
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | intersect: -131486110540.91162
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | chi2: 1.6534734020748618
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | current chi2=1.6534734020748618 (change=52.92028682900054 %)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | sum of square deviations: 1294014960.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | sum of deviations: 100083780553.99998
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | mean x: 1763958407.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | mean y: 3452802.7888198756
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | intersect: -136427447588.47975
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | chi2: 1.6512275184612062
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | current chi2=1.6512275184612062 (change=0.1358282274657326 %)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | right removable region: 160
[2025-11-24 00:59:31] 2025-11-24 05:58:33,799 | INFO     | sum of square deviations: 1418361477.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | sum of deviations: 24471168456.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | mean x: 1763958864.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | mean y: 3460367.204819277
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | intersect: -30430343150.018795
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | chi2: 1.9330895927976797
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | current chi2=1.9330895927976797 (change=44.95871330705663 %)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | sum of square deviations: 1294014960.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | sum of deviations: 16608437975.000002
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | mean x: 1763959017.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | mean y: 3469986.118012422
[2025-11-24 00:59:31] 2025-11-24 05:58:33,800 | INFO     | intersect: -22636611334.337875
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | chi2: 1.9217623554063241
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | current chi2=1.9217623554063241 (change=0.5859654634507712 %)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | left removable region: 20
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | sum of square deviations: 850825255.0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | sum of deviations: 37738540935.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | mean x: 1763958986.5
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | mean y: 3535593.035714286
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | intersect: -78237252429.38063
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | chi2: 0.009937623846202209
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | current memory leak: 44.36 B/s (using 140 data points, chi2=0.01)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | could have reported an average CPU frequency of 4176 MHz (9 samples)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | ..............................
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | . Timing measurements:
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | . get job = 0 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | . initial setup = 2 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,801 | INFO     | . payload setup = 2 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,802 | INFO     | . stage-in = 0 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,802 | INFO     | . payload execution = 10380 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,802 | INFO     | . stage-out = 0 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,802 | INFO     | . log creation = 0 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,802 | INFO     | ..............................
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | 
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | job summary report
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | --------------------------------------------------
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | PanDA job id: 6891571725
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | task id: 47493068
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | errors: (none)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | pilot state: finished 
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | transexitcode: 0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | exeerrorcode: 0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | exeerrordiag: 
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | exitcode: 0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | exitmsg: OK
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | cpuconsumptiontime: 119674 s
[2025-11-24 00:59:31] 2025-11-24 05:58:33,939 | INFO     | nevents: 1000
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | neventsw: 0
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | pid: 68445
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | pgrp: 68445
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | corecount: 12
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | event service: False
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | sizes: {0: 2298626, 1: 2298825, 3: 2299087, 11: 2299115, 10386: 2329134, 10388: 2338130, 10390: 2338314, 10392: 2338624}
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | --------------------------------------------------
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | 
[2025-11-24 00:59:31] 2025-11-24 05:58:33,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | job 6891571725 has completed (purged errors)
[2025-11-24 00:59:31] 2025-11-24 05:58:33,947 | INFO     | overall cleanup function is called
[2025-11-24 00:59:31] 2025-11-24 05:58:34,956 | INFO     | --- collectZombieJob: --- 10, [68445]
[2025-11-24 00:59:31] 2025-11-24 05:58:34,957 | INFO     | zombie collector waiting for pid 68445
[2025-11-24 00:59:31] 2025-11-24 05:58:34,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:59:31] 2025-11-24 05:58:34,957 | INFO     | collected zombie processes
[2025-11-24 00:59:31] 2025-11-24 05:58:34,957 | INFO     | will attempt to kill all subprocesses of pid=68445
[2025-11-24 00:59:31] 2025-11-24 05:58:35,034 | INFO     | process IDs to be killed: [68445] (in reverse order)
[2025-11-24 00:59:31] 2025-11-24 05:58:35,053 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:59:31] 2025-11-24 05:58:35,054 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:59:31] 2025-11-24 05:58:35,055 | INFO     | did not find any defunct processes belonging to 68445
[2025-11-24 00:59:31] 2025-11-24 05:58:35,056 | INFO     | did not find any defunct processes belonging to 68445
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | ready for new job
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | ***************************************
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | ***************************************
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | 
[2025-11-24 00:59:31] 2025-11-24 05:58:35,057 | INFO     | architecture information:
[2025-11-24 00:59:31] 2025-11-24 05:58:35,058 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:59:31] 2025-11-24 05:58:35,063 | INFO     | cat /etc/os-release:
[2025-11-24 00:59:31] NAME="CentOS Linux"
[2025-11-24 00:59:31] VERSION="7 (Core)"
[2025-11-24 00:59:31] ID="centos"
[2025-11-24 00:59:31] ID_LIKE="rhel fedora"
[2025-11-24 00:59:31] VERSION_ID="7"
[2025-11-24 00:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:59:31] ANSI_COLOR="0;31"
[2025-11-24 00:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:59:31] HOME_URL="https://www.centos.org/"
[2025-11-24 00:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:59:31] 
[2025-11-24 00:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:59:31] 
[2025-11-24 00:59:31] 2025-11-24 05:58:35,063 | INFO     | ***************************************
[2025-11-24 00:59:31] 2025-11-24 05:58:35,565 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | INFO     | sufficient remaining disk space (1779611729920 B)
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | INFO     | update_server=False
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:59:31] 2025-11-24 05:58:35,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:59:31] 2025-11-24 05:58:35,676 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 00:59:31] 2025-11-24 05:58:35,676 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 00:59:31] 2025-11-24 05:58:35,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:59:31] 2025-11-24 05:58:35,676 | INFO     | will abort loop
[2025-11-24 00:59:31] 2025-11-24 05:58:35,973 | INFO     | all job control threads have been joined
[2025-11-24 00:59:31] 2025-11-24 05:58:36,538 | INFO     | all data control threads have been joined
[2025-11-24 00:59:31] 2025-11-24 05:58:36,576 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,577 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,641 | INFO     | all payload control threads have been joined
[2025-11-24 00:59:31] 2025-11-24 05:58:36,673 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,682 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,764 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,812 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:36,978 | INFO     | [job] control thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:59:31] 2025-11-24 05:58:37,543 | INFO     | [data] control thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,577 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,578 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,646 | INFO     | [payload] control thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,765 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,910 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:37,997 | INFO     | [job] validate thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:58:41,325 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:59:31] 2025-11-24 05:59:06,541 | INFO     | PID=61782 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:59:31] 2025-11-24 05:59:06,541 | INFO     | .. there are 2 such processes running
[2025-11-24 00:59:31] 2025-11-24 05:59:06,541 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:59:31] 2025-11-24 05:59:06,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:59:31] 2025-11-24 05:59:06,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:59:31] 2025-11-24 05:59:25,405 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:59:31] 2025-11-24 05:59:26,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137025003685696)>', '<ExcThread(monitor, started 137024203904768)>']
[2025-11-24 00:59:31] 2025-11-24 05:59:26,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:59:31] 2025-11-24 05:59:26,641 | INFO     | [monitor] control thread has ended
[2025-11-24 00:59:31] 2025-11-24 05:59:31,617 | INFO     | all workflow threads have been joined
[2025-11-24 00:59:31] 2025-11-24 05:59:31,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:59:31] 2025-11-24 05:59:31,617 | INFO     | traces error code: 0
[2025-11-24 00:59:31] 2025-11-24 05:59:31,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:59:31] 2025-11-24 05:59:31,653 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:59:31] 2025-11-24 05:59:31,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:59:31] 2025-11-24 05:59:31,655 [wrapper] pilotpid: 61782
[2025-11-24 00:59:31] 2025-11-24 05:59:31,656 [wrapper] Pilot exit status: 0
[2025-11-24 00:59:31] 2025-11-24 05:59:31,659 [wrapper] pandaids: 6891571725
[2025-11-24 00:59:31] 2025-11-24 05:59:31,675 [wrapper] cleanup supervisor_pilot  121192 61783
[2025-11-24 00:59:31] 2025-11-24 05:59:31,676 [wrapper] Test setup, not cleaning
[2025-11-24 00:59:31] 2025-11-24 05:59:31,677 [wrapper] apfmon messages muted
[2025-11-24 00:59:31] 2025-11-24 05:59:31,677 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:59:31] 2025-11-24 05:59:31,678 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:59:31]  *** Error codes and diagnostics ***
[2025-11-24 00:59:31]     "exeErrorCode": 0,
[2025-11-24 00:59:31]     "exeErrorDiag": "",
[2025-11-24 00:59:31]     "pilotErrorCode": 0,
[2025-11-24 00:59:31]     "pilotErrorDiag": "",
[2025-11-24 00:59:31]  *** Listing of results directory ***
[2025-11-24 00:59:31] total 1318588
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc    576529 Nov 18 10:47 pilot3.tar.gz
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc      5112 Nov 18 10:58 queuedata.json
[2025-11-24 00:59:31] -rwx------ 1 boinc boinc     36292 Nov 18 10:58 runpilot2-wrapper.sh
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc       100 Nov 23 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:59:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 22:04 run_atlas
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc       105 Nov 23 22:04 job.xml
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc 411783974 Nov 23 22:04 EVNT.47493065._000297.pool.root.1
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc    590098 Nov 23 22:04 input.tar.gz
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc     15120 Nov 23 22:04 start_atlas.sh
[2025-11-24 00:59:31] drwxrwx--x 2 boinc boinc      4096 Nov 23 22:04 shared
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc         0 Nov 23 22:04 boinc_setup_complete
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc      8827 Nov 23 22:04 init_data.xml
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc         0 Nov 23 22:04 boinc_lockfile
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc      2773 Nov 23 22:04 pandaJob.out
[2025-11-24 00:59:31] -rw------- 1 boinc boinc    989786 Nov 23 22:05 agis_schedconf.cvmfs.json
[2025-11-24 00:59:31] -rw------- 1 boinc boinc   1526164 Nov 23 22:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:59:31] drwx------ 5 boinc boinc      4096 Nov 23 22:05 pilot3
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc       532 Nov 24 00:55 boinc_task_state.xml
[2025-11-24 00:59:31] -rw------- 1 boinc boinc 927678319 Nov 24 00:58 HITS.47493068._002968.pool.root.1
[2025-11-24 00:59:31] -rw------- 1 boinc boinc        95 Nov 24 00:58 pilot_heartbeat.json
[2025-11-24 00:59:31] -rw------- 1 boinc boinc      1039 Nov 24 00:58 memory_monitor_summary.json
[2025-11-24 00:59:31] -rw------- 1 boinc boinc   1892489 Nov 24 00:58 log.47493068._002968.job.log.tgz.1
[2025-11-24 00:59:31] -rw------- 1 boinc boinc      8622 Nov 24 00:58 heartbeat.json
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc        29 Nov 24 00:59 wrapper_checkpoint.txt
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc      8192 Nov 24 00:59 boinc_mmap_file
[2025-11-24 00:59:31] -rw------- 1 boinc boinc      5010 Nov 24 00:59 pilotlog.txt
[2025-11-24 00:59:31] -rw------- 1 boinc boinc   1530303 Nov 24 00:59 log.47493068._002968.job.log.1
[2025-11-24 00:59:31] -rw------- 1 boinc boinc       353 Nov 24 00:59 output.list
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc       620 Nov 24 00:59 runtime_log
[2025-11-24 00:59:31] -rw------- 1 boinc boinc   3440640 Nov 24 00:59 result.tar.gz
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc      8756 Nov 24 00:59 runtime_log.err
[2025-11-24 00:59:31] -rw------- 1 boinc boinc       672 Nov 24 00:59 HWsLDmVHdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjiFKDmo3CKxn.diag
[2025-11-24 00:59:31] -rw-r--r-- 1 boinc boinc     21287 Nov 24 00:59 stderr.txt
[2025-11-24 00:59:31] HITS file was successfully produced:
[2025-11-24 00:59:31] -rw------- 1 boinc boinc 927678319 Nov 24 00:58 shared/HITS.pool.root.1
[2025-11-24 00:59:31]  *** Contents of shared directory: ***
[2025-11-24 00:59:31] total 1312036
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc 411783974 Nov 23 22:04 ATLAS.root_0
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc    590098 Nov 23 22:04 input.tar.gz
[2025-11-24 00:59:31] -rw-r--r-- 2 boinc boinc     15120 Nov 23 22:04 start_atlas.sh
[2025-11-24 00:59:31] -rw------- 1 boinc boinc 927678319 Nov 24 00:58 HITS.pool.root.1
[2025-11-24 00:59:31] -rw------- 1 boinc boinc   3440640 Nov 24 00:59 result.tar.gz
00:59:33 (57601): run_atlas exited; CPU time 119574.223239
00:59:33 (57601): called boinc_finish(0)

</stderr_txt>
]]>

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