Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:20:57 (21250): wrapper (7.7.26015): starting
08:20:57 (21250): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 08:20:57] Arguments: --nthreads 8
[2025-11-26 08:20:57] Threads: 8
[2025-11-26 08:20:57] Checking for CVMFS
[2025-11-26 08:20:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 08:20:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 08:20:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 08:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 08:20:59] 2.11.2.0 28532 284996 137360 153314 1 75 21206672 25165824 4214 130560 16 126547739 99.872 78075799 2939 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 08:20:59] CVMFS is ok
[2025-11-26 08:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 08:20:59] Checking for apptainer binary...
[2025-11-26 08:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 08:20:59] Running /usr/bin/apptainer --version
[2025-11-26 08:20:59] apptainer version 1.3.2-1.el7
[2025-11-26 08:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 08:21:16] cg-vwn472.simple-grid.lan
[2025-11-26 08:21:16] apptainer works
[2025-11-26 08:21:16] Set ATHENA_PROC_NUMBER=8
[2025-11-26 08:21:16] Set ATHENA_CORE_NUMBER=8
[2025-11-26 08:21:16] Starting ATLAS job with PandaID=6895355566
[2025-11-26 08:21:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:26:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:26:21] 2025-11-27 04:25:00,899 | INFO     | time since job start (75601s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:02,911 | INFO     | time since job start (75603s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:03,191 | INFO     | monitor loop #5149: job 0:6895355566 is in state 'finished'
[2025-11-27 05:26:21] 2025-11-27 04:25:03,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:26:21] 2025-11-27 04:25:04,917 | INFO     | time since job start (75605s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:05,704 | INFO     | monitor loop #5150: job 0:6895355566 is in state 'finished'
[2025-11-27 05:26:21] 2025-11-27 04:25:05,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:26:21] 2025-11-27 04:25:06,930 | INFO     | time since job start (75607s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:08,212 | INFO     | monitor loop #5151: job 0:6895355566 is in state 'finished'
[2025-11-27 05:26:21] 2025-11-27 04:25:08,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:26:21] 2025-11-27 04:25:08,937 | INFO     | time since job start (75609s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:10,716 | INFO     | monitor loop #5152: job 0:6895355566 is in state 'finished'
[2025-11-27 05:26:21] 2025-11-27 04:25:10,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:26:21] 2025-11-27 04:25:10,947 | INFO     | time since job start (75611s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:12,947 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:26:21] 2025-11-27 04:25:12,948 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-27 05:26:21] 2025-11-27 04:25:12,949 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6895355566/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:26:21] 2025-11-27 04:25:12,950 | INFO     | extracted standard info from prmon json
[2025-11-27 05:26:21] 2025-11-27 04:25:12,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:26:21] 2025-11-27 04:25:12,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:26:21] 2025-11-27 04:25:12,971 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:26:21] 2025-11-27 04:25:12,973 | INFO     | sum of square deviations: 575615913300.5383
[2025-11-27 05:26:21] 2025-11-27 04:25:12,986 | INFO     | time since job start (75613s) is within the limit (172800.0s)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,046 | INFO     | sum of deviations: 2679729816612.802
[2025-11-27 05:26:21] 2025-11-27 04:25:13,046 | INFO     | mean x: 1764179897.044752
[2025-11-27 05:26:21] 2025-11-27 04:25:13,047 | INFO     | mean y: 2834509.6216436126
[2025-11-27 05:26:21] 2025-11-27 04:25:13,047 | INFO     | intersect: -8210151550.601134
[2025-11-27 05:26:21] 2025-11-27 04:25:13,052 | INFO     | chi2: 22.45893831042858
[2025-11-27 05:26:21] 2025-11-27 04:25:13,054 | INFO     | sum of square deviations: 568619410935.0588
[2025-11-27 05:26:21] 2025-11-27 04:25:13,096 | INFO     | sum of deviations: 3092159656544.797
[2025-11-27 05:26:21] 2025-11-27 04:25:13,096 | INFO     | mean x: 1764179744.5490196
[2025-11-27 05:26:21] 2025-11-27 04:25:13,096 | INFO     | mean y: 2843498.336601307
[2025-11-27 05:26:21] 2025-11-27 04:25:13,096 | INFO     | intersect: -9590788600.886627
[2025-11-27 05:26:21] 2025-11-27 04:25:13,098 | INFO     | chi2: 19.1692375291765
[2025-11-27 05:26:21] 2025-11-27 04:25:13,098 | INFO     | current chi2=19.1692375291765 (change=14.647623746864921 %)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,098 | INFO     | right removable region: 1223
[2025-11-27 05:26:21] 2025-11-27 04:25:13,100 | INFO     | sum of square deviations: 568618627695.0587
[2025-11-27 05:26:21] 2025-11-27 04:25:13,139 | INFO     | sum of deviations: 2162929402093.1782
[2025-11-27 05:26:21] 2025-11-27 04:25:13,140 | INFO     | mean x: 1764180049.5490196
[2025-11-27 05:26:21] 2025-11-27 04:25:13,140 | INFO     | mean y: 2845772.4803921566
[2025-11-27 05:26:21] 2025-11-27 04:25:13,140 | INFO     | intersect: -6707797730.746741
[2025-11-27 05:26:21] 2025-11-27 04:25:13,141 | INFO     | chi2: 17.65438892946673
[2025-11-27 05:26:21] 2025-11-27 04:25:13,142 | INFO     | current chi2=17.65438892946673 (change=21.392593516902377 %)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,142 | INFO     | left removable region: 10
[2025-11-27 05:26:21] 2025-11-27 04:25:13,143 | INFO     | sum of square deviations: 553425609978.844
[2025-11-27 05:26:21] 2025-11-27 04:25:13,182 | INFO     | sum of deviations: 2231822873326.2773
[2025-11-27 05:26:21] 2025-11-27 04:25:13,182 | INFO     | mean x: 1764180019.0585325
[2025-11-27 05:26:21] 2025-11-27 04:25:13,182 | INFO     | mean y: 2866941.6298433635
[2025-11-27 05:26:21] 2025-11-27 04:25:13,182 | INFO     | intersect: -7111616465.364161
[2025-11-27 05:26:21] 2025-11-27 04:25:13,184 | INFO     | chi2: 9.889903081734248
[2025-11-27 05:26:21] 2025-11-27 04:25:13,184 | INFO     | current memory leak: 4.03 B/s (using 1213 data points, chi2=9.89)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,185 | INFO     | could have reported an average CPU frequency of 2249 MHz (42 samples)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,185 | INFO     | ..............................
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . Timing measurements:
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . get job = 0 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . initial setup = 16 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . payload setup = 179 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . stage-in = 0 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . payload execution = 75126 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . stage-out = 5 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | . log creation = 1 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,186 | INFO     | ..............................
[2025-11-27 05:26:21] 2025-11-27 04:25:13,796 | INFO     | 
[2025-11-27 05:26:21] 2025-11-27 04:25:13,796 | INFO     | job summary report
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | --------------------------------------------------
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | PanDA job id: 6895355566
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | task id: 47556137
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | errors: (none)
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | pilot state: finished 
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | transexitcode: 0
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | exeerrorcode: 0
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | exeerrordiag: 
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | exitcode: 0
[2025-11-27 05:26:21] 2025-11-27 04:25:13,797 | INFO     | exitmsg: OK
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | cpuconsumptiontime: 283422 s
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | nevents: 1000
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | neventsw: 0
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | pid: 31633
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | pgrp: 31633
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | corecount: 8
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | event service: False
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | sizes: {0: 2284088, 1: 2284343, 12: 2284343, 23: 2284371, 33: 2284399, 44: 2284455, 55: 2284611, 66: 2284639, 76: 2284667, 87: 2284723, 95: 2285013, 98: 2285321, 7
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | --------------------------------------------------
[2025-11-27 05:26:21] 2025-11-27 04:25:13,798 | INFO     | 
[2025-11-27 05:26:21] 2025-11-27 04:25:13,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:26:21] 2025-11-27 04:25:14,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,364 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:26:21] 2025-11-27 04:25:14,364 | INFO     | job 6895355566 has completed (purged errors)
[2025-11-27 05:26:21] 2025-11-27 04:25:14,364 | INFO     | overall cleanup function is called
[2025-11-27 05:26:21] 2025-11-27 04:25:15,388 | INFO     | --- collectZombieJob: --- 10, [31633]
[2025-11-27 05:26:21] 2025-11-27 04:25:15,388 | INFO     | zombie collector waiting for pid 31633
[2025-11-27 05:26:21] 2025-11-27 04:25:15,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:26:21] 2025-11-27 04:25:15,389 | INFO     | collected zombie processes
[2025-11-27 05:26:21] 2025-11-27 04:25:15,389 | INFO     | will attempt to kill all subprocesses of pid=31633
[2025-11-27 05:26:21] 2025-11-27 04:25:15,494 | INFO     | process IDs to be killed: [31633] (in reverse order)
[2025-11-27 05:26:21] 2025-11-27 04:25:16,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:26:21] 2025-11-27 04:25:16,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:26:21] 2025-11-27 04:25:16,491 | INFO     | did not find any defunct processes belonging to 31633
[2025-11-27 05:26:21] 2025-11-27 04:25:16,493 | INFO     | did not find any defunct processes belonging to 31633
[2025-11-27 05:26:21] 2025-11-27 04:25:16,538 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:26:21] 2025-11-27 04:25:16,539 | INFO     | ready for new job
[2025-11-27 05:26:21] 2025-11-27 04:25:16,539 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:26:21] 2025-11-27 04:25:16,543 | INFO     | ***************************************
[2025-11-27 05:26:21] 2025-11-27 04:25:16,543 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:26:21] 2025-11-27 04:25:16,543 | INFO     | ***************************************
[2025-11-27 05:26:21] 2025-11-27 04:25:16,543 | INFO     | 
[2025-11-27 05:26:21] 2025-11-27 04:25:16,544 | INFO     | pilot is running in a VM
[2025-11-27 05:26:21] 2025-11-27 04:25:16,544 | INFO     | architecture information:
[2025-11-27 05:26:21] 2025-11-27 04:25:16,557 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:26:21] 2025-11-27 04:25:16,806 | INFO     | cat /etc/os-release:
[2025-11-27 05:26:21] NAME="CentOS Linux"
[2025-11-27 05:26:21] VERSION="7 (Core)"
[2025-11-27 05:26:21] ID="centos"
[2025-11-27 05:26:21] ID_LIKE="rhel fedora"
[2025-11-27 05:26:21] VERSION_ID="7"
[2025-11-27 05:26:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:26:21] ANSI_COLOR="0;31"
[2025-11-27 05:26:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:26:21] HOME_URL="https://www.centos.org/"
[2025-11-27 05:26:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:26:21] 
[2025-11-27 05:26:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:26:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:26:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:26:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:26:21] 
[2025-11-27 05:26:21] 2025-11-27 04:25:16,806 | INFO     | ***************************************
[2025-11-27 05:26:21] 2025-11-27 04:25:17,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-27 05:26:21] 2025-11-27 04:25:17,512 | INFO     | sufficient remaining disk space (496037265408 B)
[2025-11-27 05:26:21] 2025-11-27 04:25:17,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:26:21] 2025-11-27 04:25:17,512 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:26:21] 2025-11-27 04:25:17,512 | INFO     | update_server=False
[2025-11-27 05:26:21] 2025-11-27 04:25:17,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:26:21] 2025-11-27 04:25:17,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:26:21] 2025-11-27 04:25:17,513 | INFO     | aborting loop
[2025-11-27 05:26:21] 2025-11-27 04:25:17,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:26:21] 2025-11-27 04:25:17,693 | INFO     | all job control threads have been joined
[2025-11-27 05:26:21] 2025-11-27 04:25:17,902 | INFO     | all payload control threads have been joined
[2025-11-27 05:26:21] 2025-11-27 04:25:18,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:26:21] 2025-11-27 04:25:18,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:26:21] 2025-11-27 04:25:18,518 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:18,519 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:18,532 | INFO     | all data control threads have been joined
[2025-11-27 05:26:21] 2025-11-27 04:25:18,553 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:18,661 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:18,699 | INFO     | [job] control thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:18,908 | INFO     | [payload] control thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,286 | INFO     | [job] validate thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,337 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,523 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,538 | INFO     | [data] control thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,696 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,697 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,708 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:19,849 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:22,342 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:26:21] 2025-11-27 04:25:38,288 [wrapper] supervise_pilot (15 min periods counter: 85)
[2025-11-27 05:26:21] 2025-11-27 04:25:46,154 | INFO     | PID=25058 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 05:26:21] 2025-11-27 04:25:46,155 | INFO     | .. there are 9 such processes running
[2025-11-27 05:26:21] 2025-11-27 04:25:46,155 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:26:21] 2025-11-27 04:25:46,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:26:21] 2025-11-27 04:25:46,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:26:21] 2025-11-27 04:26:10,147 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:26:21] 2025-11-27 04:26:12,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678267619136)>', '<ExcThread(monitor, started 139677805819648)>']
[2025-11-27 05:26:21] 2025-11-27 04:26:12,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:26:21] 2025-11-27 04:26:12,307 | INFO     | [monitor] control thread has ended
[2025-11-27 05:26:21] 2025-11-27 04:26:17,154 | INFO     | all workflow threads have been joined
[2025-11-27 05:26:21] 2025-11-27 04:26:17,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:26:21] 2025-11-27 04:26:17,155 | INFO     | traces error code: 0
[2025-11-27 05:26:21] 2025-11-27 04:26:17,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:26:21] 2025-11-27 04:26:17,465 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:26:21] 2025-11-27 04:26:17,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:26:21] 2025-11-27 04:26:17,567 [wrapper] pilotpid: 25058
[2025-11-27 05:26:21] 2025-11-27 04:26:17,585 [wrapper] Pilot exit status: 0
[2025-11-27 05:26:21] 2025-11-27 04:26:17,696 [wrapper] pandaids: 6895355566
[2025-11-27 05:26:21] 2025-11-27 04:26:18,729 [wrapper] cleanup supervisor_pilot 30713 25059
[2025-11-27 05:26:21] 2025-11-27 04:26:18,846 [wrapper] Test setup, not cleaning
[2025-11-27 05:26:21] 2025-11-27 04:26:18,955 [wrapper] apfmon messages muted
[2025-11-27 05:26:21] 2025-11-27 04:26:19,035 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:26:21] 2025-11-27 04:26:19,053 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:26:21]  *** Error codes and diagnostics ***
[2025-11-27 05:26:21]     "exeErrorCode": 0,
[2025-11-27 05:26:21]     "exeErrorDiag": "",
[2025-11-27 05:26:21]     "pilotErrorCode": 0,
[2025-11-27 05:26:21]     "pilotErrorDiag": "",
[2025-11-27 05:26:21]  *** Listing of results directory ***
[2025-11-27 05:26:21] total 1325120
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc    576529 Nov 23 08:49 pilot3.tar.gz
[2025-11-27 05:26:21] -rwx------. 1 boinc boinc     36292 Nov 23 09:01 runpilot2-wrapper.sh
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc      5112 Nov 23 09:01 queuedata.json
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc       100 Nov 26 08:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:26:21] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 08:20 run_atlas
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc       105 Nov 26 08:20 job.xml
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc      6392 Nov 26 08:20 init_data.xml
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc 412027548 Nov 26 08:20 EVNT.47483658._000666.pool.root.1
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 08:20 start_atlas.sh
[2025-11-27 05:26:21] drwxrwx--x. 2 boinc boinc        68 Nov 26 08:20 shared
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc    590092 Nov 26 08:20 input.tar.gz
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc         0 Nov 26 08:20 boinc_lockfile
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc      2786 Nov 26 08:21 pandaJob.out
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc    991877 Nov 26 08:24 agis_schedconf.cvmfs.json
[2025-11-27 05:26:21] drwx------. 5 boinc boinc      4096 Nov 26 08:24 pilot3
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc       533 Nov 27 05:01 boinc_task_state.xml
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc 916037731 Nov 27 05:21 HITS.47556137._006618.pool.root.1
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc      1030 Nov 27 05:23 memory_monitor_summary.json
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc   1516240 Nov 27 05:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc   2360639 Nov 27 05:23 log.47556137._006618.job.log.tgz.1
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc        95 Nov 27 05:24 pilot_heartbeat.json
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc      8629 Nov 27 05:25 heartbeat.json
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc      4884 Nov 27 05:26 pilotlog.txt
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc      8192 Nov 27 05:26 boinc_mmap_file
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc        29 Nov 27 05:26 wrapper_checkpoint.txt
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc  10115888 Nov 27 05:26 log.47556137._006618.job.log.1
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc       353 Nov 27 05:26 output.list
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc       620 Nov 27 05:26 runtime_log
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc  12492800 Nov 27 05:26 result.tar.gz
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc       662 Nov 27 05:26 V9gLDmADKh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvTIKDm0R1wjm.diag
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc      8817 Nov 27 05:26 runtime_log.err
[2025-11-27 05:26:21] -rw-r--r--. 1 boinc boinc     21401 Nov 27 05:26 stderr.txt
[2025-11-27 05:26:21] HITS file was successfully produced:
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc 916037731 Nov 27 05:21 shared/HITS.pool.root.1
[2025-11-27 05:26:21]  *** Contents of shared directory: ***
[2025-11-27 05:26:21] total 1309740
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc 412027548 Nov 26 08:20 ATLAS.root_0
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc     15847 Nov 26 08:20 start_atlas.sh
[2025-11-27 05:26:21] -rw-r--r--. 2 boinc boinc    590092 Nov 26 08:20 input.tar.gz
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc 916037731 Nov 27 05:21 HITS.pool.root.1
[2025-11-27 05:26:21] -rw-------. 1 boinc boinc  12492800 Nov 27 05:26 result.tar.gz
05:26:22 (21250): run_atlas exited; CPU time 283864.524020
05:26:22 (21250): called boinc_finish(0)

</stderr_txt>
]]>

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