Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:28:53 (1196891): wrapper (7.7.26015): starting
04:28:53 (1196891): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 04:28:53] Arguments: --nthreads 3
[2025-11-24 04:28:53] Threads: 3
[2025-11-24 04:28:53] Checking for CVMFS
[2025-11-24 04:28:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:28:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:28:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:28:54] 2.9.2.0 154488 223 60860 153231 1 88 34943548 36864001 0 130560 0 3130154 100.000 6495 4890 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 04:28:54] CVMFS is ok
[2025-11-24 04:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:28:54] Further information can be found at the LHC@home message board.
[2025-11-24 04:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:28:54] Checking for apptainer binary...
[2025-11-24 04:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:28:54] Running /usr/bin/apptainer --version
[2025-11-24 04:28:54] apptainer version 1.4.1-1.1
[2025-11-24 04:28:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:28:54] thA335
[2025-11-24 04:28:54] apptainer works
[2025-11-24 04:28:54] Set ATHENA_PROC_NUMBER=3
[2025-11-24 04:28:54] Set ATHENA_CORE_NUMBER=3
[2025-11-24 04:28:54] Starting ATLAS job with PandaID=6895336466
[2025-11-24 04:28:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:33:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:33:08] 2025-11-24 03:32:16,473 | INFO     | ***************************************
[2025-11-24 04:33:08] 2025-11-24 03:32:16,976 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | INFO     | sufficient remaining disk space (827502624768 B)
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | INFO     | update_server=False
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:33:08] 2025-11-24 03:32:16,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:33:08] 2025-11-24 03:32:16,990 | INFO     | aborting loop
[2025-11-24 04:33:08] 2025-11-24 03:32:16,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:33:08] 2025-11-24 03:32:17,231 | INFO     | all job control threads have been joined
[2025-11-24 04:33:08] 2025-11-24 03:32:17,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:33:08] 2025-11-24 03:32:17,995 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:17,996 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:17,997 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,009 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,014 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,074 | INFO     | all data control threads have been joined
[2025-11-24 04:33:08] 2025-11-24 03:32:18,098 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,220 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,237 | INFO     | [job] control thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:18,382 | INFO     | all payload control threads have been joined
[2025-11-24 04:33:08] 2025-11-24 03:32:18,559 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,030 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,080 | INFO     | [data] control thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,274 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,376 | INFO     | [job] validate thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,388 | INFO     | [payload] control thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:19,467 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:20,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:33:08] 2025-11-24 03:32:24,087 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:33:08] 2025-11-24 03:32:47,501 | INFO     | PID=1200611 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:33:08] 2025-11-24 03:32:47,502 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:33:08] 2025-11-24 03:32:47,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:33:08] 2025-11-24 03:32:47,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:33:08] 2025-11-24 03:33:02,713 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:33:08] 2025-11-24 03:33:03,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180116854592)>', '<ExcThread(monitor, started 140179402647296)>']
[2025-11-24 04:33:08] 2025-11-24 03:33:04,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:33:08] 2025-11-24 03:33:04,592 | INFO     | [monitor] control thread has ended
[2025-11-24 04:33:08] 2025-11-24 03:33:08,866 | INFO     | all workflow threads have been joined
[2025-11-24 04:33:08] 2025-11-24 03:33:08,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:33:08] 2025-11-24 03:33:08,867 | INFO     | traces error code: 0
[2025-11-24 04:33:08] 2025-11-24 03:33:08,867 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:33:08] 2025-11-24 03:33:08,914 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:33:08] 2025-11-24 03:33:08,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:33:08] 2025-11-24 03:33:08,920 [wrapper] pilotpid: 1200611
[2025-11-24 04:33:08] 2025-11-24 03:33:08,923 [wrapper] Pilot exit status: 0
[2025-11-24 04:33:08] 2025-11-24 03:33:08,930 [wrapper] pandaids: 6895336466
[2025-11-24 04:33:08] 2025-11-24 03:33:08,947 [wrapper] cleanup supervisor_pilot 1200617 1200612
[2025-11-24 04:33:08] 2025-11-24 03:33:08,951 [wrapper] Test setup, not cleaning
[2025-11-24 04:33:08] 2025-11-24 03:33:08,954 [wrapper] apfmon messages muted
[2025-11-24 04:33:08] 2025-11-24 03:33:08,957 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:33:08] 2025-11-24 03:33:08,959 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:33:08]  *** Error codes and diagnostics ***
[2025-11-24 04:33:09]     "exeErrorCode": 65,
[2025-11-24 04:33:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 04:33:09]     "pilotErrorCode": 1305,
[2025-11-24 04:33:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 04:33:09]  *** Listing of results directory ***
[2025-11-24 04:33:09] total 404492
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc    576529 Nov 22 06:12 pilot3.tar.gz
[2025-11-24 04:33:09] -rwx------ 1 boinc boinc     36292 Nov 22 06:39 runpilot2-wrapper.sh
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      5112 Nov 22 06:39 queuedata.json
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc       100 Nov 24 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:33:09] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 04:28 run_atlas
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc       105 Nov 24 04:28 job.xml
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc 410001629 Nov 24 04:28 EVNT.47483658._000284.pool.root.1
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc    590093 Nov 24 04:28 input.tar.gz
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc     15847 Nov 24 04:28 start_atlas.sh
[2025-11-24 04:33:09] drwxrwx--x 2 boinc boinc      4096 Nov 24 04:28 shared
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc         0 Nov 24 04:28 boinc_setup_complete
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      6195 Nov 24 04:28 init_data.xml
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc         0 Nov 24 04:28 boinc_lockfile
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      2783 Nov 24 04:28 pandaJob.out
[2025-11-24 04:33:09] -rw------- 1 boinc boinc    989786 Nov 24 04:29 agis_schedconf.cvmfs.json
[2025-11-24 04:33:09] -rw------- 1 boinc boinc   1526164 Nov 24 04:29 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:33:09] drwx------ 5 boinc boinc      4096 Nov 24 04:29 pilot3
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc       522 Nov 24 04:30 boinc_task_state.xml
[2025-11-24 04:33:09] -rw------- 1 boinc boinc       963 Nov 24 04:30 memory_monitor_summary.json
[2025-11-24 04:33:09] -rw------- 1 boinc boinc     55631 Nov 24 04:30 log.47556137._002801.job.log.tgz.1
[2025-11-24 04:33:09] -rw------- 1 boinc boinc        95 Nov 24 04:32 pilot_heartbeat.json
[2025-11-24 04:33:09] -rw------- 1 boinc boinc      8399 Nov 24 04:32 heartbeat.json
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      8192 Nov 24 04:32 boinc_mmap_file
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc        22 Nov 24 04:32 wrapper_checkpoint.txt
[2025-11-24 04:33:09] -rw------- 1 boinc boinc      4752 Nov 24 04:33 pilotlog.txt
[2025-11-24 04:33:09] -rw------- 1 boinc boinc     93469 Nov 24 04:33 log.47556137._002801.job.log.1
[2025-11-24 04:33:09] -rw------- 1 boinc boinc       186 Nov 24 04:33 output.list
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc       620 Nov 24 04:33 runtime_log
[2025-11-24 04:33:09] -rw------- 1 boinc boinc    163840 Nov 24 04:33 result.tar.gz
[2025-11-24 04:33:09] -rw------- 1 boinc boinc       649 Nov 24 04:33 wR7MDmUWvg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzzJKDmUQ9wum.diag
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      8744 Nov 24 04:33 runtime_log.err
[2025-11-24 04:33:09] -rw-r--r-- 1 boinc boinc      8335 Nov 24 04:33 stderr.txt
[2025-11-24 04:33:09] No HITS result produced
[2025-11-24 04:33:09]  *** Contents of shared directory: ***
[2025-11-24 04:33:09] total 401156
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc 410001629 Nov 24 04:28 ATLAS.root_0
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc    590093 Nov 24 04:28 input.tar.gz
[2025-11-24 04:33:09] -rw-r--r-- 2 boinc boinc     15847 Nov 24 04:28 start_atlas.sh
[2025-11-24 04:33:09] -rw------- 1 boinc boinc    163840 Nov 24 04:33 result.tar.gz
04:33:10 (1196891): run_atlas exited; CPU time 30.693199
04:33:10 (1196891): called boinc_finish(0)

</stderr_txt>
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