Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:13:24 (3813): wrapper (7.7.26015): starting
22:13:24 (3813): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 22:13:24] Arguments: --nthreads 8
[2025-11-23 22:13:24] Threads: 8
[2025-11-23 22:13:24] Checking for CVMFS
[2025-11-23 22:13:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 22:13:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 22:13:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 22:13:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 22:13:25] 2.11.2.0 2893 62279 81580 153230 3 81 14864138 20275201 1 130560 0 16104681 99.808 4194496 30018 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 22:13:25] CVMFS is ok
[2025-11-23 22:13:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 22:13:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 22:13:25] Further information can be found at the LHC@home message board.
[2025-11-23 22:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 22:13:25] Checking for apptainer binary...
[2025-11-23 22:13:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 22:13:25] Running /usr/bin/apptainer --version
[2025-11-23 22:13:25] apptainer version 1.3.2-1.el7
[2025-11-23 22:13:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 22:13:26] c-204-22.aglt2.org
[2025-11-23 22:13:26] apptainer works
[2025-11-23 22:13:26] Set ATHENA_PROC_NUMBER=8
[2025-11-23 22:13:26] Set ATHENA_CORE_NUMBER=8
[2025-11-23 22:13:26] Starting ATLAS job with PandaID=6895334220
[2025-11-23 22:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:52:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:52:06] 2025-11-24 15:50:59,243 | INFO     | monitor loop #3346: job 0:6895334220 is in state 'finished'
[2025-11-24 10:52:06] 2025-11-24 15:50:59,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,318 | INFO     | time since job start (45435s) is within the limit (172800.0s)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,318 | INFO     | 45437s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 10:52:06] 2025-11-24 15:50:59,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 10:52:06] 2025-11-24 15:50:59,854 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-24 10:52:06] 2025-11-24 15:50:59,855 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895334220/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,856 | INFO     | extracted standard info from prmon json
[2025-11-24 10:52:06] 2025-11-24 15:50:59,856 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:52:06] 2025-11-24 15:50:59,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:52:06] 2025-11-24 15:50:59,868 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:52:06] 2025-11-24 15:50:59,869 | INFO     | sum of square deviations: 128217477767.23483
[2025-11-24 10:52:06] 2025-11-24 15:50:59,881 | INFO     | sum of deviations: 885870413551.2681
[2025-11-24 10:52:06] 2025-11-24 15:50:59,881 | INFO     | mean x: 1763976748.5369127
[2025-11-24 10:52:06] 2025-11-24 15:50:59,881 | INFO     | mean y: 2860221.499328859
[2025-11-24 10:52:06] 2025-11-24 15:50:59,881 | INFO     | intersect: -12184673326.446835
[2025-11-24 10:52:06] 2025-11-24 15:50:59,882 | INFO     | chi2: 6.452935417311163
[2025-11-24 10:52:06] 2025-11-24 15:50:59,883 | INFO     | sum of square deviations: 125653328430.78372
[2025-11-24 10:52:06] 2025-11-24 15:50:59,897 | INFO     | sum of deviations: 1156859258412.0938
[2025-11-24 10:52:06] 2025-11-24 15:50:59,897 | INFO     | mean x: 1763976596.0405405
[2025-11-24 10:52:06] 2025-11-24 15:50:59,897 | INFO     | mean y: 2876340.2635135134
[2025-11-24 10:52:06] 2025-11-24 15:50:59,897 | INFO     | intersect: -16237621880.011295
[2025-11-24 10:52:06] 2025-11-24 15:50:59,898 | INFO     | chi2: 2.763479627090429
[2025-11-24 10:52:06] 2025-11-24 15:50:59,898 | INFO     | current chi2=2.763479627090429 (change=57.17484449515957 %)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,899 | INFO     | sum of square deviations: 123123598344.31287
[2025-11-24 10:52:06] 2025-11-24 15:50:59,910 | INFO     | sum of deviations: 1206174639596.961
[2025-11-24 10:52:06] 2025-11-24 15:50:59,910 | INFO     | mean x: 1763976443.5442176
[2025-11-24 10:52:06] 2025-11-24 15:50:59,910 | INFO     | mean y: 2879301.7551020407
[2025-11-24 10:52:06] 2025-11-24 15:50:59,910 | INFO     | intersect: -17277834384.82433
[2025-11-24 10:52:06] 2025-11-24 15:50:59,911 | INFO     | chi2: 2.4410045370236717
[2025-11-24 10:52:06] 2025-11-24 15:50:59,911 | INFO     | current chi2=2.4410045370236717 (change=11.66916835230228 %)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,911 | INFO     | right removable region: 734
[2025-11-24 10:52:06] 2025-11-24 15:50:59,912 | INFO     | sum of square deviations: 125653084430.7837
[2025-11-24 10:52:06] 2025-11-24 15:50:59,924 | INFO     | sum of deviations: 681738589473.6896
[2025-11-24 10:52:06] 2025-11-24 15:50:59,924 | INFO     | mean x: 1763976901.0405405
[2025-11-24 10:52:06] 2025-11-24 15:50:59,924 | INFO     | mean y: 2872343.577027027
[2025-11-24 10:52:06] 2025-11-24 15:50:59,924 | INFO     | intersect: -9567693550.823977
[2025-11-24 10:52:06] 2025-11-24 15:50:59,925 | INFO     | chi2: 4.279618561028494
[2025-11-24 10:52:06] 2025-11-24 15:50:59,925 | INFO     | current chi2=4.279618561028494 (change=33.679507320844316 %)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,926 | INFO     | sum of square deviations: 123123155484.39996
[2025-11-24 10:52:06] 2025-11-24 15:50:59,937 | INFO     | sum of deviations: 623326479656.8856
[2025-11-24 10:52:06] 2025-11-24 15:50:59,937 | INFO     | mean x: 1763977053.5428572
[2025-11-24 10:52:06] 2025-11-24 15:50:59,937 | INFO     | mean y: 2875863.3210884356
[2025-11-24 10:52:06] 2025-11-24 15:50:59,937 | INFO     | intersect: -8927480109.56257
[2025-11-24 10:52:06] 2025-11-24 15:50:59,938 | INFO     | chi2: 4.187172959585094
[2025-11-24 10:52:06] 2025-11-24 15:50:59,938 | INFO     | current chi2=4.187172959585094 (change=2.1601364730314367 %)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,938 | INFO     | left removable region: 20
[2025-11-24 10:52:06] 2025-11-24 15:50:59,939 | INFO     | sum of square deviations: 112868587455.97787
[2025-11-24 10:52:06] 2025-11-24 15:50:59,950 | INFO     | sum of deviations: 857849742945.963
[2025-11-24 10:52:06] 2025-11-24 15:50:59,950 | INFO     | mean x: 1763977023.0532212
[2025-11-24 10:52:06] 2025-11-24 15:50:59,950 | INFO     | mean y: 2900469.211484594
[2025-11-24 10:52:06] 2025-11-24 15:50:59,950 | INFO     | intersect: -13404082553.225956
[2025-11-24 10:52:06] 2025-11-24 15:50:59,951 | INFO     | chi2: 0.09090327975264913
[2025-11-24 10:52:06] 2025-11-24 15:50:59,951 | INFO     | current memory leak: 7.60 B/s (using 714 data points, chi2=0.09)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,951 | INFO     | could have reported an average CPU frequency of 2165 MHz (28 samples)
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | ..............................
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . Timing measurements:
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . get job = 0 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . initial setup = 2 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . payload setup = 8 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . stage-in = 0 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . payload execution = 45396 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,952 | INFO     | . stage-out = 3 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,953 | INFO     | . log creation = 0 s
[2025-11-24 10:52:06] 2025-11-24 15:50:59,953 | INFO     | ..............................
[2025-11-24 10:52:06] 2025-11-24 15:51:00,042 | INFO     | 
[2025-11-24 10:52:06] 2025-11-24 15:51:00,042 | INFO     | job summary report
[2025-11-24 10:52:06] 2025-11-24 15:51:00,042 | INFO     | --------------------------------------------------
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | PanDA job id: 6895334220
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | task id: 47556137
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | errors: (none)
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | pilot state: finished 
[2025-11-24 10:52:06] 2025-11-24 15:51:00,043 | INFO     | transexitcode: 0
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | exeerrorcode: 0
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | exeerrordiag: 
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | exitcode: 0
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | exitmsg: OK
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | cpuconsumptiontime: 351947 s
[2025-11-24 10:52:06] 2025-11-24 15:51:00,044 | INFO     | nevents: 1000
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | neventsw: 0
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | pid: 14022
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | pgrp: 14022
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | corecount: 8
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | event service: False
[2025-11-24 10:52:06] 2025-11-24 15:51:00,045 | INFO     | sizes: {0: 2298756, 6: 2299018, 11: 2299046, 45405: 2345140, 45410: 2354981, 45418: 2355171}
[2025-11-24 10:52:06] 2025-11-24 15:51:00,046 | INFO     | --------------------------------------------------
[2025-11-24 10:52:06] 2025-11-24 15:51:00,046 | INFO     | 
[2025-11-24 10:52:06] 2025-11-24 15:51:00,046 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 10:52:06] 2025-11-24 15:51:00,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,076 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,076 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,078 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,078 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:52:06] 2025-11-24 15:51:00,079 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:52:06] 2025-11-24 15:51:00,080 | INFO     | job 6895334220 has completed (purged errors)
[2025-11-24 10:52:06] 2025-11-24 15:51:00,080 | INFO     | overall cleanup function is called
[2025-11-24 10:52:06] 2025-11-24 15:51:01,091 | INFO     | --- collectZombieJob: --- 10, [14022]
[2025-11-24 10:52:06] 2025-11-24 15:51:01,091 | INFO     | zombie collector waiting for pid 14022
[2025-11-24 10:52:06] 2025-11-24 15:51:01,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:52:06] 2025-11-24 15:51:01,092 | INFO     | collected zombie processes
[2025-11-24 10:52:06] 2025-11-24 15:51:01,092 | INFO     | will attempt to kill all subprocesses of pid=14022
[2025-11-24 10:52:06] 2025-11-24 15:51:01,182 | INFO     | process IDs to be killed: [14022] (in reverse order)
[2025-11-24 10:52:06] 2025-11-24 15:51:01,244 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:52:06] 2025-11-24 15:51:01,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:52:06] 2025-11-24 15:51:01,249 | INFO     | did not find any defunct processes belonging to 14022
[2025-11-24 10:52:06] 2025-11-24 15:51:01,253 | INFO     | did not find any defunct processes belonging to 14022
[2025-11-24 10:52:06] 2025-11-24 15:51:01,256 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:52:06] 2025-11-24 15:51:01,256 | INFO     | ready for new job
[2025-11-24 10:52:06] 2025-11-24 15:51:01,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:52:06] 2025-11-24 15:51:01,261 | INFO     | ***************************************
[2025-11-24 10:52:06] 2025-11-24 15:51:01,261 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:52:06] 2025-11-24 15:51:01,261 | INFO     | ***************************************
[2025-11-24 10:52:06] 2025-11-24 15:51:01,261 | INFO     | 
[2025-11-24 10:52:06] 2025-11-24 15:51:01,262 | INFO     | architecture information:
[2025-11-24 10:52:06] 2025-11-24 15:51:01,263 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:52:06] 2025-11-24 15:51:01,284 | INFO     | cat /etc/os-release:
[2025-11-24 10:52:06] NAME="CentOS Linux"
[2025-11-24 10:52:06] VERSION="7 (Core)"
[2025-11-24 10:52:06] ID="centos"
[2025-11-24 10:52:06] ID_LIKE="rhel fedora"
[2025-11-24 10:52:06] VERSION_ID="7"
[2025-11-24 10:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:52:06] ANSI_COLOR="0;31"
[2025-11-24 10:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:52:06] HOME_URL="https://www.centos.org/"
[2025-11-24 10:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:52:06] 
[2025-11-24 10:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:52:06] 
[2025-11-24 10:52:06] 2025-11-24 15:51:01,284 | INFO     | ***************************************
[2025-11-24 10:52:06] 2025-11-24 15:51:01,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 10:52:06] 2025-11-24 15:51:01,814 | INFO     | sufficient remaining disk space (17426284544 B)
[2025-11-24 10:52:06] 2025-11-24 15:51:01,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:52:06] 2025-11-24 15:51:01,815 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:52:06] 2025-11-24 15:51:01,815 | INFO     | update_server=False
[2025-11-24 10:52:06] 2025-11-24 15:51:01,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:52:06] 2025-11-24 15:51:01,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:52:06] 2025-11-24 15:51:02,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:52:06] 2025-11-24 15:51:02,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:52:06] 2025-11-24 15:51:02,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:52:06] 2025-11-24 15:51:02,756 | INFO     | aborting loop
[2025-11-24 10:52:06] 2025-11-24 15:51:02,797 | INFO     | all data control threads have been joined
[2025-11-24 10:52:06] 2025-11-24 15:51:02,819 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:02,821 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:02,850 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:02,869 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:02,899 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:03,134 | INFO     | [job] validate thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:03,219 | INFO     | all job control threads have been joined
[2025-11-24 10:52:06] 2025-11-24 15:51:03,281 | INFO     | all payload control threads have been joined
[2025-11-24 10:52:06] 2025-11-24 15:51:03,490 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:03,737 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:03,762 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:03,803 | INFO     | [data] control thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:04,022 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:04,131 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:04,225 | INFO     | [job] control thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:04,285 | INFO     | [payload] control thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:04,286 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:06,378 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:52:06] 2025-11-24 15:51:32,536 | INFO     | PID=7549 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 10:52:06] 2025-11-24 15:51:32,536 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:52:06] 2025-11-24 15:51:32,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:52:06] 2025-11-24 15:51:32,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:52:06] 2025-11-24 15:51:59,513 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:52:06] 2025-11-24 15:52:00,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279357867840)>', '<ExcThread(monitor, started 140278304327424)>']
[2025-11-24 10:52:06] 2025-11-24 15:52:01,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:52:06] 2025-11-24 15:52:01,672 | INFO     | [monitor] control thread has ended
[2025-11-24 10:52:06] 2025-11-24 15:52:05,986 | INFO     | all workflow threads have been joined
[2025-11-24 10:52:06] 2025-11-24 15:52:05,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:52:06] 2025-11-24 15:52:05,987 | INFO     | traces error code: 0
[2025-11-24 10:52:06] 2025-11-24 15:52:05,988 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:52:06] 2025-11-24 15:52:06,114 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:52:06] 2025-11-24 15:52:06,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:52:06] 2025-11-24 15:52:06,124 [wrapper] pilotpid: 7549
[2025-11-24 10:52:06] 2025-11-24 15:52:06,128 [wrapper] Pilot exit status: 0
[2025-11-24 10:52:06] 2025-11-24 15:52:06,145 [wrapper] pandaids: 6895334220
[2025-11-24 10:52:06] 2025-11-24 15:52:06,203 [wrapper] cleanup supervisor_pilot 10023 7550
[2025-11-24 10:52:06] 2025-11-24 15:52:06,208 [wrapper] Test setup, not cleaning
[2025-11-24 10:52:06] 2025-11-24 15:52:06,213 [wrapper] apfmon messages muted
[2025-11-24 10:52:06] 2025-11-24 15:52:06,219 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:52:06] 2025-11-24 15:52:06,224 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:52:06]  *** Error codes and diagnostics ***
[2025-11-24 10:52:06]     "exeErrorCode": 0,
[2025-11-24 10:52:06]     "exeErrorDiag": "",
[2025-11-24 10:52:06]     "pilotErrorCode": 0,
[2025-11-24 10:52:06]     "pilotErrorDiag": "",
[2025-11-24 10:52:06]  *** Listing of results directory ***
[2025-11-24 10:52:06] total 1325704
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 21 21:56 pilot3.tar.gz
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 21 22:15 queuedata.json
[2025-11-24 10:52:06] -rwx------ 1 boincer umatlas     36292 Nov 21 22:16 runpilot2-wrapper.sh
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas       100 Nov 23 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:52:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 22:13 run_atlas
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas       105 Nov 23 22:13 job.xml
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas 409273415 Nov 23 22:13 EVNT.47483658._000231.pool.root.1
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 22:13 start_atlas.sh
[2025-11-24 10:52:06] drwxrwx--x 2 boincer umatlas      4096 Nov 23 22:13 shared
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 22:13 input.tar.gz
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas         0 Nov 23 22:13 boinc_lockfile
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 22:13 pandaJob.out
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas        57 Nov 23 22:13 setup.sh.local
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas    989786 Nov 23 22:13 agis_schedconf.cvmfs.json
[2025-11-24 10:52:06] drwx------ 5 boincer umatlas      4096 Nov 23 22:13 pilot3
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas       532 Nov 24 10:42 boinc_task_state.xml
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas      5912 Nov 24 10:46 init_data.xml
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas 927781025 Nov 24 10:50 HITS.47556137._002277.pool.root.1
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas      1075 Nov 24 10:50 memory_monitor_summary.json
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas   1516227 Nov 24 10:50 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas   1996686 Nov 24 10:50 log.47556137._002277.job.log.tgz.1
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas        95 Nov 24 10:50 pilot_heartbeat.json
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas      8672 Nov 24 10:50 heartbeat.json
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas        29 Nov 24 10:51 wrapper_checkpoint.txt
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 10:51 boinc_mmap_file
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas      4745 Nov 24 10:52 pilotlog.txt
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas   6274636 Nov 24 10:52 log.47556137._002277.job.log.1
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas       353 Nov 24 10:52 output.list
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas       620 Nov 24 10:52 runtime_log
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas   8294400 Nov 24 10:52 result.tar.gz
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 10:52 runtime_log.err
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas       668 Nov 24 10:52 hrXKDmxHtg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrtJKDmMKDvTo.diag
[2025-11-24 10:52:06] -rw-r--r-- 1 boincer umatlas     21299 Nov 24 10:52 stderr.txt
[2025-11-24 10:52:06] HITS file was successfully produced:
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas 927781025 Nov 24 10:50 shared/HITS.pool.root.1
[2025-11-24 10:52:06]  *** Contents of shared directory: ***
[2025-11-24 10:52:06] total 1314428
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas 409273415 Nov 23 22:13 ATLAS.root_0
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 22:13 start_atlas.sh
[2025-11-24 10:52:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 23 22:13 input.tar.gz
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas 927781025 Nov 24 10:50 HITS.pool.root.1
[2025-11-24 10:52:06] -rw------- 1 boincer umatlas   8294400 Nov 24 10:52 result.tar.gz
10:52:07 (3813): run_atlas exited; CPU time 347821.947690
10:52:07 (3813): called boinc_finish(0)

</stderr_txt>
]]>

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