Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:18:23 (3636016): wrapper (7.7.26015): starting
00:18:23 (3636016): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 00:18:23] Arguments: --nthreads 2
[2025-11-27 00:18:23] Threads: 2
[2025-11-27 00:18:23] Checking for CVMFS
[2025-11-27 00:18:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:18:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:18:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:18:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:18:23] 2.9.2.0 2254411 11912 61168 153340 2 80 36580636 36864001 0 130560 1 3804544 99.930 591718 745 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 00:18:23] CVMFS is ok
[2025-11-27 00:18:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:18:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:18:23] Further information can be found at the LHC@home message board.
[2025-11-27 00:18:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:18:23] Checking for apptainer binary...
[2025-11-27 00:18:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:18:23] Running /usr/bin/apptainer --version
[2025-11-27 00:18:23] apptainer version 1.4.1-1.1
[2025-11-27 00:18:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:18:23] thA331
[2025-11-27 00:18:23] apptainer works
[2025-11-27 00:18:23] Set ATHENA_PROC_NUMBER=2
[2025-11-27 00:18:23] Set ATHENA_CORE_NUMBER=2
[2025-11-27 00:18:23] Starting ATLAS job with PandaID=6895355253
[2025-11-27 00:18:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:35:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:35:59] 2025-11-27 11:35:28,978 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 12:35:59] 2025-11-27 11:35:28,990 | INFO     | sufficient remaining disk space (220804939776 B)
[2025-11-27 12:35:59] 2025-11-27 11:35:28,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:35:59] 2025-11-27 11:35:28,991 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:35:59] 2025-11-27 11:35:28,991 | INFO     | update_server=False
[2025-11-27 12:35:59] 2025-11-27 11:35:28,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:35:59] 2025-11-27 11:35:28,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:35:59] 2025-11-27 11:35:29,248 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 12:35:59] 2025-11-27 11:35:29,248 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 12:35:59] 2025-11-27 11:35:29,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:35:59] 2025-11-27 11:35:29,248 | INFO     | will abort loop
[2025-11-27 12:35:59] 2025-11-27 11:35:29,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:35:59] 2025-11-27 11:35:29,856 | INFO     | all data control threads have been joined
[2025-11-27 12:35:59] 2025-11-27 11:35:29,997 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:29,997 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,244 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,254 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,411 | INFO     | all job control threads have been joined
[2025-11-27 12:35:59] 2025-11-27 11:35:30,426 | INFO     | all payload control threads have been joined
[2025-11-27 12:35:59] 2025-11-27 11:35:30,701 | INFO     | [job] validate thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,709 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,799 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,861 | INFO     | [data] control thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:30,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:35:59] 2025-11-27 11:35:31,019 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:31,043 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:31,284 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:31,418 | INFO     | [job] control thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:31,432 | INFO     | [payload] control thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:31,473 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:34,992 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:39,206 | INFO     | job.realtimelogging is not enabled
[2025-11-27 12:35:59] 2025-11-27 11:35:40,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:35:59] 2025-11-27 11:35:40,703 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:35:59] 2025-11-27 11:35:42,040 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690546263872)>', '<ExcThread(monitor, started 140689815881472)>']
[2025-11-27 12:35:59] 2025-11-27 11:35:47,065 | INFO     | all workflow threads have been joined
[2025-11-27 12:35:59] 2025-11-27 11:35:47,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:35:59] 2025-11-27 11:35:47,066 | INFO     | traces error code: 0
[2025-11-27 12:35:59] 2025-11-27 11:35:47,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | INFO     | PID=3639724 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:35:59] 2025-11-27 11:35:59,300 | INFO     | [monitor] control thread has ended
[2025-11-27 12:35:59] 2025-11-27 11:35:59,340 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:35:59] 2025-11-27 11:35:59,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:35:59] 2025-11-27 11:35:59,344 [wrapper] pilotpid: 3639724
[2025-11-27 12:35:59] 2025-11-27 11:35:59,347 [wrapper] Pilot exit status: 0
[2025-11-27 12:35:59] 2025-11-27 11:35:59,353 [wrapper] pandaids: 6895355253
[2025-11-27 12:35:59] 2025-11-27 11:35:59,366 [wrapper] cleanup supervisor_pilot 3719041 3639725
[2025-11-27 12:35:59] 2025-11-27 11:35:59,367 [wrapper] Test setup, not cleaning
[2025-11-27 12:35:59] 2025-11-27 11:35:59,369 [wrapper] apfmon messages muted
[2025-11-27 12:35:59] 2025-11-27 11:35:59,371 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:35:59] 2025-11-27 11:35:59,373 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:35:59]  *** Error codes and diagnostics ***
[2025-11-27 12:35:59]     "exeErrorCode": 0,
[2025-11-27 12:35:59]     "exeErrorDiag": "",
[2025-11-27 12:35:59]     "pilotErrorCode": 0,
[2025-11-27 12:35:59]     "pilotErrorDiag": "",
[2025-11-27 12:35:59]  *** Listing of results directory ***
[2025-11-27 12:35:59] total 1307952
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc    576529 Nov 23 07:48 pilot3.tar.gz
[2025-11-27 12:35:59] -rwx------ 1 boinc boinc     36292 Nov 23 08:09 runpilot2-wrapper.sh
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      5112 Nov 23 08:09 queuedata.json
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc       100 Nov 27 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:35:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 00:18 run_atlas
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc       105 Nov 27 00:18 job.xml
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc 408672717 Nov 27 00:18 EVNT.47483658._001145.pool.root.1
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc    590101 Nov 27 00:18 input.tar.gz
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:18 start_atlas.sh
[2025-11-27 12:35:59] drwxrwx--x 2 boinc boinc      4096 Nov 27 00:18 shared
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:18 boinc_setup_complete
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      6207 Nov 27 00:18 init_data.xml
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc         0 Nov 27 00:18 boinc_lockfile
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      2784 Nov 27 00:18 pandaJob.out
[2025-11-27 12:35:59] -rw------- 1 boinc boinc    991538 Nov 27 00:18 agis_schedconf.cvmfs.json
[2025-11-27 12:35:59] drwx------ 5 boinc boinc      4096 Nov 27 00:18 pilot3
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc       531 Nov 27 12:31 boinc_task_state.xml
[2025-11-27 12:35:59] -rw------- 1 boinc boinc 911918517 Nov 27 12:34 HITS.47556149._001320.pool.root.1
[2025-11-27 12:35:59] -rw------- 1 boinc boinc      1021 Nov 27 12:35 memory_monitor_summary.json
[2025-11-27 12:35:59] -rw------- 1 boinc boinc   1516240 Nov 27 12:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:35:59] -rw------- 1 boinc boinc   1221042 Nov 27 12:35 log.47556149._001320.job.log.tgz.1
[2025-11-27 12:35:59] -rw------- 1 boinc boinc      8557 Nov 27 12:35 heartbeat.json
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      8192 Nov 27 12:35 boinc_mmap_file
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc        28 Nov 27 12:35 wrapper_checkpoint.txt
[2025-11-27 12:35:59] -rw------- 1 boinc boinc       747 Nov 27 12:35 pilotlog.txt
[2025-11-27 12:35:59] -rw------- 1 boinc boinc        95 Nov 27 12:35 pilot_heartbeat.json
[2025-11-27 12:35:59] -rw------- 1 boinc boinc   6204539 Nov 27 12:35 log.47556149._001320.job.log.1
[2025-11-27 12:35:59] -rw------- 1 boinc boinc       353 Nov 27 12:35 output.list
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc       620 Nov 27 12:35 runtime_log
[2025-11-27 12:35:59] -rw------- 1 boinc boinc   7444480 Nov 27 12:35 result.tar.gz
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      8898 Nov 27 12:35 runtime_log.err
[2025-11-27 12:35:59] -rw------- 1 boinc boinc       665 Nov 27 12:35 UpWMDmJPJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPiKKDmFA0Qon.diag
[2025-11-27 12:35:59] -rw-r--r-- 1 boinc boinc      8187 Nov 27 12:35 stderr.txt
[2025-11-27 12:35:59] HITS file was successfully produced:
[2025-11-27 12:35:59] -rw------- 1 boinc boinc 911918517 Nov 27 12:34 shared/HITS.pool.root.1
[2025-11-27 12:35:59]  *** Contents of shared directory: ***
[2025-11-27 12:35:59] total 1297520
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc 408672717 Nov 27 00:18 ATLAS.root_0
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc    590101 Nov 27 00:18 input.tar.gz
[2025-11-27 12:35:59] -rw-r--r-- 2 boinc boinc     15847 Nov 27 00:18 start_atlas.sh
[2025-11-27 12:35:59] -rw------- 1 boinc boinc 911918517 Nov 27 12:34 HITS.pool.root.1
[2025-11-27 12:35:59] -rw------- 1 boinc boinc   7444480 Nov 27 12:35 result.tar.gz
12:36:01 (3636016): run_atlas exited; CPU time 87608.332920
12:36:01 (3636016): called boinc_finish(0)

</stderr_txt>
]]>

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