Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:32:48 (23747): wrapper (7.7.26015): starting
16:32:48 (23747): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:32:48] Arguments: --nthreads 8
[2025-11-26 16:32:48] Threads: 8
[2025-11-26 16:32:48] Checking for CVMFS
[2025-11-26 16:32:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:32:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:32:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:32:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:32:50] 2.11.2.0 24698 172360 145032 153326 2 85 12651753 25165824 1288 130560 18 59535574 99.902 28546169 2037 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 16:32:50] CVMFS is ok
[2025-11-26 16:32:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:32:50] Checking for apptainer binary...
[2025-11-26 16:32:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:32:50] Running /usr/bin/apptainer --version
[2025-11-26 16:32:51] apptainer version 1.3.2-1.el7
[2025-11-26 16:32:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:33:20] cg-vwn342.simple-grid.lan
[2025-11-26 16:33:20] apptainer works
[2025-11-26 16:33:20] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:33:20] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:33:20] Starting ATLAS job with PandaID=6895348427
[2025-11-26 16:33:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:57:43]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:57:43] 2025-11-27 14:57:02,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:57:43] 2025-11-27 14:57:02,108 | INFO     | time since job start (83999s) is within the limit (172800.0s)
[2025-11-27 15:57:43] 2025-11-27 14:57:03,292 | INFO     | PID=27566 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:57:43] 2025-11-27 14:57:03,292 | INFO     | .. there are 9 such processes running
[2025-11-27 15:57:43] 2025-11-27 14:57:04,293 | INFO     | time since job start (84001s) is within the limit (172800.0s)
[2025-11-27 15:57:43] 2025-11-27 14:57:04,545 | INFO     | monitor loop #5661: job 0:6895348427 is in state 'finished'
[2025-11-27 15:57:43] 2025-11-27 14:57:04,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,078 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 15:57:43] 2025-11-27 14:57:06,080 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 15:57:43] 2025-11-27 14:57:06,082 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895348427/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,083 | INFO     | extracted standard info from prmon json
[2025-11-27 15:57:43] 2025-11-27 14:57:06,083 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:57:43] 2025-11-27 14:57:06,083 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:57:43] 2025-11-27 14:57:06,124 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:57:43] 2025-11-27 14:57:06,126 | INFO     | sum of square deviations: 793845459865.1555
[2025-11-27 15:57:43] 2025-11-27 14:57:06,214 | INFO     | sum of deviations: 3662118867169.8726
[2025-11-27 15:57:43] 2025-11-27 14:57:06,215 | INFO     | mean x: 1764213618.5804093
[2025-11-27 15:57:43] 2025-11-27 14:57:06,215 | INFO     | mean y: 2852544.5921052634
[2025-11-27 15:57:43] 2025-11-27 14:57:06,215 | INFO     | intersect: -8135708806.402823
[2025-11-27 15:57:43] 2025-11-27 14:57:06,217 | INFO     | chi2: 19.156005277347482
[2025-11-27 15:57:43] 2025-11-27 14:57:06,219 | INFO     | sum of square deviations: 785173227109.2971
[2025-11-27 15:57:43] 2025-11-27 14:57:06,277 | INFO     | sum of deviations: 4116134083032.554
[2025-11-27 15:57:43] 2025-11-27 14:57:06,278 | INFO     | mean x: 1764213466.0843728
[2025-11-27 15:57:43] 2025-11-27 14:57:06,278 | INFO     | mean y: 2860527.247248716
[2025-11-27 15:57:43] 2025-11-27 14:57:06,278 | INFO     | intersect: -9245721730.491959
[2025-11-27 15:57:43] 2025-11-27 14:57:06,279 | INFO     | chi2: 16.014020439770356
[2025-11-27 15:57:43] 2025-11-27 14:57:06,280 | INFO     | current chi2=16.014020439770356 (change=16.402087972342606 %)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,280 | INFO     | right removable region: 1362
[2025-11-27 15:57:43] 2025-11-27 14:57:06,282 | INFO     | sum of square deviations: 785172325529.2971
[2025-11-27 15:57:43] 2025-11-27 14:57:06,316 | INFO     | time since job start (84003s) is within the limit (172800.0s)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,349 | INFO     | sum of deviations: 3083316962254.6465
[2025-11-27 15:57:43] 2025-11-27 14:57:06,350 | INFO     | mean x: 1764213771.0843728
[2025-11-27 15:57:43] 2025-11-27 14:57:06,350 | INFO     | mean y: 2862721.368305209
[2025-11-27 15:57:43] 2025-11-27 14:57:06,350 | INFO     | intersect: -6925081716.511292
[2025-11-27 15:57:43] 2025-11-27 14:57:06,352 | INFO     | chi2: 14.355975588520906
[2025-11-27 15:57:43] 2025-11-27 14:57:06,352 | INFO     | current chi2=14.355975588520906 (change=25.05757134292893 %)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,354 | INFO     | sum of square deviations: 776562587730.896
[2025-11-27 15:57:43] 2025-11-27 14:57:06,411 | INFO     | sum of deviations: 2594350312094.6157
[2025-11-27 15:57:43] 2025-11-27 14:57:06,411 | INFO     | mean x: 1764213923.5883653
[2025-11-27 15:57:43] 2025-11-27 14:57:06,411 | INFO     | mean y: 2871381.17820324
[2025-11-27 15:57:43] 2025-11-27 14:57:06,411 | INFO     | intersect: -5891037256.1629715
[2025-11-27 15:57:43] 2025-11-27 14:57:06,413 | INFO     | chi2: 11.053324715805555
[2025-11-27 15:57:43] 2025-11-27 14:57:06,413 | INFO     | current chi2=11.053324715805555 (change=23.005408809389195 %)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,413 | INFO     | left removable region: 20
[2025-11-27 15:57:43] 2025-11-27 14:57:06,415 | INFO     | sum of square deviations: 749436235356.7128
[2025-11-27 15:57:43] 2025-11-27 14:57:06,473 | INFO     | sum of deviations: 2646303883708.047
[2025-11-27 15:57:43] 2025-11-27 14:57:06,473 | INFO     | mean x: 1764214045.5976155
[2025-11-27 15:57:43] 2025-11-27 14:57:06,474 | INFO     | mean y: 2890365.888971684
[2025-11-27 15:57:43] 2025-11-27 14:57:06,474 | INFO     | intersect: -6226654270.867346
[2025-11-27 15:57:43] 2025-11-27 14:57:06,475 | INFO     | chi2: 4.792248894828781
[2025-11-27 15:57:43] 2025-11-27 14:57:06,476 | INFO     | current memory leak: 3.53 B/s (using 1342 data points, chi2=4.79)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,477 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 15:57:43] 2025-11-27 14:57:06,477 | INFO     | ..............................
[2025-11-27 15:57:43] 2025-11-27 14:57:06,477 | INFO     | . Timing measurements:
[2025-11-27 15:57:43] 2025-11-27 14:57:06,477 | INFO     | . get job = 0 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . initial setup = 5 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . payload setup = 156 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . stage-in = 0 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . payload execution = 83569 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . stage-out = 4 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | . log creation = 1 s
[2025-11-27 15:57:43] 2025-11-27 14:57:06,478 | INFO     | ..............................
[2025-11-27 15:57:43] 2025-11-27 14:57:07,050 | INFO     | 
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | job summary report
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | --------------------------------------------------
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | PanDA job id: 6895348427
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | task id: 47556137
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | errors: (none)
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | pilot state: finished 
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | transexitcode: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:07,051 | INFO     | exeerrorcode: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | exeerrordiag: 
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | exitcode: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | exitmsg: OK
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | cpuconsumptiontime: 316326 s
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | nevents: 1000
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | neventsw: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | pid: 1737
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | pgrp: 1737
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | corecount: 8
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | event service: False
[2025-11-27 15:57:43] 2025-11-27 14:57:07,052 | INFO     | sizes: {0: 2283986, 1: 2284070, 2: 2284269, 13: 2284269, 23: 2284325, 34: 2284353, 45: 2284509, 56: 2284537, 66: 2284565, 77: 2284593, 83: 2284911, 88: 2285247, 83
[2025-11-27 15:57:43] 2025-11-27 14:57:07,053 | INFO     | --------------------------------------------------
[2025-11-27 15:57:43] 2025-11-27 14:57:07,053 | INFO     | 
[2025-11-27 15:57:43] 2025-11-27 14:57:07,053 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-27 15:57:43] 2025-11-27 14:57:07,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | job 6895348427 has completed (purged errors)
[2025-11-27 15:57:43] 2025-11-27 14:57:07,741 | INFO     | overall cleanup function is called
[2025-11-27 15:57:43] 2025-11-27 14:57:08,758 | INFO     | --- collectZombieJob: --- 10, [1737]
[2025-11-27 15:57:43] 2025-11-27 14:57:08,759 | INFO     | zombie collector waiting for pid 1737
[2025-11-27 15:57:43] 2025-11-27 14:57:08,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:57:43] 2025-11-27 14:57:08,759 | INFO     | collected zombie processes
[2025-11-27 15:57:43] 2025-11-27 14:57:08,759 | INFO     | will attempt to kill all subprocesses of pid=1737
[2025-11-27 15:57:43] 2025-11-27 14:57:08,859 | INFO     | process IDs to be killed: [1737] (in reverse order)
[2025-11-27 15:57:43] 2025-11-27 14:57:09,786 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:57:43] 2025-11-27 14:57:09,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:57:43] 2025-11-27 14:57:09,790 | INFO     | did not find any defunct processes belonging to 1737
[2025-11-27 15:57:43] 2025-11-27 14:57:09,792 | INFO     | did not find any defunct processes belonging to 1737
[2025-11-27 15:57:43] 2025-11-27 14:57:09,831 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:57:43] 2025-11-27 14:57:09,831 | INFO     | ready for new job
[2025-11-27 15:57:43] 2025-11-27 14:57:09,831 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:57:43] 2025-11-27 14:57:09,836 | INFO     | ***************************************
[2025-11-27 15:57:43] 2025-11-27 14:57:09,836 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:57:43] 2025-11-27 14:57:09,836 | INFO     | ***************************************
[2025-11-27 15:57:43] 2025-11-27 14:57:09,836 | INFO     | 
[2025-11-27 15:57:43] 2025-11-27 14:57:09,837 | INFO     | pilot is running in a VM
[2025-11-27 15:57:43] 2025-11-27 14:57:09,837 | INFO     | architecture information:
[2025-11-27 15:57:43] 2025-11-27 14:57:09,841 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:57:43] 2025-11-27 14:57:10,089 | INFO     | cat /etc/os-release:
[2025-11-27 15:57:43] NAME="CentOS Linux"
[2025-11-27 15:57:43] VERSION="7 (Core)"
[2025-11-27 15:57:43] ID="centos"
[2025-11-27 15:57:43] ID_LIKE="rhel fedora"
[2025-11-27 15:57:43] VERSION_ID="7"
[2025-11-27 15:57:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:57:43] ANSI_COLOR="0;31"
[2025-11-27 15:57:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:57:43] HOME_URL="https://www.centos.org/"
[2025-11-27 15:57:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:57:43] 
[2025-11-27 15:57:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:57:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:57:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:57:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:57:43] 
[2025-11-27 15:57:43] 2025-11-27 14:57:10,089 | INFO     | ***************************************
[2025-11-27 15:57:43] 2025-11-27 14:57:10,593 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-27 15:57:43] 2025-11-27 14:57:10,757 | INFO     | sufficient remaining disk space (495074672640 B)
[2025-11-27 15:57:43] 2025-11-27 14:57:10,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:57:43] 2025-11-27 14:57:10,757 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:57:43] 2025-11-27 14:57:10,758 | INFO     | update_server=False
[2025-11-27 15:57:43] 2025-11-27 14:57:10,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:57:43] 2025-11-27 14:57:10,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:57:43] 2025-11-27 14:57:10,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:43] 2025-11-27 14:57:10,762 | INFO     | aborting loop
[2025-11-27 15:57:43] 2025-11-27 14:57:10,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:57:43] 2025-11-27 14:57:10,886 | INFO     | all payload control threads have been joined
[2025-11-27 15:57:43] 2025-11-27 14:57:11,543 | INFO     | all job control threads have been joined
[2025-11-27 15:57:43] 2025-11-27 14:57:11,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:57:43] 2025-11-27 14:57:11,650 | INFO     | all data control threads have been joined
[2025-11-27 15:57:43] 2025-11-27 14:57:11,764 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:11,768 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:11,839 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:11,893 | INFO     | [payload] control thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,308 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,462 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,550 | INFO     | [job] control thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,615 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,657 | INFO     | [data] control thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,801 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:12,967 | INFO     | [job] validate thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:13,052 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:13,202 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:13,226 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:14,767 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:21,123 | INFO     | job.realtimelogging is not enabled
[2025-11-27 15:57:43] 2025-11-27 14:57:22,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:57:43] 2025-11-27 14:57:29,203 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:57:43] 2025-11-27 14:57:30,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843947755328)>', '<ExcThread(monitor, started 139843505997568)>']
[2025-11-27 15:57:43] 2025-11-27 14:57:35,684 | INFO     | all workflow threads have been joined
[2025-11-27 15:57:43] 2025-11-27 14:57:35,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:57:43] 2025-11-27 14:57:35,685 | INFO     | traces error code: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:35,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:57:43] 2025-11-27 14:57:39,486 | INFO     | PID=27566 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 15:57:43] 2025-11-27 14:57:39,487 | INFO     | .. there are 9 such processes running
[2025-11-27 15:57:43] 2025-11-27 14:57:39,488 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:57:43] 2025-11-27 14:57:39,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:57:43] 2025-11-27 14:57:39,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:57:43] 2025-11-27 14:57:39,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:57:43] 2025-11-27 14:57:39,489 | INFO     | [monitor] control thread has ended
[2025-11-27 15:57:43] 2025-11-27 14:57:39,618 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:57:43] 2025-11-27 14:57:39,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:57:43] 2025-11-27 14:57:39,738 [wrapper] pilotpid: 27566
[2025-11-27 15:57:43] 2025-11-27 14:57:39,830 [wrapper] Pilot exit status: 0
[2025-11-27 15:57:43] 2025-11-27 14:57:40,227 [wrapper] pandaids: 6895348427
[2025-11-27 15:57:43] 2025-11-27 14:57:41,231 [wrapper] cleanup supervisor_pilot  4871 27567
[2025-11-27 15:57:43] 2025-11-27 14:57:41,316 [wrapper] Test setup, not cleaning
[2025-11-27 15:57:43] 2025-11-27 14:57:41,397 [wrapper] apfmon messages muted
[2025-11-27 15:57:43] 2025-11-27 14:57:41,498 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:57:43] 2025-11-27 14:57:41,604 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:57:43]  *** Error codes and diagnostics ***
[2025-11-27 15:57:43]     "exeErrorCode": 0,
[2025-11-27 15:57:43]     "exeErrorDiag": "",
[2025-11-27 15:57:43]     "pilotErrorCode": 0,
[2025-11-27 15:57:43]     "pilotErrorDiag": "",
[2025-11-27 15:57:43]  *** Listing of results directory ***
[2025-11-27 15:57:43] total 1329652
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc    576529 Nov 22 20:25 pilot3.tar.gz
[2025-11-27 15:57:43] -rwx------. 1 boinc boinc     36292 Nov 22 20:50 runpilot2-wrapper.sh
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc      5112 Nov 22 20:50 queuedata.json
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc       100 Nov 26 16:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:57:43] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 16:32 run_atlas
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc       105 Nov 26 16:32 job.xml
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc      6391 Nov 26 16:32 init_data.xml
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc 411983703 Nov 26 16:32 EVNT.47483658._000479.pool.root.1
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:32 start_atlas.sh
[2025-11-27 15:57:43] drwxrwx--x. 2 boinc boinc        68 Nov 26 16:32 shared
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc    590094 Nov 26 16:32 input.tar.gz
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc         0 Nov 26 16:32 boinc_lockfile
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc      2784 Nov 26 16:33 pandaJob.out
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc    991855 Nov 26 16:37 agis_schedconf.cvmfs.json
[2025-11-27 15:57:43] drwx------. 5 boinc boinc      4096 Nov 26 16:37 pilot3
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc       533 Nov 27 15:38 boinc_task_state.xml
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc 918435250 Nov 27 15:54 HITS.47556137._004742.pool.root.1
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc      1028 Nov 27 15:55 memory_monitor_summary.json
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc   1516240 Nov 27 15:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc   2446802 Nov 27 15:55 log.47556137._004742.job.log.tgz.1
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc      8626 Nov 27 15:57 heartbeat.json
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc        29 Nov 27 15:57 wrapper_checkpoint.txt
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc      8192 Nov 27 15:57 boinc_mmap_file
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc        95 Nov 27 15:57 pilot_heartbeat.json
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc       820 Nov 27 15:57 pilotlog.txt
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc  11175215 Nov 27 15:57 log.47556137._004742.job.log.1
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc       353 Nov 27 15:57 output.list
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc       620 Nov 27 15:57 runtime_log
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc  13639680 Nov 27 15:57 result.tar.gz
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc       662 Nov 27 15:57 Ul4NDmdn8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLMKKDmb46rHo.diag
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc      8817 Nov 27 15:57 runtime_log.err
[2025-11-27 15:57:43] -rw-r--r--. 1 boinc boinc     21254 Nov 27 15:57 stderr.txt
[2025-11-27 15:57:43] HITS file was successfully produced:
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc 918435250 Nov 27 15:54 shared/HITS.pool.root.1
[2025-11-27 15:57:43]  *** Contents of shared directory: ***
[2025-11-27 15:57:43] total 1313156
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc 411983703 Nov 26 16:32 ATLAS.root_0
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:32 start_atlas.sh
[2025-11-27 15:57:43] -rw-r--r--. 2 boinc boinc    590094 Nov 26 16:32 input.tar.gz
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc 918435250 Nov 27 15:54 HITS.pool.root.1
[2025-11-27 15:57:43] -rw-------. 1 boinc boinc  13639680 Nov 27 15:57 result.tar.gz
15:57:45 (23747): run_atlas exited; CPU time 316898.583381
15:57:45 (23747): called boinc_finish(0)

</stderr_txt>
]]>

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