Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:35 (25688): wrapper (7.7.26015): starting
21:25:35 (25688): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 21:25:35] Arguments: --nthreads 12
[2025-11-23 21:25:35] Threads: 12
[2025-11-23 21:25:35] Checking for CVMFS
[2025-11-23 21:25:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:25:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:25:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:25:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:25:35] 2.11.2.0 2998 284153 94468 153229 3 81 13585947 20275201 1 130560 1 128045630 99.967 16779995 14453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 21:25:35] CVMFS is ok
[2025-11-23 21:25:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:25:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:25:35] Further information can be found at the LHC@home message board.
[2025-11-23 21:25:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:25:35] Checking for apptainer binary...
[2025-11-23 21:25:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:25:35] Running /usr/bin/apptainer --version
[2025-11-23 21:25:35] apptainer version 1.3.2-1.el7
[2025-11-23 21:25:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:25:36] c-205-25.aglt2.org
[2025-11-23 21:25:36] apptainer works
[2025-11-23 21:25:36] Set ATHENA_PROC_NUMBER=12
[2025-11-23 21:25:36] Set ATHENA_CORE_NUMBER=12
[2025-11-23 21:25:36] Starting ATLAS job with PandaID=6895348321
[2025-11-23 21:25:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:40:40]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:40:40] 2025-11-24 09:39:53,318 | INFO     | time since job start (26042s) is within the limit (172800.0s)
[2025-11-24 04:40:40] 2025-11-24 09:39:54,131 | INFO     | monitor loop #1951: job 0:6895348321 is in state 'finished'
[2025-11-24 04:40:40] 2025-11-24 09:39:54,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,218 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 04:40:40] 2025-11-24 09:39:55,222 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 04:40:40] 2025-11-24 09:39:55,224 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895348321/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,225 | INFO     | extracted standard info from prmon json
[2025-11-24 04:40:40] 2025-11-24 09:39:55,225 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:40:40] 2025-11-24 09:39:55,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:40:40] 2025-11-24 09:39:55,232 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:40:40] 2025-11-24 09:39:55,233 | INFO     | sum of square deviations: 24141137058.965076
[2025-11-24 04:40:40] 2025-11-24 09:39:55,237 | INFO     | sum of deviations: 332755460997.843
[2025-11-24 04:40:40] 2025-11-24 09:39:55,237 | INFO     | mean x: 1763964173.2271662
[2025-11-24 04:40:40] 2025-11-24 09:39:55,237 | INFO     | mean y: 3432558.5480093677
[2025-11-24 04:40:40] 2025-11-24 09:39:55,237 | INFO     | intersect: -24310613221.988556
[2025-11-24 04:40:40] 2025-11-24 09:39:55,238 | INFO     | chi2: 6.255832351850514
[2025-11-24 04:40:40] 2025-11-24 09:39:55,238 | INFO     | sum of square deviations: 23303002091.20374
[2025-11-24 04:40:40] 2025-11-24 09:39:55,242 | INFO     | sum of deviations: 506595344504.4741
[2025-11-24 04:40:40] 2025-11-24 09:39:55,242 | INFO     | mean x: 1763964020.729858
[2025-11-24 04:40:40] 2025-11-24 09:39:55,242 | INFO     | mean y: 3464160.732227488
[2025-11-24 04:40:40] 2025-11-24 09:39:55,243 | INFO     | intersect: -38344211270.85758
[2025-11-24 04:40:40] 2025-11-24 09:39:55,243 | INFO     | chi2: 2.8941292826405567
[2025-11-24 04:40:40] 2025-11-24 09:39:55,243 | INFO     | current chi2=2.8941292826405567 (change=53.737102916697324 %)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,244 | INFO     | sum of square deviations: 22484495398.43652
[2025-11-24 04:40:40] 2025-11-24 09:39:55,247 | INFO     | sum of deviations: 562316216472.5563
[2025-11-24 04:40:40] 2025-11-24 09:39:55,247 | INFO     | mean x: 1763963868.2326138
[2025-11-24 04:40:40] 2025-11-24 09:39:55,248 | INFO     | mean y: 3474486.076738609
[2025-11-24 04:40:40] 2025-11-24 09:39:55,248 | INFO     | intersect: -44111613302.2768
[2025-11-24 04:40:40] 2025-11-24 09:39:55,248 | INFO     | chi2: 2.2435968554096877
[2025-11-24 04:40:40] 2025-11-24 09:39:55,249 | INFO     | current chi2=2.2435968554096877 (change=22.477656099638153 %)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,249 | INFO     | right removable region: 416
[2025-11-24 04:40:40] 2025-11-24 09:39:55,249 | INFO     | sum of square deviations: 23302942921.203762
[2025-11-24 04:40:40] 2025-11-24 09:39:55,253 | INFO     | sum of deviations: 203606219469.8057
[2025-11-24 04:40:40] 2025-11-24 09:39:55,253 | INFO     | mean x: 1763964325.729858
[2025-11-24 04:40:40] 2025-11-24 09:39:55,253 | INFO     | mean y: 3455971.0947867297
[2025-11-24 04:40:40] 2025-11-24 09:39:55,253 | INFO     | intersect: -15408936740.671267
[2025-11-24 04:40:40] 2025-11-24 09:39:55,254 | INFO     | chi2: 4.162096513713759
[2025-11-24 04:40:40] 2025-11-24 09:39:55,254 | INFO     | current chi2=4.162096513713759 (change=33.46854136072581 %)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,254 | INFO     | sum of square deviations: 22484428175.357384
[2025-11-24 04:40:40] 2025-11-24 09:39:55,258 | INFO     | sum of deviations: 170697728814.38843
[2025-11-24 04:40:40] 2025-11-24 09:39:55,258 | INFO     | mean x: 1763964478.2278178
[2025-11-24 04:40:40] 2025-11-24 09:39:55,258 | INFO     | mean y: 3462096.690647482
[2025-11-24 04:40:40] 2025-11-24 09:39:55,258 | INFO     | intersect: -13388238496.911852
[2025-11-24 04:40:40] 2025-11-24 09:39:55,259 | INFO     | chi2: 4.1069645132960115
[2025-11-24 04:40:40] 2025-11-24 09:39:55,259 | INFO     | current chi2=4.1069645132960115 (change=1.3246209028572935 %)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,259 | INFO     | left removable region: 20
[2025-11-24 04:40:40] 2025-11-24 09:39:55,260 | INFO     | sum of square deviations: 19255748619.626274
[2025-11-24 04:40:40] 2025-11-24 09:39:55,263 | INFO     | sum of deviations: 356527998211.0757
[2025-11-24 04:40:40] 2025-11-24 09:39:55,263 | INFO     | mean x: 1763964447.7323232
[2025-11-24 04:40:40] 2025-11-24 09:39:55,263 | INFO     | mean y: 3513438.1893939395
[2025-11-24 04:40:40] 2025-11-24 09:39:55,263 | INFO     | intersect: -32657003994.22591
[2025-11-24 04:40:40] 2025-11-24 09:39:55,264 | INFO     | chi2: 0.0361680857837906
[2025-11-24 04:40:40] 2025-11-24 09:39:55,264 | INFO     | current memory leak: 18.52 B/s (using 396 data points, chi2=0.04)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,264 | INFO     | could have reported an average CPU frequency of 2358 MHz (18 samples)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,264 | INFO     | ..............................
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . Timing measurements:
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . get job = 0 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . initial setup = 2 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . payload setup = 7 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . stage-in = 0 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . payload execution = 26005 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . stage-out = 3 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | . log creation = 0 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,265 | INFO     | ..............................
[2025-11-24 04:40:40] 2025-11-24 09:39:55,328 | INFO     | time since job start (26044s) is within the limit (172800.0s)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,348 | INFO     | 
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | job summary report
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | --------------------------------------------------
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | PanDA job id: 6895348321
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | task id: 47556137
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | errors: (none)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | pilot state: finished 
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | transexitcode: 0
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | exeerrorcode: 0
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | exeerrordiag: 
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | exitcode: 0
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | exitmsg: OK
[2025-11-24 04:40:40] 2025-11-24 09:39:55,350 | INFO     | cpuconsumptiontime: 298271 s
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | nevents: 1000
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | neventsw: 0
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | pid: 3507
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | pgrp: 3507
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | corecount: 12
[2025-11-24 04:40:40] 2025-11-24 09:39:55,351 | INFO     | event service: False
[2025-11-24 04:40:40] 2025-11-24 09:39:55,352 | INFO     | sizes: {0: 2298756, 5: 2299018, 11: 2299074, 26016: 2336394, 26020: 2345444, 26027: 2345634}
[2025-11-24 04:40:40] 2025-11-24 09:39:55,352 | INFO     | --------------------------------------------------
[2025-11-24 04:40:40] 2025-11-24 09:39:55,352 | INFO     | 
[2025-11-24 04:40:40] 2025-11-24 09:39:55,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 04:40:40] 2025-11-24 09:39:55,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,374 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,378 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:40:40] 2025-11-24 09:39:55,378 | INFO     | job 6895348321 has completed (purged errors)
[2025-11-24 04:40:40] 2025-11-24 09:39:55,378 | INFO     | overall cleanup function is called
[2025-11-24 04:40:40] 2025-11-24 09:39:56,395 | INFO     | --- collectZombieJob: --- 10, [3507]
[2025-11-24 04:40:40] 2025-11-24 09:39:56,395 | INFO     | zombie collector waiting for pid 3507
[2025-11-24 04:40:40] 2025-11-24 09:39:56,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:40:40] 2025-11-24 09:39:56,395 | INFO     | collected zombie processes
[2025-11-24 04:40:40] 2025-11-24 09:39:56,395 | INFO     | will attempt to kill all subprocesses of pid=3507
[2025-11-24 04:40:40] 2025-11-24 09:39:56,489 | INFO     | process IDs to be killed: [3507] (in reverse order)
[2025-11-24 04:40:40] 2025-11-24 09:39:56,554 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:40:40] 2025-11-24 09:39:56,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:40:40] 2025-11-24 09:39:56,557 | INFO     | did not find any defunct processes belonging to 3507
[2025-11-24 04:40:40] 2025-11-24 09:39:56,559 | INFO     | did not find any defunct processes belonging to 3507
[2025-11-24 04:40:40] 2025-11-24 09:39:56,562 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:40:40] 2025-11-24 09:39:56,562 | INFO     | ready for new job
[2025-11-24 04:40:40] 2025-11-24 09:39:56,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:40:40] 2025-11-24 09:39:56,564 | INFO     | ***************************************
[2025-11-24 04:40:40] 2025-11-24 09:39:56,564 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:40:40] 2025-11-24 09:39:56,565 | INFO     | ***************************************
[2025-11-24 04:40:40] 2025-11-24 09:39:56,565 | INFO     | 
[2025-11-24 04:40:40] 2025-11-24 09:39:56,565 | INFO     | architecture information:
[2025-11-24 04:40:40] 2025-11-24 09:39:56,566 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:40:40] 2025-11-24 09:39:56,582 | INFO     | cat /etc/os-release:
[2025-11-24 04:40:40] NAME="CentOS Linux"
[2025-11-24 04:40:40] VERSION="7 (Core)"
[2025-11-24 04:40:40] ID="centos"
[2025-11-24 04:40:40] ID_LIKE="rhel fedora"
[2025-11-24 04:40:40] VERSION_ID="7"
[2025-11-24 04:40:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:40:40] ANSI_COLOR="0;31"
[2025-11-24 04:40:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:40:40] HOME_URL="https://www.centos.org/"
[2025-11-24 04:40:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:40:40] 
[2025-11-24 04:40:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:40:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:40:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:40:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:40:40] 
[2025-11-24 04:40:40] 2025-11-24 09:39:56,582 | INFO     | ***************************************
[2025-11-24 04:40:40] 2025-11-24 09:39:57,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 04:40:40] 2025-11-24 09:39:57,102 | INFO     | sufficient remaining disk space (28244443136 B)
[2025-11-24 04:40:40] 2025-11-24 09:39:57,102 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:40:40] 2025-11-24 09:39:57,102 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:40:40] 2025-11-24 09:39:57,102 | INFO     | update_server=False
[2025-11-24 04:40:40] 2025-11-24 09:39:57,102 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:40:40] 2025-11-24 09:39:57,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:40:40] 2025-11-24 09:39:57,103 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 04:40:40] 2025-11-24 09:39:57,103 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:40:40] 2025-11-24 09:39:57,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:40:40] 2025-11-24 09:39:57,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:40:40] 2025-11-24 09:39:57,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:40:40] 2025-11-24 09:39:57,639 | INFO     | aborting loop
[2025-11-24 04:40:40] 2025-11-24 09:39:57,659 | INFO     | all payload control threads have been joined
[2025-11-24 04:40:40] 2025-11-24 09:39:57,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:40:40] 2025-11-24 09:39:58,061 | INFO     | all job control threads have been joined
[2025-11-24 04:40:40] 2025-11-24 09:39:58,108 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,108 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,194 | INFO     | all data control threads have been joined
[2025-11-24 04:40:40] 2025-11-24 09:39:58,223 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,269 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:40:40] 2025-11-24 09:39:58,645 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,665 | INFO     | [payload] control thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:58,996 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,000 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,065 | INFO     | [job] control thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,198 | INFO     | [data] control thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,204 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,498 | INFO     | [job] validate thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,562 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:39:59,992 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:40:02,352 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:40:40] 2025-11-24 09:40:33,669 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:40:40] 2025-11-24 09:40:34,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335246026560)>', '<ExcThread(monitor, started 140334809990912)>']
[2025-11-24 04:40:40] 2025-11-24 09:40:35,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:40:40] 2025-11-24 09:40:35,281 | INFO     | [monitor] control thread has ended
[2025-11-24 04:40:40] 2025-11-24 09:40:39,700 | INFO     | all workflow threads have been joined
[2025-11-24 04:40:40] 2025-11-24 09:40:39,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:40:40] 2025-11-24 09:40:39,701 | INFO     | traces error code: 0
[2025-11-24 04:40:40] 2025-11-24 09:40:39,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:40:40] 2025-11-24 09:40:39,804 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:40:40] 2025-11-24 09:40:39,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:40:40] 2025-11-24 09:40:39,812 [wrapper] pilotpid: 29372
[2025-11-24 04:40:40] 2025-11-24 09:40:39,816 [wrapper] Pilot exit status: 0
[2025-11-24 04:40:40] 2025-11-24 09:40:39,830 [wrapper] pandaids: 6895348321
[2025-11-24 04:40:40] 2025-11-24 09:40:39,877 [wrapper] cleanup supervisor_pilot 18888 29373
[2025-11-24 04:40:40] 2025-11-24 09:40:39,881 [wrapper] Test setup, not cleaning
[2025-11-24 04:40:40] 2025-11-24 09:40:39,885 [wrapper] apfmon messages muted
[2025-11-24 04:40:40] 2025-11-24 09:40:39,889 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:40:40] 2025-11-24 09:40:39,893 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:40:40]  *** Error codes and diagnostics ***
[2025-11-24 04:40:40]     "exeErrorCode": 0,
[2025-11-24 04:40:40]     "exeErrorDiag": "",
[2025-11-24 04:40:40]     "pilotErrorCode": 0,
[2025-11-24 04:40:40]     "pilotErrorDiag": "",
[2025-11-24 04:40:40]  *** Listing of results directory ***
[2025-11-24 04:40:40] total 1313756
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:39 queuedata.json
[2025-11-24 04:40:40] -rwx------ 1 boincer umatlas     36292 Nov 22 14:40 runpilot2-wrapper.sh
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas       100 Nov 23 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:40:40] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 21:25 run_atlas
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas       105 Nov 23 21:25 job.xml
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas 412358900 Nov 23 21:25 EVNT.47483658._000476.pool.root.1
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 21:25 start_atlas.sh
[2025-11-24 04:40:40] drwxrwx--x 2 boincer umatlas      4096 Nov 23 21:25 shared
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas    590096 Nov 23 21:25 input.tar.gz
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas         0 Nov 23 21:25 boinc_lockfile
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 21:25 pandaJob.out
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas        57 Nov 23 21:25 setup.sh.local
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas    989786 Nov 23 21:25 agis_schedconf.cvmfs.json
[2025-11-24 04:40:40] drwx------ 5 boincer umatlas      4096 Nov 23 21:25 pilot3
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas       533 Nov 24 04:30 boinc_task_state.xml
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 04:36 init_data.xml
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas        95 Nov 24 04:38 pilot_heartbeat.json
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas 917388036 Nov 24 04:39 HITS.47556137._004712.pool.root.1
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas      1064 Nov 24 04:39 memory_monitor_summary.json
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas   1526164 Nov 24 04:39 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas   2173247 Nov 24 04:39 log.47556137._004712.job.log.tgz.1
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas      8664 Nov 24 04:39 heartbeat.json
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 04:40 boinc_mmap_file
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas        29 Nov 24 04:40 wrapper_checkpoint.txt
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas      4552 Nov 24 04:40 pilotlog.txt
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas   3636658 Nov 24 04:40 log.47556137._004712.job.log.1
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas       353 Nov 24 04:40 output.list
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas       620 Nov 24 04:40 runtime_log
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas   5826560 Nov 24 04:40 result.tar.gz
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 04:40 runtime_log.err
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas       670 Nov 24 04:40 eErKDmae8g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZFIKDmBKks4n.diag
[2025-11-24 04:40:40] -rw-r--r-- 1 boincer umatlas     21222 Nov 24 04:40 stderr.txt
[2025-11-24 04:40:40] HITS file was successfully produced:
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas 917388036 Nov 24 04:39 shared/HITS.pool.root.1
[2025-11-24 04:40:40]  *** Contents of shared directory: ***
[2025-11-24 04:40:40] total 1304876
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas 412358900 Nov 23 21:25 ATLAS.root_0
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 21:25 start_atlas.sh
[2025-11-24 04:40:40] -rw-r--r-- 2 boincer umatlas    590096 Nov 23 21:25 input.tar.gz
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas 917388036 Nov 24 04:39 HITS.pool.root.1
[2025-11-24 04:40:40] -rw------- 1 boincer umatlas   5826560 Nov 24 04:40 result.tar.gz
04:40:41 (25688): run_atlas exited; CPU time 291414.718876
04:40:41 (25688): called boinc_finish(0)

</stderr_txt>
]]>

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