Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:15:53 (469334): wrapper (7.7.26015): starting
21:15:53 (469334): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 21:15:53] Arguments: --nthreads 8
[2025-11-23 21:15:53] Threads: 8
[2025-11-23 21:15:53] Checking for CVMFS
[2025-11-23 21:15:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:15:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:15:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:15:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:15:54] 2.13.2.0 10481 30911 299856 153229 2 92 34603599 40960000 19514 16776704 0 56861305 99.776 33739319 33884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 21:15:54] CVMFS is ok
[2025-11-23 21:15:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:15:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:15:54] Further information can be found at the LHC@home message board.
[2025-11-23 21:15:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:15:54] Checking for apptainer binary...
[2025-11-23 21:15:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:15:54] Running /usr/bin/apptainer --version
[2025-11-23 21:15:54] apptainer version 1.4.4-1.el9
[2025-11-23 21:15:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:15:54] c-211-35-3.aglt2.org
[2025-11-23 21:15:54] apptainer works
[2025-11-23 21:15:54] Set ATHENA_PROC_NUMBER=8
[2025-11-23 21:15:54] Set ATHENA_CORE_NUMBER=8
[2025-11-23 21:15:54] Starting ATLAS job with PandaID=6895334472
[2025-11-23 21:15:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 11:22:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 11:22:03] 2025-11-25 16:20:47,150 | INFO     | chi2: 12.654536893438229
[2025-11-25 11:22:03] 2025-11-25 16:20:47,165 | INFO     | sum of square deviations: 3489547866189.996
[2025-11-25 11:22:03] 2025-11-25 16:20:47,605 | INFO     | sum of deviations: 10438300692118.488
[2025-11-25 11:22:03] 2025-11-25 16:20:47,606 | INFO     | mean x: 1764018955.0517626
[2025-11-25 11:22:03] 2025-11-25 16:20:47,606 | INFO     | mean y: 2971394.651048639
[2025-11-25 11:22:03] 2025-11-25 16:20:47,606 | INFO     | intersect: -5273746674.710545
[2025-11-25 11:22:03] 2025-11-25 16:20:47,629 | INFO     | chi2: 9.322750457163973
[2025-11-25 11:22:03] 2025-11-25 16:20:47,629 | INFO     | current chi2=9.322750457163973 (change=26.328789937796067 %)
[2025-11-25 11:22:03] 2025-11-25 16:20:47,632 | INFO     | sum of square deviations: 3466244308314.2285
[2025-11-25 11:22:03] 2025-11-25 16:20:47,661 | INFO     | time since job start (137067s) is within the limit (172800.0s)
[2025-11-25 11:22:03] 2025-11-25 16:20:47,661 | INFO     | 137070s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 11:22:03] 2025-11-25 16:20:47,661 | INFO     | monitor loop #7670: job 0:6895334472 is in state 'finished'
[2025-11-25 11:22:03] 2025-11-25 16:20:47,662 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:22:03] 2025-11-25 16:20:48,043 | INFO     | sum of deviations: 11239732004858.352
[2025-11-25 11:22:03] 2025-11-25 16:20:48,044 | INFO     | mean x: 1764018802.5626118
[2025-11-25 11:22:03] 2025-11-25 16:20:48,044 | INFO     | mean y: 2976639.0903398925
[2025-11-25 11:22:03] 2025-11-25 16:20:48,044 | INFO     | intersect: -5717075621.731863
[2025-11-25 11:22:03] 2025-11-25 16:20:48,057 | INFO     | chi2: 6.048069460404729
[2025-11-25 11:22:03] 2025-11-25 16:20:48,057 | INFO     | current chi2=6.048069460404729 (change=35.12569613233452 %)
[2025-11-25 11:22:03] 2025-11-25 16:20:48,070 | INFO     | sum of square deviations: 3443044206834.5225
[2025-11-25 11:22:03] 2025-11-25 16:20:48,906 | INFO     | sum of deviations: 11653825206738.998
[2025-11-25 11:22:03] 2025-11-25 16:20:48,907 | INFO     | mean x: 1764018650.0717168
[2025-11-25 11:22:03] 2025-11-25 16:20:48,907 | INFO     | mean y: 2979358.6436575525
[2025-11-25 11:22:03] 2025-11-25 16:20:48,907 | INFO     | intersect: -5967773200.546907
[2025-11-25 11:22:03] 2025-11-25 16:20:48,910 | INFO     | chi2: 4.690563370792509
[2025-11-25 11:22:03] 2025-11-25 16:20:48,910 | INFO     | current chi2=4.690563370792509 (change=22.44527941518347 %)
[2025-11-25 11:22:03] 2025-11-25 16:20:48,930 | INFO     | right removable region: 2230
[2025-11-25 11:22:03] 2025-11-25 16:20:48,933 | INFO     | sum of square deviations: 3489540960379.9995
[2025-11-25 11:22:03] 2025-11-25 16:20:49,613 | INFO     | sum of deviations: 8821536872126.95
[2025-11-25 11:22:03] 2025-11-25 16:20:49,613 | INFO     | mean x: 1764019260.0517626
[2025-11-25 11:22:03] 2025-11-25 16:20:49,613 | INFO     | mean y: 2971470.327978581
[2025-11-25 11:22:03] 2025-11-25 16:20:49,614 | INFO     | intersect: -4456457756.14373
[2025-11-25 11:22:03] 2025-11-25 16:20:49,639 | INFO     | chi2: 9.473567133334626
[2025-11-25 11:22:03] 2025-11-25 16:20:49,640 | INFO     | current chi2=9.473567133334626 (change=25.136990684764086 %)
[2025-11-25 11:22:03] 2025-11-25 16:20:49,650 | INFO     | sum of square deviations: 3466231588750.9683
[2025-11-25 11:22:03] 2025-11-25 16:20:49,738 | INFO     | time since job start (137069s) is within the limit (172800.0s)
[2025-11-25 11:22:03] 2025-11-25 16:20:50,272 | INFO     | monitor loop #7671: job 0:6895334472 is in state 'finished'
[2025-11-25 11:22:03] 2025-11-25 16:20:50,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 11:22:03] 2025-11-25 16:20:50,338 | INFO     | sum of deviations: 8462177175765.885
[2025-11-25 11:22:03] 2025-11-25 16:20:50,338 | INFO     | mean x: 1764019412.5599284
[2025-11-25 11:22:03] 2025-11-25 16:20:50,338 | INFO     | mean y: 2973820.3515205723
[2025-11-25 11:22:03] 2025-11-25 16:20:50,339 | INFO     | intersect: -4303560359.019792
[2025-11-25 11:22:03] 2025-11-25 16:20:50,364 | INFO     | chi2: 8.864526703879562
[2025-11-25 11:22:03] 2025-11-25 16:20:50,365 | INFO     | current chi2=8.864526703879562 (change=6.428839537242885 %)
[2025-11-25 11:22:03] 2025-11-25 16:20:50,365 | INFO     | left removable region: 20
[2025-11-25 11:22:03] 2025-11-25 16:20:50,374 | INFO     | sum of square deviations: 3346714095117.998
[2025-11-25 11:22:03] 2025-11-25 16:20:51,101 | INFO     | sum of deviations: 10115997697694.15
[2025-11-25 11:22:03] 2025-11-25 16:20:51,101 | INFO     | mean x: 1764019229.600905
[2025-11-25 11:22:03] 2025-11-25 16:20:51,102 | INFO     | mean y: 2989591.9321266967
[2025-11-25 11:22:03] 2025-11-25 16:20:51,102 | INFO     | intersect: -5329050719.297922
[2025-11-25 11:22:03] 2025-11-25 16:20:51,123 | INFO     | chi2: 0.710089988114925
[2025-11-25 11:22:03] 2025-11-25 16:20:51,124 | INFO     | current memory leak: 3.02 B/s (using 2210 data points, chi2=0.71)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,126 | INFO     | could have reported an average CPU frequency of 2577 MHz (78 samples)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | ..............................
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . Timing measurements:
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . get job = 0 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . initial setup = 3 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . payload setup = 14 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . stage-in = 0 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . payload execution = 137001 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . stage-out = 6 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | . log creation = 1 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,147 | INFO     | ..............................
[2025-11-25 11:22:03] 2025-11-25 16:20:51,769 | INFO     | time since job start (137071s) is within the limit (172800.0s)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,769 | INFO     | 
[2025-11-25 11:22:03] 2025-11-25 16:20:51,773 | INFO     | job summary report
[2025-11-25 11:22:03] 2025-11-25 16:20:51,773 | INFO     | --------------------------------------------------
[2025-11-25 11:22:03] 2025-11-25 16:20:51,773 | INFO     | PanDA job id: 6895334472
[2025-11-25 11:22:03] 2025-11-25 16:20:51,773 | INFO     | task id: 47556137
[2025-11-25 11:22:03] 2025-11-25 16:20:51,773 | INFO     | errors: (none)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | pilot state: finished 
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | transexitcode: 0
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | exeerrorcode: 0
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | exeerrordiag: 
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | exitcode: 0
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | exitmsg: OK
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | cpuconsumptiontime: 279782 s
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | nevents: 1000
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | neventsw: 0
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | pid: 487228
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | pgrp: 487228
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | corecount: 8
[2025-11-25 11:22:03] 2025-11-25 16:20:51,774 | INFO     | event service: False
[2025-11-25 11:22:03] 2025-11-25 16:20:51,775 | INFO     | sizes: {0: 2297979, 1: 2298835, 11: 2299097, 12: 2299125, 137021: 2386560, 137028: 2396350, 137030: 2396534, 137049: 2396780}
[2025-11-25 11:22:03] 2025-11-25 16:20:51,775 | INFO     | --------------------------------------------------
[2025-11-25 11:22:03] 2025-11-25 16:20:51,775 | INFO     | 
[2025-11-25 11:22:03] 2025-11-25 16:20:51,775 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 11:22:03] 2025-11-25 16:20:51,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,878 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 11:22:03] 2025-11-25 16:20:51,879 | INFO     | job 6895334472 has completed (purged errors)
[2025-11-25 11:22:03] 2025-11-25 16:20:51,879 | INFO     | overall cleanup function is called
[2025-11-25 11:22:03] 2025-11-25 16:20:52,906 | INFO     | --- collectZombieJob: --- 10, [487228]
[2025-11-25 11:22:03] 2025-11-25 16:20:52,906 | INFO     | zombie collector waiting for pid 487228
[2025-11-25 11:22:03] 2025-11-25 16:20:52,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 11:22:03] 2025-11-25 16:20:52,907 | INFO     | collected zombie processes
[2025-11-25 11:22:03] 2025-11-25 16:20:52,907 | INFO     | will attempt to kill all subprocesses of pid=487228
[2025-11-25 11:22:03] 2025-11-25 16:20:53,403 | INFO     | process IDs to be killed: [487228] (in reverse order)
[2025-11-25 11:22:03] 2025-11-25 16:20:53,556 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 11:22:03] 2025-11-25 16:20:53,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 11:22:03] 2025-11-25 16:20:53,571 | INFO     | did not find any defunct processes belonging to 487228
[2025-11-25 11:22:03] 2025-11-25 16:20:53,587 | INFO     | did not find any defunct processes belonging to 487228
[2025-11-25 11:22:03] 2025-11-25 16:20:53,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 11:22:03] 2025-11-25 16:20:53,590 | INFO     | ready for new job
[2025-11-25 11:22:03] 2025-11-25 16:20:53,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 11:22:03] 2025-11-25 16:20:53,609 | INFO     | ***************************************
[2025-11-25 11:22:03] 2025-11-25 16:20:53,609 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 11:22:03] 2025-11-25 16:20:53,609 | INFO     | ***************************************
[2025-11-25 11:22:03] 2025-11-25 16:20:53,609 | INFO     | 
[2025-11-25 11:22:03] 2025-11-25 16:20:53,619 | INFO     | architecture information:
[2025-11-25 11:22:03] 2025-11-25 16:20:53,627 | INFO     | executing command: cat /etc/os-release
[2025-11-25 11:22:03] 2025-11-25 16:20:53,684 | INFO     | cat /etc/os-release:
[2025-11-25 11:22:03] NAME="CentOS Linux"
[2025-11-25 11:22:03] VERSION="7 (Core)"
[2025-11-25 11:22:03] ID="centos"
[2025-11-25 11:22:03] ID_LIKE="rhel fedora"
[2025-11-25 11:22:03] VERSION_ID="7"
[2025-11-25 11:22:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 11:22:03] ANSI_COLOR="0;31"
[2025-11-25 11:22:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 11:22:03] HOME_URL="https://www.centos.org/"
[2025-11-25 11:22:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 11:22:03] 
[2025-11-25 11:22:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 11:22:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 11:22:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 11:22:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 11:22:03] 
[2025-11-25 11:22:03] 2025-11-25 16:20:53,684 | INFO     | ***************************************
[2025-11-25 11:22:03] 2025-11-25 16:20:54,187 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 11:22:03] 2025-11-25 16:20:54,264 | INFO     | sufficient remaining disk space (123608236032 B)
[2025-11-25 11:22:03] 2025-11-25 16:20:54,264 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 11:22:03] 2025-11-25 16:20:54,265 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 11:22:03] 2025-11-25 16:20:54,265 | INFO     | update_server=False
[2025-11-25 11:22:03] 2025-11-25 16:20:54,265 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 11:22:03] 2025-11-25 16:20:54,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:22:03] 2025-11-25 16:20:54,268 | INFO     | aborting loop
[2025-11-25 11:22:03] 2025-11-25 16:20:54,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 11:22:03] 2025-11-25 16:20:54,479 | INFO     | all job control threads have been joined
[2025-11-25 11:22:03] 2025-11-25 16:20:54,792 | INFO     | all data control threads have been joined
[2025-11-25 11:22:03] 2025-11-25 16:20:54,877 | INFO     | all payload control threads have been joined
[2025-11-25 11:22:03] 2025-11-25 16:20:55,271 | INFO     | [job] retrieve thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,274 | INFO     | [job] job monitor thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,283 | INFO     | [job] validate thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,284 | INFO     | [data] copytool_in thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,485 | INFO     | [job] control thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,602 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,603 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,624 | INFO     | [payload] validate_post thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,883 | INFO     | [data] control thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:55,884 | INFO     | [payload] control thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:56,161 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:56,266 | INFO     | [payload] failed_post thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:56,355 | INFO     | [data] copytool_out thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:56,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:20:56,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 11:22:03] 2025-11-25 16:20:57,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 11:22:03] 2025-11-25 16:20:57,804 | INFO     | [job] queue monitor thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:21:01,435 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 11:22:03] 2025-11-25 16:21:25,667 | INFO     | PID=480400 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 11:22:03] 2025-11-25 16:21:25,669 | INFO     | .. there are 17 such processes running
[2025-11-25 11:22:03] 2025-11-25 16:21:25,670 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 11:22:03] 2025-11-25 16:21:25,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 11:22:03] 2025-11-25 16:21:25,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 11:22:03] 2025-11-25 16:21:34,115 | INFO     | [monitor] cgroup control has ended
[2025-11-25 11:22:03] 2025-11-25 16:21:36,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460961429312)>', '<ExcThread(monitor, started 140460681037568)>']
[2025-11-25 11:22:03] 2025-11-25 16:21:36,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 11:22:03] 2025-11-25 16:21:36,737 | INFO     | [monitor] control thread has ended
[2025-11-25 11:22:03] 2025-11-25 16:21:41,042 | INFO     | all workflow threads have been joined
[2025-11-25 11:22:03] 2025-11-25 16:21:41,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 11:22:03] 2025-11-25 16:21:41,043 | INFO     | traces error code: 0
[2025-11-25 11:22:03] 2025-11-25 16:21:41,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 11:22:03] 2025-11-25 16:21:42,340 [wrapper] ==== pilot stdout END ====
[2025-11-25 11:22:03] 2025-11-25 16:21:42,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 11:22:03] 2025-11-25 16:21:42,358 [wrapper] pilotpid: 480400
[2025-11-25 11:22:03] 2025-11-25 16:21:42,360 [wrapper] Pilot exit status: 0
[2025-11-25 11:22:03] 2025-11-25 16:21:42,404 [wrapper] pandaids: 6895334472
[2025-11-25 11:22:03] 2025-11-25 16:21:42,610 [wrapper] cleanup supervisor_pilot  618107 480401
[2025-11-25 11:22:03] 2025-11-25 16:21:42,637 [wrapper] Test setup, not cleaning
[2025-11-25 11:22:03] 2025-11-25 16:21:42,656 [wrapper] apfmon messages muted
[2025-11-25 11:22:03] 2025-11-25 16:21:42,690 [wrapper] ==== wrapper stdout END ====
[2025-11-25 11:22:03] 2025-11-25 16:21:42,709 [wrapper] ==== wrapper stderr END ====
[2025-11-25 11:22:03]  *** Error codes and diagnostics ***
[2025-11-25 11:22:03]     "exeErrorCode": 0,
[2025-11-25 11:22:03]     "exeErrorDiag": "",
[2025-11-25 11:22:03]     "pilotErrorCode": 0,
[2025-11-25 11:22:03]     "pilotErrorDiag": "",
[2025-11-25 11:22:03]  *** Listing of results directory ***
[2025-11-25 11:22:03] total 1337516
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 22:44 pilot3.tar.gz
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 22:47 queuedata.json
[2025-11-25 11:22:03] -rwx------. 1 boincer umatlas     36292 Nov 21 22:48 runpilot2-wrapper.sh
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas       100 Nov 23 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 11:22:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 21:15 run_atlas
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas       105 Nov 23 21:15 job.xml
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas 410569996 Nov 23 21:15 EVNT.47483658._000237.pool.root.1
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:15 start_atlas.sh
[2025-11-25 11:22:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 21:15 shared
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 21:15 input.tar.gz
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas         0 Nov 23 21:15 boinc_lockfile
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 21:15 pandaJob.out
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas        57 Nov 23 21:15 setup.sh.local
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas    989786 Nov 23 21:16 agis_schedconf.cvmfs.json
[2025-11-25 11:22:03] drwx------. 5 boincer umatlas      4096 Nov 23 21:16 pilot3
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas       534 Nov 25 11:00 boinc_task_state.xml
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas      6881 Nov 25 11:18 init_data.xml
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas 916093953 Nov 25 11:19 HITS.47556137._002334.pool.root.1
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas      1062 Nov 25 11:20 memory_monitor_summary.json
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas   1516240 Nov 25 11:20 agis_ddmendpoints.agis.ALL.json
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas   2990555 Nov 25 11:20 log.47556137._002334.job.log.tgz.1
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas      8618 Nov 25 11:20 heartbeat.json
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas        95 Nov 25 11:21 pilot_heartbeat.json
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas      4824 Nov 25 11:21 pilotlog.txt
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas  16523428 Nov 25 11:21 log.47556137._002334.job.log.1
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas       353 Nov 25 11:21 output.list
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas       620 Nov 25 11:21 runtime_log
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas  19537920 Nov 25 11:21 result.tar.gz
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas      9354 Nov 25 11:21 runtime_log.err
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas       665 Nov 25 11:21 eToMDm5mtg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvvHKDmAkpcnm.diag
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas        30 Nov 25 11:22 wrapper_checkpoint.txt
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 11:22 boinc_mmap_file
[2025-11-25 11:22:03] -rw-r--r--. 1 boincer umatlas     21393 Nov 25 11:22 stderr.txt
[2025-11-25 11:22:03] HITS file was successfully produced:
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas 916093953 Nov 25 11:19 shared/HITS.pool.root.1
[2025-11-25 11:22:03]  *** Contents of shared directory: ***
[2025-11-25 11:22:03] total 1315256
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas 410569996 Nov 23 21:15 ATLAS.root_0
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:15 start_atlas.sh
[2025-11-25 11:22:03] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 21:15 input.tar.gz
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas 916093953 Nov 25 11:19 HITS.pool.root.1
[2025-11-25 11:22:03] -rw-------. 1 boincer umatlas  19537920 Nov 25 11:21 result.tar.gz
11:22:05 (469334): run_atlas exited; CPU time 283570.592508
11:22:05 (469334): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN