Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:33 (26829): wrapper (7.7.26015): starting
10:42:33 (26829): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 10:42:33] Arguments: --nthreads 8
[2025-11-26 10:42:33] Threads: 8
[2025-11-26 10:42:33] Checking for CVMFS
[2025-11-26 10:42:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 10:42:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 10:42:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 10:42:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 10:42:35] 2.11.2.0 29171 285184 141448 153316 3 85 13390305 25165824 4632 130560 10 145074589 99.879 81350453 3582 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 10:42:35] CVMFS is ok
[2025-11-26 10:42:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:42:35] Checking for apptainer binary...
[2025-11-26 10:42:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 10:42:35] Running /usr/bin/apptainer --version
[2025-11-26 10:42:35] apptainer version 1.3.2-1.el7
[2025-11-26 10:42:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:42:44] cg-vwn473.simple-grid.lan
[2025-11-26 10:42:44] apptainer works
[2025-11-26 10:42:44] Set ATHENA_PROC_NUMBER=8
[2025-11-26 10:42:44] Set ATHENA_CORE_NUMBER=8
[2025-11-26 10:42:44] Starting ATLAS job with PandaID=6893881097
[2025-11-26 10:42:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:27:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:27:36] 2025-11-27 07:26:39,330 | INFO     | time since job start (78029s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:40,769 | INFO     | monitor loop #5294: job 0:6893881097 is in state 'finished'
[2025-11-27 08:27:36] 2025-11-27 07:26:40,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:27:36] 2025-11-27 07:26:41,337 | INFO     | time since job start (78031s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:43,273 | INFO     | monitor loop #5295: job 0:6893881097 is in state 'finished'
[2025-11-27 08:27:36] 2025-11-27 07:26:43,273 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:27:36] 2025-11-27 07:26:43,344 | INFO     | time since job start (78033s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:45,351 | INFO     | time since job start (78035s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:45,780 | INFO     | monitor loop #5296: job 0:6893881097 is in state 'finished'
[2025-11-27 08:27:36] 2025-11-27 07:26:45,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:27:36] 2025-11-27 07:26:47,357 | INFO     | time since job start (78037s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:48,285 | INFO     | monitor loop #5297: job 0:6893881097 is in state 'finished'
[2025-11-27 08:27:36] 2025-11-27 07:26:48,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,003 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 08:27:36] 2025-11-27 07:26:49,004 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-27 08:27:36] 2025-11-27 07:26:49,006 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6893881097/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,006 | INFO     | extracted standard info from prmon json
[2025-11-27 08:27:36] 2025-11-27 07:26:49,006 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:27:36] 2025-11-27 07:26:49,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:27:36] 2025-11-27 07:26:49,027 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:27:36] 2025-11-27 07:26:49,029 | INFO     | sum of square deviations: 635166897816.46
[2025-11-27 08:27:36] 2025-11-27 07:26:49,080 | INFO     | sum of deviations: 3343049781488.7407
[2025-11-27 08:27:36] 2025-11-27 07:26:49,080 | INFO     | mean x: 1764189592.562992
[2025-11-27 08:27:36] 2025-11-27 07:26:49,080 | INFO     | mean y: 2821470.922047244
[2025-11-27 08:27:36] 2025-11-27 07:26:49,080 | INFO     | intersect: -9282570529.507204
[2025-11-27 08:27:36] 2025-11-27 07:26:49,082 | INFO     | chi2: 25.5310723554922
[2025-11-27 08:27:36] 2025-11-27 07:26:49,083 | INFO     | sum of square deviations: 627694806663.289
[2025-11-27 08:27:36] 2025-11-27 07:26:49,123 | INFO     | sum of deviations: 3770828663904.2017
[2025-11-27 08:27:36] 2025-11-27 07:26:49,123 | INFO     | mean x: 1764189440.0671937
[2025-11-27 08:27:36] 2025-11-27 07:26:49,123 | INFO     | mean y: 2830200.3976284587
[2025-11-27 08:27:36] 2025-11-27 07:26:49,123 | INFO     | intersect: -10595403269.982222
[2025-11-27 08:27:36] 2025-11-27 07:26:49,125 | INFO     | chi2: 22.213511453648355
[2025-11-27 08:27:36] 2025-11-27 07:26:49,125 | INFO     | current chi2=22.213511453648355 (change=12.994209000117365 %)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,125 | INFO     | right removable region: 1264
[2025-11-27 08:27:36] 2025-11-27 07:26:49,126 | INFO     | sum of square deviations: 627693983163.2886
[2025-11-27 08:27:36] 2025-11-27 07:26:49,174 | INFO     | sum of deviations: 2797908314136.0933
[2025-11-27 08:27:36] 2025-11-27 07:26:49,174 | INFO     | mean x: 1764189745.0671937
[2025-11-27 08:27:36] 2025-11-27 07:26:49,174 | INFO     | mean y: 2832595.963636364
[2025-11-27 08:27:36] 2025-11-27 07:26:49,174 | INFO     | intersect: -7860937470.0831375
[2025-11-27 08:27:36] 2025-11-27 07:26:49,176 | INFO     | chi2: 20.396493659464994
[2025-11-27 08:27:36] 2025-11-27 07:26:49,176 | INFO     | current chi2=20.396493659464994 (change=20.111096880435824 %)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,176 | INFO     | left removable region: 10
[2025-11-27 08:27:36] 2025-11-27 07:26:49,177 | INFO     | sum of square deviations: 611461342538.1512
[2025-11-27 08:27:36] 2025-11-27 07:26:49,231 | INFO     | sum of deviations: 2826567186979.659
[2025-11-27 08:27:36] 2025-11-27 07:26:49,231 | INFO     | mean x: 1764189714.576555
[2025-11-27 08:27:36] 2025-11-27 07:26:49,231 | INFO     | mean y: 2853523.3421052634
[2025-11-27 08:27:36] 2025-11-27 07:26:49,232 | INFO     | intersect: -8152364823.135734
[2025-11-27 08:27:36] 2025-11-27 07:26:49,233 | INFO     | chi2: 12.197830570515874
[2025-11-27 08:27:36] 2025-11-27 07:26:49,233 | INFO     | current memory leak: 4.62 B/s (using 1254 data points, chi2=12.20)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,234 | INFO     | could have reported an average CPU frequency of 2249 MHz (43 samples)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,234 | INFO     | ..............................
[2025-11-27 08:27:36] 2025-11-27 07:26:49,234 | INFO     | . Timing measurements:
[2025-11-27 08:27:36] 2025-11-27 07:26:49,234 | INFO     | . get job = 0 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . initial setup = 13 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . payload setup = 154 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . stage-in = 0 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . payload execution = 77574 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . stage-out = 4 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | . log creation = 2 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,235 | INFO     | ..............................
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | 
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | job summary report
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | --------------------------------------------------
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | PanDA job id: 6893881097
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | task id: 47523449
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | errors: (none)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | pilot state: finished 
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | transexitcode: 0
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | exeerrorcode: 0
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | exeerrordiag: 
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | exitcode: 0
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | exitmsg: OK
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | cpuconsumptiontime: 287582 s
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | nevents: 1000
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | neventsw: 0
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | pid: 4866
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | pgrp: 4866
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | corecount: 8
[2025-11-27 08:27:36] 2025-11-27 07:26:49,374 | INFO     | event service: False
[2025-11-27 08:27:36] 2025-11-27 07:26:49,375 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284320, 12: 2284320, 23: 2284348, 34: 2284376, 45: 2284532, 55: 2284560, 66: 2284588, 77: 2284616, 88: 2284672, 98: 2284980, 10
[2025-11-27 08:27:36] 2025-11-27 07:26:49,375 | INFO     | --------------------------------------------------
[2025-11-27 08:27:36] 2025-11-27 07:26:49,375 | INFO     | 
[2025-11-27 08:27:36] 2025-11-27 07:26:49,375 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-27 08:27:36] 2025-11-27 07:26:49,381 | INFO     | time since job start (78039s) is within the limit (172800.0s)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:27:36] 2025-11-27 07:26:49,869 | INFO     | job 6893881097 has completed (purged errors)
[2025-11-27 08:27:36] 2025-11-27 07:26:49,870 | INFO     | overall cleanup function is called
[2025-11-27 08:27:36] 2025-11-27 07:26:50,895 | INFO     | --- collectZombieJob: --- 10, [4866]
[2025-11-27 08:27:36] 2025-11-27 07:26:50,895 | INFO     | zombie collector waiting for pid 4866
[2025-11-27 08:27:36] 2025-11-27 07:26:50,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:27:36] 2025-11-27 07:26:50,896 | INFO     | collected zombie processes
[2025-11-27 08:27:36] 2025-11-27 07:26:50,896 | INFO     | will attempt to kill all subprocesses of pid=4866
[2025-11-27 08:27:36] 2025-11-27 07:26:50,995 | INFO     | process IDs to be killed: [4866] (in reverse order)
[2025-11-27 08:27:36] 2025-11-27 07:26:51,925 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:27:36] 2025-11-27 07:26:51,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:27:36] 2025-11-27 07:26:51,928 | INFO     | did not find any defunct processes belonging to 4866
[2025-11-27 08:27:36] 2025-11-27 07:26:51,930 | INFO     | did not find any defunct processes belonging to 4866
[2025-11-27 08:27:36] 2025-11-27 07:26:51,973 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:27:36] 2025-11-27 07:26:51,974 | INFO     | ready for new job
[2025-11-27 08:27:36] 2025-11-27 07:26:51,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:27:36] 2025-11-27 07:26:51,978 | INFO     | ***************************************
[2025-11-27 08:27:36] 2025-11-27 07:26:51,979 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:27:36] 2025-11-27 07:26:51,979 | INFO     | ***************************************
[2025-11-27 08:27:36] 2025-11-27 07:26:51,979 | INFO     | 
[2025-11-27 08:27:36] 2025-11-27 07:26:51,979 | INFO     | pilot is running in a VM
[2025-11-27 08:27:36] 2025-11-27 07:26:51,979 | INFO     | architecture information:
[2025-11-27 08:27:36] 2025-11-27 07:26:51,989 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:27:36] 2025-11-27 07:26:52,315 | INFO     | cat /etc/os-release:
[2025-11-27 08:27:36] NAME="CentOS Linux"
[2025-11-27 08:27:36] VERSION="7 (Core)"
[2025-11-27 08:27:36] ID="centos"
[2025-11-27 08:27:36] ID_LIKE="rhel fedora"
[2025-11-27 08:27:36] VERSION_ID="7"
[2025-11-27 08:27:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:27:36] ANSI_COLOR="0;31"
[2025-11-27 08:27:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:27:36] HOME_URL="https://www.centos.org/"
[2025-11-27 08:27:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:27:36] 
[2025-11-27 08:27:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:27:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:27:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:27:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:27:36] 
[2025-11-27 08:27:36] 2025-11-27 07:26:52,315 | INFO     | ***************************************
[2025-11-27 08:27:36] 2025-11-27 07:26:52,818 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-27 08:27:36] 2025-11-27 07:26:53,081 | INFO     | sufficient remaining disk space (495651389440 B)
[2025-11-27 08:27:36] 2025-11-27 07:26:53,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:27:36] 2025-11-27 07:26:53,081 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:27:36] 2025-11-27 07:26:53,081 | INFO     | update_server=False
[2025-11-27 08:27:36] 2025-11-27 07:26:53,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:27:36] 2025-11-27 07:26:53,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:27:36] 2025-11-27 07:26:53,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:27:36] 2025-11-27 07:26:53,260 | INFO     | all data control threads have been joined
[2025-11-27 08:27:36] 2025-11-27 07:26:53,306 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:27:36] 2025-11-27 07:26:53,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:27:36] 2025-11-27 07:26:53,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:27:36] 2025-11-27 07:26:53,307 | INFO     | will abort loop
[2025-11-27 08:27:36] 2025-11-27 07:26:53,535 | INFO     | all job control threads have been joined
[2025-11-27 08:27:36] 2025-11-27 07:26:54,087 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,256 | INFO     | all payload control threads have been joined
[2025-11-27 08:27:36] 2025-11-27 07:26:54,266 | INFO     | [data] control thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,311 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:27:36] 2025-11-27 07:26:54,459 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,497 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,541 | INFO     | [job] control thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:54,998 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,019 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,111 | INFO     | [job] validate thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,219 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,262 | INFO     | [payload] control thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,301 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,312 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,316 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:55,393 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:26:57,092 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:27:36] 2025-11-27 07:27:22,521 | INFO     | PID=30661 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 08:27:36] 2025-11-27 07:27:22,521 | INFO     | .. there are 9 such processes running
[2025-11-27 08:27:36] 2025-11-27 07:27:22,521 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:27:36] 2025-11-27 07:27:22,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:27:36] 2025-11-27 07:27:22,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:27:36] 2025-11-27 07:27:25,992 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:27:36] 2025-11-27 07:27:26,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804633773888)>', '<ExcThread(monitor, started 139804045985536)>']
[2025-11-27 08:27:36] 2025-11-27 07:27:27,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:27:36] 2025-11-27 07:27:27,550 | INFO     | [monitor] control thread has ended
[2025-11-27 08:27:36] 2025-11-27 07:27:31,667 | INFO     | all workflow threads have been joined
[2025-11-27 08:27:36] 2025-11-27 07:27:31,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:27:36] 2025-11-27 07:27:31,668 | INFO     | traces error code: 0
[2025-11-27 08:27:36] 2025-11-27 07:27:31,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:27:36] 2025-11-27 07:27:31,811 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:27:36] 2025-11-27 07:27:31,818 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:27:36] 2025-11-27 07:27:31,820 [wrapper] pilotpid: 30661
[2025-11-27 08:27:36] 2025-11-27 07:27:31,897 [wrapper] Pilot exit status: 0
[2025-11-27 08:27:36] 2025-11-27 07:27:32,164 [wrapper] pandaids: 6893881097
[2025-11-27 08:27:36] 2025-11-27 07:27:32,872 [wrapper] cleanup supervisor_pilot 22867 30662
[2025-11-27 08:27:36] 2025-11-27 07:27:32,950 [wrapper] Test setup, not cleaning
[2025-11-27 08:27:36] 2025-11-27 07:27:33,051 [wrapper] apfmon messages muted
[2025-11-27 08:27:36] 2025-11-27 07:27:33,141 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:27:36] 2025-11-27 07:27:33,265 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:27:36]  *** Error codes and diagnostics ***
[2025-11-27 08:27:36]     "exeErrorCode": 0,
[2025-11-27 08:27:36]     "exeErrorDiag": "",
[2025-11-27 08:27:36]     "pilotErrorCode": 0,
[2025-11-27 08:27:36]     "pilotErrorDiag": "",
[2025-11-27 08:27:36]  *** Listing of results directory ***
[2025-11-27 08:27:36] total 1341404
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc    576529 Nov 20 20:10 pilot3.tar.gz
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc      5112 Nov 20 20:48 queuedata.json
[2025-11-27 08:27:36] -rwx------. 1 boinc boinc     36292 Nov 20 20:50 runpilot2-wrapper.sh
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc       100 Nov 26 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:27:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 10:42 run_atlas
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc       105 Nov 26 10:42 job.xml
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc 410523013 Nov 26 10:42 EVNT.47493127._000850.pool.root.1
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc    590103 Nov 26 10:42 input.tar.gz
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc      6393 Nov 26 10:42 init_data.xml
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:42 start_atlas.sh
[2025-11-27 08:27:36] drwxrwx--x. 2 boinc boinc        68 Nov 26 10:42 shared
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 10:42 boinc_lockfile
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc      2784 Nov 26 10:42 pandaJob.out
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc    991827 Nov 26 10:46 agis_schedconf.cvmfs.json
[2025-11-27 08:27:36] drwx------. 5 boinc boinc      4096 Nov 26 10:46 pilot3
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc       533 Nov 27 08:03 boinc_task_state.xml
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc 933422356 Nov 27 08:23 HITS.47523449._008494.pool.root.1
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc      1032 Nov 27 08:24 memory_monitor_summary.json
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc   1516240 Nov 27 08:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc   2391144 Nov 27 08:25 log.47523449._008494.job.log.tgz.1
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc        95 Nov 27 08:26 pilot_heartbeat.json
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc      8632 Nov 27 08:26 heartbeat.json
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc        29 Nov 27 08:27 wrapper_checkpoint.txt
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc      8192 Nov 27 08:27 boinc_mmap_file
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc      5071 Nov 27 08:27 pilotlog.txt
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc  10482911 Nov 27 08:27 log.47523449._008494.job.log.1
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc       353 Nov 27 08:27 output.list
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc       620 Nov 27 08:27 runtime_log
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc  12892160 Nov 27 08:27 result.tar.gz
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc      8833 Nov 27 08:27 runtime_log.err
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc       662 Nov 27 08:27 LAULDmIrPg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDml2GKDmYGbwqn.diag
[2025-11-27 08:27:36] -rw-r--r--. 1 boinc boinc     21411 Nov 27 08:27 stderr.txt
[2025-11-27 08:27:36] HITS file was successfully produced:
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc 933422356 Nov 27 08:23 shared/HITS.pool.root.1
[2025-11-27 08:27:36]  *** Contents of shared directory: ***
[2025-11-27 08:27:36] total 1325640
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc 410523013 Nov 26 10:42 ATLAS.root_0
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc    590103 Nov 26 10:42 input.tar.gz
[2025-11-27 08:27:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 10:42 start_atlas.sh
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc 933422356 Nov 27 08:23 HITS.pool.root.1
[2025-11-27 08:27:36] -rw-------. 1 boinc boinc  12892160 Nov 27 08:27 result.tar.gz
08:27:38 (26829): run_atlas exited; CPU time 288029.921561
08:27:38 (26829): called boinc_finish(0)

</stderr_txt>
]]>

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