Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:06 (805158): wrapper (7.7.26015): starting
00:04:06 (805158): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:04:06] Arguments: --nthreads 9
[2025-11-24 00:04:06] Threads: 9
[2025-11-24 00:04:06] Checking for CVMFS
[2025-11-24 00:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:04:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:04:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:04:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:04:09] 2.13.3.0 11393 26727 332496 153233 3 110 32186023 32935937 19576 16776704 0 83746259 99.389 128197542 40397 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 00:04:09] CVMFS is ok
[2025-11-24 00:04:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:04:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:04:09] Further information can be found at the LHC@home message board.
[2025-11-24 00:04:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:04:09] Checking for apptainer binary...
[2025-11-24 00:04:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:04:09] Running /usr/bin/apptainer --version
[2025-11-24 00:04:10] apptainer version 1.4.4-1.el9
[2025-11-24 00:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:04:10] c6-5-37-2.aglt2.org
[2025-11-24 00:04:10] apptainer works
[2025-11-24 00:04:10] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:04:10] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:04:11] Starting ATLAS job with PandaID=6895349988
[2025-11-24 00:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:21:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:21:55] 2025-11-24 21:56:16,257 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:21:55] 2025-11-24 21:56:16,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:21:55] 2025-11-24 21:56:16,355 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:21:55] 2025-11-24 21:56:16,356 | INFO     | sum of square deviations: 302688979769.1201
[2025-11-24 17:21:55] 2025-11-24 21:56:16,388 | INFO     | sum of deviations: 2369567057394.0366
[2025-11-24 17:21:55] 2025-11-24 21:56:16,388 | INFO     | mean x: 1763991100.9002016
[2025-11-24 17:21:55] 2025-11-24 21:56:16,389 | INFO     | mean y: 3064723.7983870967
[2025-11-24 17:21:55] 2025-11-24 21:56:16,389 | INFO     | intersect: -13806143676.90925
[2025-11-24 17:21:55] 2025-11-24 21:56:16,390 | INFO     | chi2: 7.732932581355644
[2025-11-24 17:21:55] 2025-11-24 21:56:16,395 | INFO     | sum of square deviations: 298136821318.2695
[2025-11-24 17:21:55] 2025-11-24 21:56:16,416 | INFO     | sum of deviations: 2737803703387.9478
[2025-11-24 17:21:55] 2025-11-24 21:56:16,417 | INFO     | mean x: 1763990948.432624
[2025-11-24 17:21:55] 2025-11-24 21:56:16,417 | INFO     | mean y: 3077057.15704154
[2025-11-24 17:21:55] 2025-11-24 21:56:16,417 | INFO     | intersect: -16195730356.188494
[2025-11-24 17:21:55] 2025-11-24 21:56:16,418 | INFO     | chi2: 4.307298628056319
[2025-11-24 17:21:55] 2025-11-24 21:56:16,418 | INFO     | current chi2=4.307298628056319 (change=44.29928642541953 %)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,419 | INFO     | sum of square deviations: 293630330650.5298
[2025-11-24 17:21:55] 2025-11-24 21:56:16,435 | INFO     | sum of deviations: 2956396529498.1914
[2025-11-24 17:21:55] 2025-11-24 21:56:16,435 | INFO     | mean x: 1763990795.9613035
[2025-11-24 17:21:55] 2025-11-24 21:56:16,435 | INFO     | mean y: 3084445.6629327904
[2025-11-24 17:21:55] 2025-11-24 21:56:16,436 | INFO     | intersect: -17757534001.66483
[2025-11-24 17:21:55] 2025-11-24 21:56:16,437 | INFO     | chi2: 2.796333351123706
[2025-11-24 17:21:55] 2025-11-24 21:56:16,437 | INFO     | current chi2=2.796333351123706 (change=35.07918552687954 %)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,438 | INFO     | sum of square deviations: 289168257825.2981
[2025-11-24 17:21:55] 2025-11-24 21:56:16,453 | INFO     | sum of deviations: 3029647585969.19
[2025-11-24 17:21:55] 2025-11-24 21:56:16,454 | INFO     | mean x: 1763990643.468782
[2025-11-24 17:21:55] 2025-11-24 21:56:16,454 | INFO     | mean y: 3086942.7441146364
[2025-11-24 17:21:55] 2025-11-24 21:56:16,454 | INFO     | intersect: -18478436703.209415
[2025-11-24 17:21:55] 2025-11-24 21:56:16,455 | INFO     | chi2: 2.433004497688571
[2025-11-24 17:21:55] 2025-11-24 21:56:16,455 | INFO     | current chi2=2.433004497688571 (change=12.993045099187873 %)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,455 | INFO     | right removable region: 976
[2025-11-24 17:21:55] 2025-11-24 21:56:16,456 | INFO     | sum of square deviations: 298133129261.8567
[2025-11-24 17:21:55] 2025-11-24 21:56:16,472 | INFO     | sum of deviations: 2070685469867.937
[2025-11-24 17:21:55] 2025-11-24 21:56:16,473 | INFO     | mean x: 1763991253.4295845
[2025-11-24 17:21:55] 2025-11-24 21:56:16,473 | INFO     | mean y: 3074719.207700101
[2025-11-24 17:21:55] 2025-11-24 21:56:16,473 | INFO     | intersect: -12248737303.476135
[2025-11-24 17:21:55] 2025-11-24 21:56:16,474 | INFO     | chi2: 5.489185155679467
[2025-11-24 17:21:55] 2025-11-24 21:56:16,474 | INFO     | current chi2=5.489185155679467 (change=29.015478954076578 %)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,475 | INFO     | sum of square deviations: 293624811282.4287
[2025-11-24 17:21:55] 2025-11-24 21:56:16,491 | INFO     | sum of deviations: 1997158731245.7795
[2025-11-24 17:21:55] 2025-11-24 21:56:16,491 | INFO     | mean x: 1763991405.931772
[2025-11-24 17:21:55] 2025-11-24 21:56:16,492 | INFO     | mean y: 3077206.116089613
[2025-11-24 17:21:55] 2025-11-24 21:56:16,492 | INFO     | intersect: -11995128336.570557
[2025-11-24 17:21:55] 2025-11-24 21:56:16,493 | INFO     | chi2: 5.450365053536233
[2025-11-24 17:21:55] 2025-11-24 21:56:16,493 | INFO     | current chi2=5.450365053536233 (change=0.7072106522598884 %)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,493 | INFO     | left removable region: 20
[2025-11-24 17:21:55] 2025-11-24 21:56:16,494 | INFO     | sum of square deviations: 270916829198.6212
[2025-11-24 17:21:55] 2025-11-24 21:56:16,509 | INFO     | sum of deviations: 2521028542324.538
[2025-11-24 17:21:55] 2025-11-24 21:56:16,510 | INFO     | mean x: 1763991223.0198746
[2025-11-24 17:21:55] 2025-11-24 21:56:16,510 | INFO     | mean y: 3104193.4979079496
[2025-11-24 17:21:55] 2025-11-24 21:56:16,510 | INFO     | intersect: -16411794189.8828
[2025-11-24 17:21:55] 2025-11-24 21:56:16,511 | INFO     | chi2: 0.08571278353291473
[2025-11-24 17:21:55] 2025-11-24 21:56:16,511 | INFO     | current memory leak: 9.31 B/s (using 956 data points, chi2=0.09)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,512 | INFO     | could have reported an average CPU frequency of 2888 MHz (36 samples)
[2025-11-24 17:21:55] 2025-11-24 21:56:16,512 | INFO     | ..............................
[2025-11-24 17:21:55] 2025-11-24 21:56:16,512 | INFO     | . Timing measurements:
[2025-11-24 17:21:55] 2025-11-24 21:56:16,512 | INFO     | . get job = 0 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . initial setup = 3 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . payload setup = 38 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . stage-in = 0 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . payload execution = 60491 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . stage-out = 5 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | . log creation = 0 s
[2025-11-24 17:21:55] 2025-11-24 21:56:16,513 | INFO     | ..............................
[2025-11-24 17:21:55] 2025-11-24 21:56:17,060 | INFO     | 
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | job summary report
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | --------------------------------------------------
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | PanDA job id: 6895349988
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | task id: 47556137
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | errors: (none)
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | pilot state: finished 
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | transexitcode: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | exeerrorcode: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | exeerrordiag: 
[2025-11-24 17:21:55] 2025-11-24 21:56:17,061 | INFO     | exitcode: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | exitmsg: OK
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | cpuconsumptiontime: 230217 s
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | nevents: 1000
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | neventsw: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | pid: 821080
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | pgrp: 821080
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | corecount: 9
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | event service: False
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | sizes: {0: 2297927, 1: 2298612, 2: 2298811, 3: 2298811, 14: 2298839, 25: 2298867, 36: 2299023, 40: 2299313, 47: 2299341, 60534: 2352458, 60540: 2362243, 60542: 236
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | --------------------------------------------------
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | 
[2025-11-24 17:21:55] 2025-11-24 21:56:17,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-24 17:21:55] 2025-11-24 21:56:17,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | job 6895349988 has completed (purged errors)
[2025-11-24 17:21:55] 2025-11-24 21:56:17,084 | INFO     | overall cleanup function is called
[2025-11-24 17:21:55] 2025-11-24 21:56:18,103 | INFO     | --- collectZombieJob: --- 10, [821080]
[2025-11-24 17:21:55] 2025-11-24 21:56:18,103 | INFO     | zombie collector waiting for pid 821080
[2025-11-24 17:21:55] 2025-11-24 21:56:18,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:21:55] 2025-11-24 21:56:18,103 | INFO     | collected zombie processes
[2025-11-24 17:21:55] 2025-11-24 21:56:18,103 | INFO     | will attempt to kill all subprocesses of pid=821080
[2025-11-24 17:21:55] 2025-11-24 21:56:18,789 | INFO     | process IDs to be killed: [821080] (in reverse order)
[2025-11-24 17:21:55] 2025-11-24 21:56:18,930 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:21:55] 2025-11-24 21:56:18,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:21:55] 2025-11-24 21:56:18,955 | INFO     | did not find any defunct processes belonging to 821080
[2025-11-24 17:21:55] 2025-11-24 21:56:18,967 | INFO     | did not find any defunct processes belonging to 821080
[2025-11-24 17:21:55] 2025-11-24 21:56:18,968 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:21:55] 2025-11-24 21:56:18,968 | INFO     | ready for new job
[2025-11-24 17:21:55] 2025-11-24 21:56:18,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:21:55] 2025-11-24 21:56:18,972 | INFO     | ***************************************
[2025-11-24 17:21:55] 2025-11-24 21:56:18,973 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:21:55] 2025-11-24 21:56:18,973 | INFO     | ***************************************
[2025-11-24 17:21:55] 2025-11-24 21:56:18,973 | INFO     | 
[2025-11-24 17:21:55] 2025-11-24 21:56:18,977 | INFO     | architecture information:
[2025-11-24 17:21:55] 2025-11-24 21:56:18,978 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:21:55] 2025-11-24 21:56:18,998 | INFO     | cat /etc/os-release:
[2025-11-24 17:21:55] NAME="CentOS Linux"
[2025-11-24 17:21:55] VERSION="7 (Core)"
[2025-11-24 17:21:55] ID="centos"
[2025-11-24 17:21:55] ID_LIKE="rhel fedora"
[2025-11-24 17:21:55] VERSION_ID="7"
[2025-11-24 17:21:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:21:55] ANSI_COLOR="0;31"
[2025-11-24 17:21:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:21:55] HOME_URL="https://www.centos.org/"
[2025-11-24 17:21:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:21:55] 
[2025-11-24 17:21:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:21:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:21:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:21:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:21:55] 
[2025-11-24 17:21:55] 2025-11-24 21:56:18,998 | INFO     | ***************************************
[2025-11-24 17:21:55] 2025-11-24 21:56:19,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-24 17:21:55] 2025-11-24 21:56:19,547 | INFO     | sufficient remaining disk space (70478987264 B)
[2025-11-24 17:21:55] 2025-11-24 21:56:19,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:21:55] 2025-11-24 21:56:19,547 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:21:55] 2025-11-24 21:56:19,547 | INFO     | update_server=False
[2025-11-24 17:21:55] 2025-11-24 21:56:19,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:21:55] 2025-11-24 21:56:19,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:21:55] 2025-11-24 21:56:19,548 | INFO     | aborting loop
[2025-11-24 17:21:55] 2025-11-24 21:56:19,763 | INFO     | all payload control threads have been joined
[2025-11-24 17:21:55] 2025-11-24 21:56:20,280 | INFO     | all job control threads have been joined
[2025-11-24 17:21:55] 2025-11-24 21:56:20,554 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,554 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,559 | INFO     | [job] validate thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,584 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,654 | INFO     | all data control threads have been joined
[2025-11-24 17:21:55] 2025-11-24 21:56:20,750 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,770 | INFO     | [payload] control thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:20,785 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:21:55] 2025-11-24 21:56:20,797 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:21:55] 2025-11-24 21:56:21,287 | INFO     | [job] control thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:21:55] 2025-11-24 21:56:21,553 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,553 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,584 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:21:55] 2025-11-24 21:56:21,661 | INFO     | [data] control thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,867 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:21,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:22,667 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:22,805 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:25,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:21:55] 2025-11-24 21:56:26,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861356246848)>', '<ExcThread(monitor, started 139860618757888)>']
[2025-11-24 17:21:55] 2025-11-24 21:56:31,732 | INFO     | all workflow threads have been joined
[2025-11-24 17:21:55] 2025-11-24 21:56:31,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:21:55] 2025-11-24 21:56:31,733 | INFO     | traces error code: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:31,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | INFO     | PID=812874 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | INFO     | .. there are 25 such processes running
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:21:55] 2025-11-24 21:56:49,770 | INFO     | [monitor] control thread has ended
[2025-11-24 17:21:55] 2025-11-24 21:56:49,992 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:21:55] 2025-11-24 21:56:49,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:21:55] 2025-11-24 21:56:50,008 [wrapper] pilotpid: 812874
[2025-11-24 17:21:55] 2025-11-24 21:56:50,027 [wrapper] Pilot exit status: 0
[2025-11-24 17:21:55] 2025-11-24 21:56:50,131 [wrapper] pandaids: 6895349988
[2025-11-24 17:21:55] 2025-11-24 21:56:50,195 [wrapper] cleanup supervisor_pilot 3239360 812875
[2025-11-24 17:21:55] 2025-11-24 21:56:50,198 [wrapper] Test setup, not cleaning
[2025-11-24 17:21:55] 2025-11-24 21:56:50,201 [wrapper] apfmon messages muted
[2025-11-24 17:21:55] 2025-11-24 21:56:50,203 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:21:55] 2025-11-24 21:56:50,206 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:21:55]  *** Error codes and diagnostics ***
[2025-11-24 17:21:55]     "exeErrorCode": 0,
[2025-11-24 17:21:55]     "exeErrorDiag": "",
[2025-11-24 17:21:55]     "pilotErrorCode": 0,
[2025-11-24 17:21:55]     "pilotErrorDiag": "",
[2025-11-24 17:21:55]  *** Listing of results directory ***
[2025-11-24 17:21:55] total 1315900
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 15:05 queuedata.json
[2025-11-24 17:21:55] -rwx------. 1 boincer umatlas     36292 Nov 22 15:06 runpilot2-wrapper.sh
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:21:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:04 run_atlas
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:04 job.xml
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas 410472193 Nov 24 00:04 EVNT.47483658._000487.pool.root.1
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-24 17:21:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:04 shared
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 00:04 input.tar.gz
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:04 boinc_lockfile
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas      2784 Nov 24 00:04 pandaJob.out
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas        57 Nov 24 00:04 setup.sh.local
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas    989786 Nov 24 00:05 agis_schedconf.cvmfs.json
[2025-11-24 17:21:55] drwx------. 5 boincer umatlas      4096 Nov 24 00:05 pilot3
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas       531 Nov 24 16:41 boinc_task_state.xml
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas 912959776 Nov 24 16:55 HITS.47556137._004827.pool.root.1
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas      1057 Nov 24 16:55 memory_monitor_summary.json
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas   1516227 Nov 24 16:55 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas   2241895 Nov 24 16:55 log.47556137._004827.job.log.tgz.1
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas        95 Nov 24 16:56 pilot_heartbeat.json
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas      8630 Nov 24 16:56 heartbeat.json
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas       822 Nov 24 16:56 pilotlog.txt
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas   7828346 Nov 24 16:56 log.47556137._004827.job.log.1
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas       353 Nov 24 16:56 output.list
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas       620 Nov 24 16:56 runtime_log
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas  10086400 Nov 24 16:56 result.tar.gz
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas      9348 Nov 24 16:56 runtime_log.err
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas       662 Nov 24 16:56 FWOODms38g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6GIKDmNC2Yym.diag
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas      6841 Nov 24 17:20 init_data.xml
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 17:21 boinc_mmap_file
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas        28 Nov 24 17:21 wrapper_checkpoint.txt
[2025-11-24 17:21:55] -rw-r--r--. 1 boincer umatlas     21157 Nov 24 17:21 stderr.txt
[2025-11-24 17:21:55] HITS file was successfully produced:
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas 912959776 Nov 24 16:55 shared/HITS.pool.root.1
[2025-11-24 17:21:55]  *** Contents of shared directory: ***
[2025-11-24 17:21:55] total 1302868
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas 410472193 Nov 24 00:04 ATLAS.root_0
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:04 start_atlas.sh
[2025-11-24 17:21:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 00:04 input.tar.gz
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas 912959776 Nov 24 16:55 HITS.pool.root.1
[2025-11-24 17:21:55] -rw-------. 1 boincer umatlas  10086400 Nov 24 16:56 result.tar.gz
17:21:57 (805158): run_atlas exited; CPU time 231367.649092
17:21:57 (805158): called boinc_finish(0)

</stderr_txt>
]]>

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