Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:14:05 (311701): wrapper (7.7.26015): starting
21:14:05 (311701): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 21:14:05] Arguments: --nthreads 9
[2025-11-23 21:14:05] Threads: 9
[2025-11-23 21:14:05] Checking for CVMFS
[2025-11-23 21:14:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:14:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:14:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:14:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:14:06] 2.13.3.0 9371 26421 297716 153228 0 626 31391416 32935937 25147 16776704 0 145256736 99.776 83398308 34445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-23 21:14:06] CVMFS is ok
[2025-11-23 21:14:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:14:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:14:06] Further information can be found at the LHC@home message board.
[2025-11-23 21:14:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:14:06] Checking for apptainer binary...
[2025-11-23 21:14:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:14:06] Running /usr/bin/apptainer --version
[2025-11-23 21:14:06] apptainer version 1.4.4-1.el9
[2025-11-23 21:14:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:14:07] c-8-1.aglt2.org
[2025-11-23 21:14:07] apptainer works
[2025-11-23 21:14:07] Set ATHENA_PROC_NUMBER=9
[2025-11-23 21:14:07] Set ATHENA_CORE_NUMBER=9
[2025-11-23 21:14:07] Starting ATLAS job with PandaID=6895355142
[2025-11-23 21:14:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 18:01:46]  *** The last 200 lines of the pilot log: ***
[2025-11-24 18:01:46] 2025-11-24 23:00:48,086 | INFO     | monitor loop #4519: job 0:6895355142 is in state 'finished'
[2025-11-24 18:01:46] 2025-11-24 23:00:48,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,124 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 18:01:46] 2025-11-24 23:00:48,138 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8053499999996
[2025-11-24 18:01:46] 2025-11-24 23:00:48,160 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895355142/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,161 | INFO     | extracted standard info from prmon json
[2025-11-24 18:01:46] 2025-11-24 23:00:48,161 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 18:01:46] 2025-11-24 23:00:48,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 18:01:46] 2025-11-24 23:00:48,314 | INFO     | fitting pss+swap vs Time
[2025-11-24 18:01:46] 2025-11-24 23:00:48,316 | INFO     | sum of square deviations: 569989551218.1221
[2025-11-24 18:01:46] 2025-11-24 23:00:48,446 | INFO     | time since job start (74784s) is within the limit (172800.0s)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,448 | INFO     | sum of deviations: 2922491866346.685
[2025-11-24 18:01:46] 2025-11-24 23:00:48,448 | INFO     | mean x: 1763987836.7102041
[2025-11-24 18:01:46] 2025-11-24 23:00:48,448 | INFO     | mean y: 3123246.6808163268
[2025-11-24 18:01:46] 2025-11-24 23:00:48,448 | INFO     | intersect: -9041323435.02206
[2025-11-24 18:01:46] 2025-11-24 23:00:48,450 | INFO     | chi2: 10.02764886847141
[2025-11-24 18:01:46] 2025-11-24 23:00:48,459 | INFO     | sum of square deviations: 563038859843.4384
[2025-11-24 18:01:46] 2025-11-24 23:00:48,593 | INFO     | sum of deviations: 3362668237356.7183
[2025-11-24 18:01:46] 2025-11-24 23:00:48,605 | INFO     | mean x: 1763987684.2172132
[2025-11-24 18:01:46] 2025-11-24 23:00:48,606 | INFO     | mean y: 3132902.118032787
[2025-11-24 18:01:46] 2025-11-24 23:00:48,606 | INFO     | intersect: -10532028664.625439
[2025-11-24 18:01:46] 2025-11-24 23:00:48,607 | INFO     | chi2: 6.89412584831435
[2025-11-24 18:01:46] 2025-11-24 23:00:48,608 | INFO     | current chi2=6.89412584831435 (change=31.248830720522886 %)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,623 | INFO     | sum of square deviations: 556144913718.634
[2025-11-24 18:01:46] 2025-11-24 23:00:48,774 | INFO     | sum of deviations: 3769922160343.03
[2025-11-24 18:01:46] 2025-11-24 23:00:48,775 | INFO     | mean x: 1763987531.7242799
[2025-11-24 18:01:46] 2025-11-24 23:00:48,775 | INFO     | mean y: 3141906.4329218105
[2025-11-24 18:01:46] 2025-11-24 23:00:48,775 | INFO     | intersect: -11954345292.27334
[2025-11-24 18:01:46] 2025-11-24 23:00:48,789 | INFO     | chi2: 4.134085170227217
[2025-11-24 18:01:46] 2025-11-24 23:00:48,789 | INFO     | current chi2=4.134085170227217 (change=40.03467210802335 %)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,790 | INFO     | sum of square deviations: 549307480281.20667
[2025-11-24 18:01:46] 2025-11-24 23:00:48,939 | INFO     | sum of deviations: 3970317872763.8643
[2025-11-24 18:01:46] 2025-11-24 23:00:48,939 | INFO     | mean x: 1763987379.231405
[2025-11-24 18:01:46] 2025-11-24 23:00:48,939 | INFO     | mean y: 3146374.9826446283
[2025-11-24 18:01:46] 2025-11-24 23:00:48,939 | INFO     | intersect: -12746708434.034323
[2025-11-24 18:01:46] 2025-11-24 23:00:48,941 | INFO     | chi2: 3.342973267417915
[2025-11-24 18:01:46] 2025-11-24 23:00:48,941 | INFO     | current chi2=3.342973267417915 (change=19.136323279131208 %)
[2025-11-24 18:01:46] 2025-11-24 23:00:48,942 | INFO     | right removable region: 1209
[2025-11-24 18:01:46] 2025-11-24 23:00:48,943 | INFO     | sum of square deviations: 563037656376.8727
[2025-11-24 18:01:46] 2025-11-24 23:00:49,058 | INFO     | sum of deviations: 2546975416497.5967
[2025-11-24 18:01:46] 2025-11-24 23:00:49,058 | INFO     | mean x: 1763987989.2163935
[2025-11-24 18:01:46] 2025-11-24 23:00:49,058 | INFO     | mean y: 3131476.35
[2025-11-24 18:01:46] 2025-11-24 23:00:49,058 | INFO     | intersect: -7976501844.167865
[2025-11-24 18:01:46] 2025-11-24 23:00:49,060 | INFO     | chi2: 7.705070734775579
[2025-11-24 18:01:46] 2025-11-24 23:00:49,060 | INFO     | current chi2=7.705070734775579 (change=23.161741741859363 %)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,060 | INFO     | left removable region: 10
[2025-11-24 18:01:46] 2025-11-24 23:00:49,066 | INFO     | sum of square deviations: 534460789841.3664
[2025-11-24 18:01:46] 2025-11-24 23:00:49,121 | INFO     | sum of deviations: 3536335818834.6
[2025-11-24 18:01:46] 2025-11-24 23:00:49,122 | INFO     | mean x: 1763987653.7422853
[2025-11-24 18:01:46] 2025-11-24 23:00:49,122 | INFO     | mean y: 3157759.794829024
[2025-11-24 18:01:46] 2025-11-24 23:00:49,122 | INFO     | intersect: -11668517398.568743
[2025-11-24 18:01:46] 2025-11-24 23:00:49,124 | INFO     | chi2: 0.8089177244000919
[2025-11-24 18:01:46] 2025-11-24 23:00:49,124 | INFO     | current memory leak: 6.62 B/s (using 1199 data points, chi2=0.81)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,125 | INFO     | could have reported an average CPU frequency of 2599 MHz (44 samples)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | ..............................
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . Timing measurements:
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . get job = 0 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . initial setup = 3 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . payload setup = 12 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . stage-in = 0 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . payload execution = 74716 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . stage-out = 7 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,126 | INFO     | . log creation = 1 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,127 | INFO     | ..............................
[2025-11-24 18:01:46] 2025-11-24 23:00:49,285 | INFO     | 
[2025-11-24 18:01:46] 2025-11-24 23:00:49,285 | INFO     | job summary report
[2025-11-24 18:01:46] 2025-11-24 23:00:49,285 | INFO     | --------------------------------------------------
[2025-11-24 18:01:46] 2025-11-24 23:00:49,285 | INFO     | PanDA job id: 6895355142
[2025-11-24 18:01:46] 2025-11-24 23:00:49,285 | INFO     | task id: 47556137
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | errors: (none)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | pilot state: finished 
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | transexitcode: 0
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | exeerrorcode: 0
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | exeerrordiag: 
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | exitcode: 0
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | exitmsg: OK
[2025-11-24 18:01:46] 2025-11-24 23:00:49,286 | INFO     | cpuconsumptiontime: 301447 s
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | nevents: 1000
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | neventsw: 0
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | pid: 322380
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | pgrp: 322380
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | corecount: 9
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | event service: False
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | sizes: {0: 2298636, 1: 2298835, 8: 2299097, 11: 2299125, 74733: 2358563, 74741: 2368532, 74767: 2368722}
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | --------------------------------------------------
[2025-11-24 18:01:46] 2025-11-24 23:00:49,287 | INFO     | 
[2025-11-24 18:01:46] 2025-11-24 23:00:49,288 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 18:01:46] 2025-11-24 23:00:49,372 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,373 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,373 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,373 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,373 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,373 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,374 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 18:01:46] 2025-11-24 23:00:49,375 | INFO     | job 6895355142 has completed (purged errors)
[2025-11-24 18:01:46] 2025-11-24 23:00:49,376 | INFO     | overall cleanup function is called
[2025-11-24 18:01:46] 2025-11-24 23:00:50,407 | INFO     | --- collectZombieJob: --- 10, [322380]
[2025-11-24 18:01:46] 2025-11-24 23:00:50,408 | INFO     | zombie collector waiting for pid 322380
[2025-11-24 18:01:46] 2025-11-24 23:00:50,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 18:01:46] 2025-11-24 23:00:50,409 | INFO     | collected zombie processes
[2025-11-24 18:01:46] 2025-11-24 23:00:50,409 | INFO     | will attempt to kill all subprocesses of pid=322380
[2025-11-24 18:01:46] 2025-11-24 23:00:51,493 | INFO     | process IDs to be killed: [322380] (in reverse order)
[2025-11-24 18:01:46] 2025-11-24 23:00:51,751 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 18:01:46] 2025-11-24 23:00:51,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 18:01:46] 2025-11-24 23:00:51,783 | INFO     | did not find any defunct processes belonging to 322380
[2025-11-24 18:01:46] 2025-11-24 23:00:51,810 | INFO     | did not find any defunct processes belonging to 322380
[2025-11-24 18:01:46] 2025-11-24 23:00:51,819 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 18:01:46] 2025-11-24 23:00:51,819 | INFO     | ready for new job
[2025-11-24 18:01:46] 2025-11-24 23:00:51,819 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 18:01:46] 2025-11-24 23:00:51,825 | INFO     | ***************************************
[2025-11-24 18:01:46] 2025-11-24 23:00:51,825 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 18:01:46] 2025-11-24 23:00:51,825 | INFO     | ***************************************
[2025-11-24 18:01:46] 2025-11-24 23:00:51,826 | INFO     | 
[2025-11-24 18:01:46] 2025-11-24 23:00:51,827 | INFO     | architecture information:
[2025-11-24 18:01:46] 2025-11-24 23:00:51,852 | INFO     | executing command: cat /etc/os-release
[2025-11-24 18:01:46] 2025-11-24 23:00:51,983 | INFO     | cat /etc/os-release:
[2025-11-24 18:01:46] NAME="CentOS Linux"
[2025-11-24 18:01:46] VERSION="7 (Core)"
[2025-11-24 18:01:46] ID="centos"
[2025-11-24 18:01:46] ID_LIKE="rhel fedora"
[2025-11-24 18:01:46] VERSION_ID="7"
[2025-11-24 18:01:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 18:01:46] ANSI_COLOR="0;31"
[2025-11-24 18:01:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 18:01:46] HOME_URL="https://www.centos.org/"
[2025-11-24 18:01:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 18:01:46] 
[2025-11-24 18:01:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 18:01:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 18:01:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 18:01:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 18:01:46] 
[2025-11-24 18:01:46] 2025-11-24 23:00:51,984 | INFO     | ***************************************
[2025-11-24 18:01:46] 2025-11-24 23:00:52,487 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 18:01:46] 2025-11-24 23:00:52,551 | INFO     | sufficient remaining disk space (71590477824 B)
[2025-11-24 18:01:46] 2025-11-24 23:00:52,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 18:01:46] 2025-11-24 23:00:52,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 18:01:46] 2025-11-24 23:00:52,553 | INFO     | update_server=False
[2025-11-24 18:01:46] 2025-11-24 23:00:52,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 18:01:46] 2025-11-24 23:00:52,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:01:46] 2025-11-24 23:00:52,555 | INFO     | aborting loop
[2025-11-24 18:01:46] 2025-11-24 23:00:52,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 18:01:46] 2025-11-24 23:00:52,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 18:01:46] 2025-11-24 23:00:52,735 | INFO     | all job control threads have been joined
[2025-11-24 18:01:46] 2025-11-24 23:00:53,042 | INFO     | all data control threads have been joined
[2025-11-24 18:01:46] 2025-11-24 23:00:53,254 | INFO     | all payload control threads have been joined
[2025-11-24 18:01:46] 2025-11-24 23:00:53,563 | INFO     | [job] retrieve thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,564 | INFO     | [job] job monitor thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,741 | INFO     | [job] control thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,786 | INFO     | [payload] failed_post thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,896 | INFO     | [data] copytool_in thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,898 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,983 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,991 | INFO     | [job] validate thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:53,995 | INFO     | [payload] validate_post thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:54,062 | INFO     | [data] control thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:54,251 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:54,260 | INFO     | [payload] control thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:54,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 18:01:46] 2025-11-24 23:00:54,566 | INFO     | [data] copytool_out thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:54,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:55,308 | INFO     | [job] queue monitor thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:00:56,567 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 18:01:46] 2025-11-24 23:01:22,902 | INFO     | PID=315398 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 18:01:46] 2025-11-24 23:01:22,902 | INFO     | .. there are 43 such processes running
[2025-11-24 18:01:46] 2025-11-24 23:01:22,902 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 18:01:46] 2025-11-24 23:01:22,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 18:01:46] 2025-11-24 23:01:22,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 18:01:46] 2025-11-24 23:01:39,482 | INFO     | [monitor] cgroup control has ended
[2025-11-24 18:01:46] 2025-11-24 23:01:40,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436596823872)>', '<ExcThread(monitor, started 140436316325632)>']
[2025-11-24 18:01:46] 2025-11-24 23:01:41,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 18:01:46] 2025-11-24 23:01:41,062 | INFO     | [monitor] control thread has ended
[2025-11-24 18:01:46] 2025-11-24 23:01:45,122 | INFO     | all workflow threads have been joined
[2025-11-24 18:01:46] 2025-11-24 23:01:45,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 18:01:46] 2025-11-24 23:01:45,123 | INFO     | traces error code: 0
[2025-11-24 18:01:46] 2025-11-24 23:01:45,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 18:01:46] 2025-11-24 23:01:45,793 [wrapper] ==== pilot stdout END ====
[2025-11-24 18:01:46] 2025-11-24 23:01:45,815 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 18:01:46] 2025-11-24 23:01:45,832 [wrapper] pilotpid: 315398
[2025-11-24 18:01:46] 2025-11-24 23:01:45,848 [wrapper] Pilot exit status: 0
[2025-11-24 18:01:46] 2025-11-24 23:01:45,868 [wrapper] pandaids: 6895355142
[2025-11-24 18:01:46] 2025-11-24 23:01:45,953 [wrapper] cleanup supervisor_pilot  247572 315399
[2025-11-24 18:01:46] 2025-11-24 23:01:45,970 [wrapper] Test setup, not cleaning
[2025-11-24 18:01:46] 2025-11-24 23:01:45,993 [wrapper] apfmon messages muted
[2025-11-24 18:01:46] 2025-11-24 23:01:46,012 [wrapper] ==== wrapper stdout END ====
[2025-11-24 18:01:46] 2025-11-24 23:01:46,027 [wrapper] ==== wrapper stderr END ====
[2025-11-24 18:01:46]  *** Error codes and diagnostics ***
[2025-11-24 18:01:46]     "exeErrorCode": 0,
[2025-11-24 18:01:46]     "exeErrorDiag": "",
[2025-11-24 18:01:46]     "pilotErrorCode": 0,
[2025-11-24 18:01:46]     "pilotErrorDiag": "",
[2025-11-24 18:01:46]  *** Listing of results directory ***
[2025-11-24 18:01:46] total 1320432
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 01:03 pilot3.tar.gz
[2025-11-24 18:01:46] -rwx------. 1 boincer umatlas     36292 Nov 23 01:04 runpilot2-wrapper.sh
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 01:04 queuedata.json
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas       100 Nov 23 21:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 18:01:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 21:14 run_atlas
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas       105 Nov 23 21:14 job.xml
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas 411014702 Nov 23 21:14 EVNT.47483658._000646.pool.root.1
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:14 start_atlas.sh
[2025-11-24 18:01:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 21:14 shared
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 21:14 input.tar.gz
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas         0 Nov 23 21:14 boinc_lockfile
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas      2786 Nov 23 21:14 pandaJob.out
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas        57 Nov 23 21:14 setup.sh.local
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas    989786 Nov 23 21:14 agis_schedconf.cvmfs.json
[2025-11-24 18:01:46] drwx------. 5 boincer umatlas      4096 Nov 23 21:14 pilot3
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas       533 Nov 24 17:31 boinc_task_state.xml
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas 913478084 Nov 24 17:58 HITS.47556137._006414.pool.root.1
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas      6659 Nov 24 17:58 init_data.xml
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas      1071 Nov 24 18:00 memory_monitor_summary.json
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas   1516227 Nov 24 18:00 agis_ddmendpoints.agis.ALL.json
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas   2419288 Nov 24 18:00 log.47556137._006414.job.log.tgz.1
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas        95 Nov 24 18:00 pilot_heartbeat.json
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas      8662 Nov 24 18:00 heartbeat.json
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 18:01 boinc_mmap_file
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas      4823 Nov 24 18:01 pilotlog.txt
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas        29 Nov 24 18:01 wrapper_checkpoint.txt
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas   9436247 Nov 24 18:01 log.47556137._006414.job.log.1
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas       353 Nov 24 18:01 output.list
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas       620 Nov 24 18:01 runtime_log
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas  11878400 Nov 24 18:01 result.tar.gz
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas       662 Nov 24 18:01 SsDODmlNIh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmShKKDmXC5ZCo.diag
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas      9328 Nov 24 18:01 runtime_log.err
[2025-11-24 18:01:46] -rw-r--r--. 1 boincer umatlas     21296 Nov 24 18:01 stderr.txt
[2025-11-24 18:01:46] HITS file was successfully produced:
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas 913478084 Nov 24 17:58 shared/HITS.pool.root.1
[2025-11-24 18:01:46]  *** Contents of shared directory: ***
[2025-11-24 18:01:46] total 1305656
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas 411014702 Nov 23 21:14 ATLAS.root_0
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:14 start_atlas.sh
[2025-11-24 18:01:46] -rw-r--r--. 2 boincer umatlas    590098 Nov 23 21:14 input.tar.gz
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas 913478084 Nov 24 17:58 HITS.pool.root.1
[2025-11-24 18:01:46] -rw-------. 1 boincer umatlas  11878400 Nov 24 18:01 result.tar.gz
18:01:48 (311701): run_atlas exited; CPU time 304050.484551
18:01:48 (311701): called boinc_finish(0)

</stderr_txt>
]]>

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