Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:15:01 (460264): wrapper (7.7.26015): starting
21:15:01 (460264): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 21:15:01] Arguments: --nthreads 8
[2025-11-23 21:15:01] Threads: 8
[2025-11-23 21:15:01] Checking for CVMFS
[2025-11-23 21:15:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:15:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:15:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:15:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:15:02] 2.13.2.0 10481 30910 306748 153229 2 89 34603599 40960000 19220 16776704 0 56835306 99.776 33739319 33884 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 21:15:02] CVMFS is ok
[2025-11-23 21:15:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:15:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:15:02] Further information can be found at the LHC@home message board.
[2025-11-23 21:15:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:15:02] Checking for apptainer binary...
[2025-11-23 21:15:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:15:02] Running /usr/bin/apptainer --version
[2025-11-23 21:15:02] apptainer version 1.4.4-1.el9
[2025-11-23 21:15:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:15:02] c-211-35-3.aglt2.org
[2025-11-23 21:15:02] apptainer works
[2025-11-23 21:15:02] Set ATHENA_PROC_NUMBER=8
[2025-11-23 21:15:02] Set ATHENA_CORE_NUMBER=8
[2025-11-23 21:15:02] Starting ATLAS job with PandaID=6895345512
[2025-11-23 21:15:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:28:43]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:28:43] 2025-11-25 15:27:26,311 | INFO     | time since job start (133920s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:28,320 | INFO     | time since job start (133922s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:28,362 | INFO     | monitor loop #7463: job 0:6895345512 is in state 'finished'
[2025-11-25 10:28:43] 2025-11-25 15:27:28,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:28:43] 2025-11-25 15:27:30,328 | INFO     | time since job start (133924s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:30,868 | INFO     | monitor loop #7464: job 0:6895345512 is in state 'finished'
[2025-11-25 10:28:43] 2025-11-25 15:27:30,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:28:43] 2025-11-25 15:27:32,335 | INFO     | time since job start (133926s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:33,375 | INFO     | monitor loop #7465: job 0:6895345512 is in state 'finished'
[2025-11-25 10:28:43] 2025-11-25 15:27:33,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:28:43] 2025-11-25 15:27:33,926 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 10:28:43] 2025-11-25 15:27:33,991 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2574.288864583333
[2025-11-25 10:28:43] 2025-11-25 15:27:34,098 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6895345512/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:28:43] 2025-11-25 15:27:34,099 | INFO     | extracted standard info from prmon json
[2025-11-25 10:28:43] 2025-11-25 15:27:34,099 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:28:43] 2025-11-25 15:27:34,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:28:43] 2025-11-25 15:27:34,302 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:28:43] 2025-11-25 15:27:34,318 | INFO     | sum of square deviations: 3274559531888.8057
[2025-11-25 10:28:43] 2025-11-25 15:27:34,351 | INFO     | time since job start (133928s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:35,581 | INFO     | sum of deviations: 8606224839161.682
[2025-11-25 10:28:43] 2025-11-25 15:27:35,582 | INFO     | mean x: 1764017467.3960803
[2025-11-25 10:28:43] 2025-11-25 15:27:35,651 | INFO     | mean y: 2994315.2661804925
[2025-11-25 10:28:43] 2025-11-25 15:27:35,651 | INFO     | intersect: -4633211194.750105
[2025-11-25 10:28:43] 2025-11-25 15:27:35,655 | INFO     | chi2: 16.02838717299634
[2025-11-25 10:28:43] 2025-11-25 15:27:35,749 | INFO     | sum of square deviations: 3252224370636.175
[2025-11-25 10:28:43] 2025-11-25 15:27:35,995 | INFO     | monitor loop #7466: job 0:6895345512 is in state 'finished'
[2025-11-25 10:28:43] 2025-11-25 15:27:35,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:28:43] 2025-11-25 15:27:36,403 | INFO     | time since job start (133930s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:36,964 | INFO     | sum of deviations: 9353931612318.197
[2025-11-25 10:28:43] 2025-11-25 15:27:37,004 | INFO     | mean x: 1764017314.9072635
[2025-11-25 10:28:43] 2025-11-25 15:27:37,004 | INFO     | mean y: 2999419.4787574233
[2025-11-25 10:28:43] 2025-11-25 15:27:37,005 | INFO     | intersect: -5070604196.424292
[2025-11-25 10:28:43] 2025-11-25 15:27:37,007 | INFO     | chi2: 12.952752175042532
[2025-11-25 10:28:43] 2025-11-25 15:27:37,008 | INFO     | current chi2=12.952752175042532 (change=19.18867422378873 %)
[2025-11-25 10:28:43] 2025-11-25 15:27:37,008 | INFO     | right removable region: 2188
[2025-11-25 10:28:43] 2025-11-25 15:27:37,049 | INFO     | sum of square deviations: 3252217818016.1777
[2025-11-25 10:28:43] 2025-11-25 15:27:38,091 | INFO     | sum of deviations: 7838172693954.909
[2025-11-25 10:28:43] 2025-11-25 15:27:38,092 | INFO     | mean x: 1764017619.9072635
[2025-11-25 10:28:43] 2025-11-25 15:27:38,092 | INFO     | mean y: 2999557.0292370943
[2025-11-25 10:28:43] 2025-11-25 15:27:38,092 | INFO     | intersect: -4248460681.4017124
[2025-11-25 10:28:43] 2025-11-25 15:27:38,112 | INFO     | chi2: 13.139487984021043
[2025-11-25 10:28:43] 2025-11-25 15:27:38,112 | INFO     | current chi2=13.139487984021043 (change=18.023642415141676 %)
[2025-11-25 10:28:43] 2025-11-25 15:27:38,112 | INFO     | left removable region: 10
[2025-11-25 10:28:43] 2025-11-25 15:27:38,137 | INFO     | sum of square deviations: 3203433438420.894
[2025-11-25 10:28:43] 2025-11-25 15:27:38,542 | INFO     | monitor loop #7467: job 0:6895345512 is in state 'finished'
[2025-11-25 10:28:43] 2025-11-25 15:27:38,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 10:28:43] 2025-11-25 15:27:38,710 | INFO     | time since job start (133932s) is within the limit (172800.0s)
[2025-11-25 10:28:43] 2025-11-25 15:27:38,866 | INFO     | sum of deviations: 8440369953165.881
[2025-11-25 10:28:43] 2025-11-25 15:27:38,866 | INFO     | mean x: 1764017589.4269972
[2025-11-25 10:28:43] 2025-11-25 15:27:38,866 | INFO     | mean y: 3007608.5495867766
[2025-11-25 10:28:43] 2025-11-25 15:27:38,866 | INFO     | intersect: -4644805853.120191
[2025-11-25 10:28:43] 2025-11-25 15:27:38,889 | INFO     | chi2: 9.164180478278443
[2025-11-25 10:28:43] 2025-11-25 15:27:38,889 | INFO     | current memory leak: 2.63 B/s (using 2178 data points, chi2=9.16)
[2025-11-25 10:28:43] 2025-11-25 15:27:38,891 | INFO     | could have reported an average CPU frequency of 2576 MHz (76 samples)
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | ..............................
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . Timing measurements:
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . get job = 0 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . initial setup = 3 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . payload setup = 14 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . stage-in = 0 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . payload execution = 133843 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . stage-out = 9 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | . log creation = 4 s
[2025-11-25 10:28:43] 2025-11-25 15:27:38,892 | INFO     | ..............................
[2025-11-25 10:28:43] 2025-11-25 15:27:39,608 | INFO     | 
[2025-11-25 10:28:43] 2025-11-25 15:27:39,608 | INFO     | job summary report
[2025-11-25 10:28:43] 2025-11-25 15:27:39,608 | INFO     | --------------------------------------------------
[2025-11-25 10:28:43] 2025-11-25 15:27:39,608 | INFO     | PanDA job id: 6895345512
[2025-11-25 10:28:43] 2025-11-25 15:27:39,608 | INFO     | task id: 47556137
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | errors: (none)
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | pilot state: finished 
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | transexitcode: 0
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | exeerrorcode: 0
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | exeerrordiag: 
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | exitcode: 0
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | exitmsg: OK
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | cpuconsumptiontime: 267877 s
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | nevents: 1000
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | neventsw: 0
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | pid: 472479
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | pgrp: 472479
[2025-11-25 10:28:43] 2025-11-25 15:27:39,609 | INFO     | corecount: 8
[2025-11-25 10:28:43] 2025-11-25 15:27:39,610 | INFO     | event service: False
[2025-11-25 10:28:43] 2025-11-25 15:27:39,610 | INFO     | sizes: {0: 2298584, 1: 2298783, 11: 2299045, 12: 2299073, 133862: 2385072, 133872: 2394862, 133874: 2395046, 133911: 2395292}
[2025-11-25 10:28:43] 2025-11-25 15:27:39,610 | INFO     | --------------------------------------------------
[2025-11-25 10:28:43] 2025-11-25 15:27:39,610 | INFO     | 
[2025-11-25 10:28:43] 2025-11-25 15:27:39,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-25 10:28:43] 2025-11-25 15:27:39,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | job 6895345512 has completed (purged errors)
[2025-11-25 10:28:43] 2025-11-25 15:27:39,812 | INFO     | overall cleanup function is called
[2025-11-25 10:28:43] 2025-11-25 15:27:40,914 | INFO     | --- collectZombieJob: --- 10, [472479]
[2025-11-25 10:28:43] 2025-11-25 15:27:40,914 | INFO     | zombie collector waiting for pid 472479
[2025-11-25 10:28:43] 2025-11-25 15:27:40,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:28:43] 2025-11-25 15:27:40,914 | INFO     | collected zombie processes
[2025-11-25 10:28:43] 2025-11-25 15:27:40,914 | INFO     | will attempt to kill all subprocesses of pid=472479
[2025-11-25 10:28:43] 2025-11-25 15:27:41,611 | INFO     | process IDs to be killed: [472479] (in reverse order)
[2025-11-25 10:28:43] 2025-11-25 15:27:41,750 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:28:43] 2025-11-25 15:27:41,750 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:28:43] 2025-11-25 15:27:41,773 | INFO     | did not find any defunct processes belonging to 472479
[2025-11-25 10:28:43] 2025-11-25 15:27:41,786 | INFO     | did not find any defunct processes belonging to 472479
[2025-11-25 10:28:43] 2025-11-25 15:27:41,788 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:28:43] 2025-11-25 15:27:41,788 | INFO     | ready for new job
[2025-11-25 10:28:43] 2025-11-25 15:27:41,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:28:43] 2025-11-25 15:27:41,797 | INFO     | ***************************************
[2025-11-25 10:28:43] 2025-11-25 15:27:41,797 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:28:43] 2025-11-25 15:27:41,797 | INFO     | ***************************************
[2025-11-25 10:28:43] 2025-11-25 15:27:41,797 | INFO     | 
[2025-11-25 10:28:43] 2025-11-25 15:27:41,807 | INFO     | architecture information:
[2025-11-25 10:28:43] 2025-11-25 15:27:41,809 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:28:43] 2025-11-25 15:27:41,834 | INFO     | cat /etc/os-release:
[2025-11-25 10:28:43] NAME="CentOS Linux"
[2025-11-25 10:28:43] VERSION="7 (Core)"
[2025-11-25 10:28:43] ID="centos"
[2025-11-25 10:28:43] ID_LIKE="rhel fedora"
[2025-11-25 10:28:43] VERSION_ID="7"
[2025-11-25 10:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:28:43] ANSI_COLOR="0;31"
[2025-11-25 10:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:28:43] HOME_URL="https://www.centos.org/"
[2025-11-25 10:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:28:43] 
[2025-11-25 10:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:28:43] 
[2025-11-25 10:28:43] 2025-11-25 15:27:41,835 | INFO     | ***************************************
[2025-11-25 10:28:43] 2025-11-25 15:27:42,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | INFO     | sufficient remaining disk space (121860259840 B)
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | INFO     | update_server=False
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:28:43] 2025-11-25 15:27:42,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:28:43] 2025-11-25 15:27:42,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:28:43] 2025-11-25 15:27:42,411 | INFO     | aborting loop
[2025-11-25 10:28:43] 2025-11-25 15:27:42,413 | INFO     | all payload control threads have been joined
[2025-11-25 10:28:43] 2025-11-25 15:27:42,808 | INFO     | all data control threads have been joined
[2025-11-25 10:28:43] 2025-11-25 15:27:43,415 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:43,416 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:43,419 | INFO     | [payload] control thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:43,719 | INFO     | all job control threads have been joined
[2025-11-25 10:28:43] 2025-11-25 15:27:43,814 | INFO     | [data] control thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,096 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:28:43] 2025-11-25 15:27:44,407 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,419 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,703 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,709 | INFO     | [job] validate thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,725 | INFO     | [job] control thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,788 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:28:43] 2025-11-25 15:27:44,909 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:44,955 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:45,330 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:27:48,797 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:28:43] 2025-11-25 15:28:14,186 | INFO     | PID=464199 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-25 10:28:43] 2025-11-25 15:28:14,187 | INFO     | .. there are 17 such processes running
[2025-11-25 10:28:43] 2025-11-25 15:28:14,187 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:28:43] 2025-11-25 15:28:14,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:28:43] 2025-11-25 15:28:14,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:28:43] 2025-11-25 15:28:34,387 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:28:43] 2025-11-25 15:28:36,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720766879552)>', '<ExcThread(monitor, started 139720411555584)>']
[2025-11-25 10:28:43] 2025-11-25 15:28:36,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:28:43] 2025-11-25 15:28:36,345 | INFO     | [monitor] control thread has ended
[2025-11-25 10:28:43] 2025-11-25 15:28:41,096 | INFO     | all workflow threads have been joined
[2025-11-25 10:28:43] 2025-11-25 15:28:41,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:28:43] 2025-11-25 15:28:41,126 | INFO     | traces error code: 0
[2025-11-25 10:28:43] 2025-11-25 15:28:41,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:28:43] 2025-11-25 15:28:42,859 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:28:43] 2025-11-25 15:28:42,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:28:43] 2025-11-25 15:28:42,884 [wrapper] pilotpid: 464199
[2025-11-25 10:28:43] 2025-11-25 15:28:42,901 [wrapper] Pilot exit status: 0
[2025-11-25 10:28:43] 2025-11-25 15:28:43,018 [wrapper] pandaids: 6895345512
[2025-11-25 10:28:43] 2025-11-25 15:28:43,365 [wrapper] cleanup supervisor_pilot  499728 464200
[2025-11-25 10:28:43] 2025-11-25 15:28:43,376 [wrapper] Test setup, not cleaning
[2025-11-25 10:28:43] 2025-11-25 15:28:43,396 [wrapper] apfmon messages muted
[2025-11-25 10:28:43] 2025-11-25 15:28:43,431 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:28:43] 2025-11-25 15:28:43,449 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:28:43]  *** Error codes and diagnostics ***
[2025-11-25 10:28:43]     "exeErrorCode": 0,
[2025-11-25 10:28:43]     "exeErrorDiag": "",
[2025-11-25 10:28:43]     "pilotErrorCode": 0,
[2025-11-25 10:28:43]     "pilotErrorDiag": "",
[2025-11-25 10:28:43]  *** Listing of results directory ***
[2025-11-25 10:28:43] total 1337708
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 12:17 pilot3.tar.gz
[2025-11-25 10:28:43] -rwx------. 1 boincer umatlas     36292 Nov 22 12:27 runpilot2-wrapper.sh
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 12:27 queuedata.json
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas       100 Nov 23 21:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:28:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 21:15 run_atlas
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas       105 Nov 23 21:15 job.xml
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas 408853824 Nov 23 21:15 EVNT.47483658._000449.pool.root.1
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:15 start_atlas.sh
[2025-11-25 10:28:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 21:15 shared
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 21:15 input.tar.gz
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas         0 Nov 23 21:15 boinc_lockfile
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas      2784 Nov 23 21:15 pandaJob.out
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas        57 Nov 23 21:15 setup.sh.local
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas    989786 Nov 23 21:15 agis_schedconf.cvmfs.json
[2025-11-25 10:28:43] drwx------. 5 boincer umatlas      4096 Nov 23 21:15 pilot3
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas       534 Nov 25 09:58 boinc_task_state.xml
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas      6881 Nov 25 10:22 init_data.xml
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas 919031079 Nov 25 10:25 HITS.47556137._004445.pool.root.1
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas      1074 Nov 25 10:26 memory_monitor_summary.json
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas   1516240 Nov 25 10:26 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas   2943471 Nov 25 10:26 log.47556137._004445.job.log.tgz.1
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas        95 Nov 25 10:27 pilot_heartbeat.json
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas      8623 Nov 25 10:27 heartbeat.json
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas      4824 Nov 25 10:28 pilotlog.txt
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 10:28 boinc_mmap_file
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas        30 Nov 25 10:28 wrapper_checkpoint.txt
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas  16063399 Nov 25 10:28 log.47556137._004445.job.log.1
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas       353 Nov 25 10:28 output.list
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas       620 Nov 25 10:28 runtime_log
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas  19025920 Nov 25 10:28 result.tar.gz
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas      9354 Nov 25 10:28 runtime_log.err
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas       665 Nov 25 10:28 p18MDmKZ6g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm2CIKDmnnNATm.diag
[2025-11-25 10:28:43] -rw-r--r--. 1 boincer umatlas     21778 Nov 25 10:28 stderr.txt
[2025-11-25 10:28:43] HITS file was successfully produced:
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas 919031079 Nov 25 10:25 shared/HITS.pool.root.1
[2025-11-25 10:28:43]  *** Contents of shared directory: ***
[2025-11-25 10:28:43] total 1315948
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas 408853824 Nov 23 21:15 ATLAS.root_0
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 21:15 start_atlas.sh
[2025-11-25 10:28:43] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 21:15 input.tar.gz
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas 919031079 Nov 25 10:25 HITS.pool.root.1
[2025-11-25 10:28:43] -rw-------. 1 boincer umatlas  19025920 Nov 25 10:28 result.tar.gz
10:28:45 (460264): run_atlas exited; CPU time 271823.676346
10:28:45 (460264): called boinc_finish(0)

</stderr_txt>
]]>

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