Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:10 (800678): wrapper (7.7.26015): starting
03:04:10 (800678): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 03:04:10] Arguments: --nthreads 3
[2025-11-24 03:04:10] Threads: 3
[2025-11-24 03:04:10] Checking for CVMFS
[2025-11-24 03:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:04:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:04:11] 2.9.2.0 154488 138 61684 153228 1 88 34934143 36864001 0 130560 0 1940665 100.000 2605 2346 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 03:04:11] CVMFS is ok
[2025-11-24 03:04:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 03:04:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 03:04:11] Further information can be found at the LHC@home message board.
[2025-11-24 03:04:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:04:11] Checking for apptainer binary...
[2025-11-24 03:04:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:04:11] Running /usr/bin/apptainer --version
[2025-11-24 03:04:11] apptainer version 1.4.1-1.1
[2025-11-24 03:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:04:11] thA335
[2025-11-24 03:04:11] apptainer works
[2025-11-24 03:04:11] Set ATHENA_PROC_NUMBER=3
[2025-11-24 03:04:11] Set ATHENA_CORE_NUMBER=3
[2025-11-24 03:04:11] Starting ATLAS job with PandaID=6895355127
[2025-11-24 03:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:08:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:08:27] 2025-11-24 02:07:31,976 | INFO     | architecture information:
[2025-11-24 03:08:27] 2025-11-24 02:07:31,977 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:08:27] 2025-11-24 02:07:31,987 | INFO     | cat /etc/os-release:
[2025-11-24 03:08:27] NAME="CentOS Linux"
[2025-11-24 03:08:27] VERSION="7 (Core)"
[2025-11-24 03:08:27] ID="centos"
[2025-11-24 03:08:27] ID_LIKE="rhel fedora"
[2025-11-24 03:08:27] VERSION_ID="7"
[2025-11-24 03:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:08:27] ANSI_COLOR="0;31"
[2025-11-24 03:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:08:27] HOME_URL="https://www.centos.org/"
[2025-11-24 03:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:08:27] 
[2025-11-24 03:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:08:27] 
[2025-11-24 03:08:27] 2025-11-24 02:07:31,987 | INFO     | ***************************************
[2025-11-24 03:08:27] 2025-11-24 02:07:32,491 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | INFO     | sufficient remaining disk space (827105214464 B)
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | INFO     | update_server=False
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 03:08:27] 2025-11-24 02:07:32,505 | INFO     | aborting loop
[2025-11-24 03:08:27] 2025-11-24 02:07:32,506 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:08:27] 2025-11-24 02:07:32,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:08:27] 2025-11-24 02:07:32,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:08:27] 2025-11-24 02:07:33,201 | INFO     | all data control threads have been joined
[2025-11-24 03:08:27] 2025-11-24 02:07:33,511 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:33,512 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:33,512 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:33,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:08:27] 2025-11-24 02:07:33,832 | INFO     | all payload control threads have been joined
[2025-11-24 03:08:27] 2025-11-24 02:07:33,982 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:33,992 | INFO     | all job control threads have been joined
[2025-11-24 03:08:27] 2025-11-24 02:07:34,002 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:08:27] 2025-11-24 02:07:34,166 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,198 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,206 | INFO     | [data] control thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,231 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,770 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,812 | INFO     | [job] validate thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,838 | INFO     | [payload] control thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,896 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,959 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:34,998 | INFO     | [job] control thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:35,788 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:07:38,009 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:08:27] 2025-11-24 02:08:21,092 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:08:27] 2025-11-24 02:08:22,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727822907200)>', '<ExcThread(monitor, started 139727449593600)>']
[2025-11-24 03:08:27] 2025-11-24 02:08:22,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:08:27] 2025-11-24 02:08:22,767 | INFO     | [monitor] control thread has ended
[2025-11-24 03:08:27] 2025-11-24 02:08:27,103 | INFO     | all workflow threads have been joined
[2025-11-24 03:08:27] 2025-11-24 02:08:27,104 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:08:27] 2025-11-24 02:08:27,104 | INFO     | traces error code: 0
[2025-11-24 03:08:27] 2025-11-24 02:08:27,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:08:27] 2025-11-24 02:08:27,153 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:08:27] 2025-11-24 02:08:27,156 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:08:27] 2025-11-24 02:08:27,159 [wrapper] pilotpid: 804414
[2025-11-24 03:08:27] 2025-11-24 02:08:27,162 [wrapper] Pilot exit status: 0
[2025-11-24 03:08:27] 2025-11-24 02:08:27,169 [wrapper] pandaids: 6895355127
[2025-11-24 03:08:27] 2025-11-24 02:08:27,187 [wrapper] cleanup supervisor_pilot  804420 804415
[2025-11-24 03:08:27] 2025-11-24 02:08:27,190 [wrapper] Test setup, not cleaning
[2025-11-24 03:08:27] 2025-11-24 02:08:27,193 [wrapper] apfmon messages muted
[2025-11-24 03:08:27] 2025-11-24 02:08:27,195 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:08:27] 2025-11-24 02:08:27,198 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:08:27]  *** Error codes and diagnostics ***
[2025-11-24 03:08:27]     "exeErrorCode": 65,
[2025-11-24 03:08:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 03:08:27]     "pilotErrorCode": 1305,
[2025-11-24 03:08:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 03:08:27]  *** Listing of results directory ***
[2025-11-24 03:08:27] total 404100
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc    576529 Nov 23 06:47 pilot3.tar.gz
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      5112 Nov 23 07:00 queuedata.json
[2025-11-24 03:08:27] -rwx------ 1 boinc boinc     36292 Nov 23 07:00 runpilot2-wrapper.sh
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc       100 Nov 24 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:08:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 03:04 run_atlas
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc       105 Nov 24 03:04 job.xml
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc 409605471 Nov 24 03:04 EVNT.47483658._000644.pool.root.1
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc    590096 Nov 24 03:04 input.tar.gz
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:04 start_atlas.sh
[2025-11-24 03:08:27] drwxrwx--x 2 boinc boinc      4096 Nov 24 03:04 shared
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc         0 Nov 24 03:04 boinc_setup_complete
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      6195 Nov 24 03:04 init_data.xml
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc         0 Nov 24 03:04 boinc_lockfile
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      2785 Nov 24 03:04 pandaJob.out
[2025-11-24 03:08:27] -rw------- 1 boinc boinc    989786 Nov 24 03:04 agis_schedconf.cvmfs.json
[2025-11-24 03:08:27] -rw------- 1 boinc boinc   1526164 Nov 24 03:04 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:08:27] drwx------ 5 boinc boinc      4096 Nov 24 03:04 pilot3
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc       522 Nov 24 03:05 boinc_task_state.xml
[2025-11-24 03:08:27] -rw------- 1 boinc boinc       965 Nov 24 03:05 memory_monitor_summary.json
[2025-11-24 03:08:27] -rw------- 1 boinc boinc     55511 Nov 24 03:05 log.47556137._006399.job.log.tgz.1
[2025-11-24 03:08:27] -rw------- 1 boinc boinc        95 Nov 24 03:07 pilot_heartbeat.json
[2025-11-24 03:08:27] -rw------- 1 boinc boinc      8384 Nov 24 03:07 heartbeat.json
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      8192 Nov 24 03:08 boinc_mmap_file
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc        22 Nov 24 03:08 wrapper_checkpoint.txt
[2025-11-24 03:08:27] -rw------- 1 boinc boinc      4556 Nov 24 03:08 pilotlog.txt
[2025-11-24 03:08:27] -rw------- 1 boinc boinc     91433 Nov 24 03:08 log.47556137._006399.job.log.1
[2025-11-24 03:08:27] -rw------- 1 boinc boinc       186 Nov 24 03:08 output.list
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc       620 Nov 24 03:08 runtime_log
[2025-11-24 03:08:27] -rw------- 1 boinc boinc    163840 Nov 24 03:08 result.tar.gz
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      8744 Nov 24 03:08 runtime_log.err
[2025-11-24 03:08:27] -rw------- 1 boinc boinc       649 Nov 24 03:08 5JxLDmMKIh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7gKKDmH5PaMo.diag
[2025-11-24 03:08:27] -rw-r--r-- 1 boinc boinc      9261 Nov 24 03:08 stderr.txt
[2025-11-24 03:08:27] No HITS result produced
[2025-11-24 03:08:27]  *** Contents of shared directory: ***
[2025-11-24 03:08:27] total 400764
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc 409605471 Nov 24 03:04 ATLAS.root_0
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc    590096 Nov 24 03:04 input.tar.gz
[2025-11-24 03:08:27] -rw-r--r-- 2 boinc boinc     15847 Nov 24 03:04 start_atlas.sh
[2025-11-24 03:08:27] -rw------- 1 boinc boinc    163840 Nov 24 03:08 result.tar.gz
03:08:29 (800678): run_atlas exited; CPU time 30.881626
03:08:29 (800678): called boinc_finish(0)

</stderr_txt>
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