Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:43:13 (4061745): wrapper (7.7.26015): starting
00:43:13 (4061745): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 00:43:13] Arguments: --nthreads 9
[2025-11-24 00:43:13] Threads: 9
[2025-11-24 00:43:13] Checking for CVMFS
[2025-11-24 00:43:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 00:43:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 00:43:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 00:43:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 00:43:13] 2.13.3.0 3025293 5667 92968 153235 1 81 13609610 37030912 1951 16776704 0 6271105 99.909 660935 16309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 00:43:13] CVMFS is ok
[2025-11-24 00:43:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 00:43:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 00:43:13] Further information can be found at the LHC@home message board.
[2025-11-24 00:43:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 00:43:13] Checking for apptainer binary...
[2025-11-24 00:43:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 00:43:13] Running /usr/bin/apptainer --version
[2025-11-24 00:43:13] apptainer version 1.4.4-1.el9
[2025-11-24 00:43:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 00:43:13] c-205-37.aglt2.org
[2025-11-24 00:43:13] apptainer works
[2025-11-24 00:43:13] Set ATHENA_PROC_NUMBER=9
[2025-11-24 00:43:13] Set ATHENA_CORE_NUMBER=9
[2025-11-24 00:43:13] Starting ATLAS job with PandaID=6895323686
[2025-11-24 00:43:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 09:48:21]  *** The last 200 lines of the pilot log: ***
[2025-11-24 09:48:21] 2025-11-24 14:47:23,747 | INFO     | monitor loop #2423: job 0:6895323686 is in state 'finished'
[2025-11-24 09:48:21] 2025-11-24 14:47:23,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 09:48:21] 2025-11-24 14:47:24,325 | INFO     | time since job start (32640s) is within the limit (172800.0s)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,753 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 09:48:21] 2025-11-24 14:47:25,759 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2618.91575
[2025-11-24 09:48:21] 2025-11-24 14:47:25,765 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895323686/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,766 | INFO     | extracted standard info from prmon json
[2025-11-24 09:48:21] 2025-11-24 14:47:25,766 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 09:48:21] 2025-11-24 14:47:25,766 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 09:48:21] 2025-11-24 14:47:25,777 | INFO     | fitting pss+swap vs Time
[2025-11-24 09:48:21] 2025-11-24 14:47:25,778 | INFO     | sum of square deviations: 47482868362.953354
[2025-11-24 09:48:21] 2025-11-24 14:47:25,785 | INFO     | sum of deviations: 539765994908.85974
[2025-11-24 09:48:21] 2025-11-24 14:47:25,786 | INFO     | mean x: 1763979315.0093458
[2025-11-24 09:48:21] 2025-11-24 14:47:25,786 | INFO     | mean y: 3119103.028037383
[2025-11-24 09:48:21] 2025-11-24 14:47:25,786 | INFO     | intersect: -20049082518.12624
[2025-11-24 09:48:21] 2025-11-24 14:47:25,787 | INFO     | chi2: 4.938090945875137
[2025-11-24 09:48:21] 2025-11-24 14:47:25,788 | INFO     | sum of square deviations: 46163970740.45292
[2025-11-24 09:48:21] 2025-11-24 14:47:25,795 | INFO     | sum of deviations: 722049278185.5842
[2025-11-24 09:48:21] 2025-11-24 14:47:25,795 | INFO     | mean x: 1763979162.509434
[2025-11-24 09:48:21] 2025-11-24 14:47:25,796 | INFO     | mean y: 3140159.983018868
[2025-11-24 09:48:21] 2025-11-24 14:47:25,796 | INFO     | intersect: -27587204877.391296
[2025-11-24 09:48:21] 2025-11-24 14:47:25,796 | INFO     | chi2: 2.0682996593597385
[2025-11-24 09:48:21] 2025-11-24 14:47:25,797 | INFO     | current chi2=2.0682996593597385 (change=58.11539961435055 %)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,797 | INFO     | sum of square deviations: 44869724742.95255
[2025-11-24 09:48:21] 2025-11-24 14:47:25,805 | INFO     | sum of deviations: 726299976912.2479
[2025-11-24 09:48:21] 2025-11-24 14:47:25,805 | INFO     | mean x: 1763979010.0095239
[2025-11-24 09:48:21] 2025-11-24 14:47:25,805 | INFO     | mean y: 3140645.7504761904
[2025-11-24 09:48:21] 2025-11-24 14:47:25,805 | INFO     | intersect: -28550141585.93593
[2025-11-24 09:48:21] 2025-11-24 14:47:25,806 | INFO     | chi2: 1.9700173837117891
[2025-11-24 09:48:21] 2025-11-24 14:47:25,806 | INFO     | current chi2=1.9700173837117891 (change=4.7518392803088085 %)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,806 | INFO     | right removable region: 524
[2025-11-24 09:48:21] 2025-11-24 14:47:25,807 | INFO     | sum of square deviations: 46163967690.45292
[2025-11-24 09:48:21] 2025-11-24 14:47:25,815 | INFO     | sum of deviations: 403748432828.604
[2025-11-24 09:48:21] 2025-11-24 14:47:25,815 | INFO     | mean x: 1763979467.509434
[2025-11-24 09:48:21] 2025-11-24 14:47:25,815 | INFO     | mean y: 3134782.179245283
[2025-11-24 09:48:21] 2025-11-24 14:47:25,815 | INFO     | intersect: -15424567410.23995
[2025-11-24 09:48:21] 2025-11-24 14:47:25,816 | INFO     | chi2: 3.1105425486935765
[2025-11-24 09:48:21] 2025-11-24 14:47:25,816 | INFO     | current chi2=3.1105425486935765 (change=37.00920896785305 %)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,817 | INFO     | sum of square deviations: 44869718642.95255
[2025-11-24 09:48:21] 2025-11-24 14:47:25,825 | INFO     | sum of deviations: 371363341594.8278
[2025-11-24 09:48:21] 2025-11-24 14:47:25,825 | INFO     | mean x: 1763979620.0095239
[2025-11-24 09:48:21] 2025-11-24 14:47:25,825 | INFO     | mean y: 3138594.4342857143
[2025-11-24 09:48:21] 2025-11-24 14:47:25,825 | INFO     | intersect: -14596403947.934671
[2025-11-24 09:48:21] 2025-11-24 14:47:25,826 | INFO     | chi2: 3.0783290019963205
[2025-11-24 09:48:21] 2025-11-24 14:47:25,826 | INFO     | current chi2=3.0783290019963205 (change=1.0356246922513759 %)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,826 | INFO     | left removable region: 20
[2025-11-24 09:48:21] 2025-11-24 14:47:25,827 | INFO     | sum of square deviations: 39697858529.968285
[2025-11-24 09:48:21] 2025-11-24 14:47:25,834 | INFO     | sum of deviations: 520777568945.95233
[2025-11-24 09:48:21] 2025-11-24 14:47:25,834 | INFO     | mean x: 1763979589.5079365
[2025-11-24 09:48:21] 2025-11-24 14:47:25,834 | INFO     | mean y: 3164984.886904762
[2025-11-24 09:48:21] 2025-11-24 14:47:25,834 | INFO     | intersect: -23137655107.479828
[2025-11-24 09:48:21] 2025-11-24 14:47:25,835 | INFO     | chi2: 0.0841993689092195
[2025-11-24 09:48:21] 2025-11-24 14:47:25,835 | INFO     | current memory leak: 13.12 B/s (using 504 data points, chi2=0.08)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,836 | INFO     | could have reported an average CPU frequency of 2613 MHz (22 samples)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,836 | INFO     | ..............................
[2025-11-24 09:48:21] 2025-11-24 14:47:25,836 | INFO     | . Timing measurements:
[2025-11-24 09:48:21] 2025-11-24 14:47:25,836 | INFO     | . get job = 0 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . initial setup = 2 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . payload setup = 5 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . stage-in = 0 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . payload execution = 32609 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . stage-out = 3 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | . log creation = 0 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,837 | INFO     | ..............................
[2025-11-24 09:48:21] 2025-11-24 14:47:25,942 | INFO     | 
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | job summary report
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | --------------------------------------------------
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | PanDA job id: 6895323686
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | task id: 47556149
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | errors: (none)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | pilot state: finished 
[2025-11-24 09:48:21] 2025-11-24 14:47:25,943 | INFO     | transexitcode: 0
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | exeerrorcode: 0
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | exeerrordiag: 
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | exitcode: 0
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | exitmsg: OK
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | cpuconsumptiontime: 288680 s
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | nevents: 1000
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | neventsw: 0
[2025-11-24 09:48:21] 2025-11-24 14:47:25,944 | INFO     | pid: 4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | pgrp: 4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | corecount: 9
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | event service: False
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | sizes: {0: 2298629, 1: 2298828, 5: 2299090, 12: 2299146, 32618: 2339425, 32623: 2349394, 32627: 2349584}
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | --------------------------------------------------
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | 
[2025-11-24 09:48:21] 2025-11-24 14:47:25,945 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 09:48:21] 2025-11-24 14:47:25,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,962 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,962 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 09:48:21] 2025-11-24 14:47:25,965 | INFO     | job 6895323686 has completed (purged errors)
[2025-11-24 09:48:21] 2025-11-24 14:47:25,965 | INFO     | overall cleanup function is called
[2025-11-24 09:48:21] 2025-11-24 14:47:26,982 | INFO     | --- collectZombieJob: --- 10, [4072185]
[2025-11-24 09:48:21] 2025-11-24 14:47:26,982 | INFO     | zombie collector waiting for pid 4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:26,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 09:48:21] 2025-11-24 14:47:26,982 | INFO     | collected zombie processes
[2025-11-24 09:48:21] 2025-11-24 14:47:26,983 | INFO     | will attempt to kill all subprocesses of pid=4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:27,181 | INFO     | process IDs to be killed: [4072185] (in reverse order)
[2025-11-24 09:48:21] 2025-11-24 14:47:27,234 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 09:48:21] 2025-11-24 14:47:27,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 09:48:21] 2025-11-24 14:47:27,240 | INFO     | did not find any defunct processes belonging to 4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:27,245 | INFO     | did not find any defunct processes belonging to 4072185
[2025-11-24 09:48:21] 2025-11-24 14:47:27,246 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 09:48:21] 2025-11-24 14:47:27,247 | INFO     | ready for new job
[2025-11-24 09:48:21] 2025-11-24 14:47:27,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 09:48:21] 2025-11-24 14:47:27,250 | INFO     | ***************************************
[2025-11-24 09:48:21] 2025-11-24 14:47:27,250 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 09:48:21] 2025-11-24 14:47:27,251 | INFO     | ***************************************
[2025-11-24 09:48:21] 2025-11-24 14:47:27,251 | INFO     | 
[2025-11-24 09:48:21] 2025-11-24 14:47:27,253 | INFO     | architecture information:
[2025-11-24 09:48:21] 2025-11-24 14:47:27,253 | INFO     | executing command: cat /etc/os-release
[2025-11-24 09:48:21] 2025-11-24 14:47:27,266 | INFO     | cat /etc/os-release:
[2025-11-24 09:48:21] NAME="CentOS Linux"
[2025-11-24 09:48:21] VERSION="7 (Core)"
[2025-11-24 09:48:21] ID="centos"
[2025-11-24 09:48:21] ID_LIKE="rhel fedora"
[2025-11-24 09:48:21] VERSION_ID="7"
[2025-11-24 09:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 09:48:21] ANSI_COLOR="0;31"
[2025-11-24 09:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 09:48:21] HOME_URL="https://www.centos.org/"
[2025-11-24 09:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 09:48:21] 
[2025-11-24 09:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 09:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 09:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 09:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 09:48:21] 
[2025-11-24 09:48:21] 2025-11-24 14:47:27,266 | INFO     | ***************************************
[2025-11-24 09:48:21] 2025-11-24 14:47:27,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 09:48:21] 2025-11-24 14:47:27,783 | INFO     | sufficient remaining disk space (38788923392 B)
[2025-11-24 09:48:21] 2025-11-24 14:47:27,784 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 09:48:21] 2025-11-24 14:47:27,784 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 09:48:21] 2025-11-24 14:47:27,784 | INFO     | update_server=False
[2025-11-24 09:48:21] 2025-11-24 14:47:27,784 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 09:48:21] 2025-11-24 14:47:27,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:48:21] 2025-11-24 14:47:27,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 09:48:21] 2025-11-24 14:47:27,785 | INFO     | aborting loop
[2025-11-24 09:48:21] 2025-11-24 14:47:27,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 09:48:21] 2025-11-24 14:47:28,029 | INFO     | all data control threads have been joined
[2025-11-24 09:48:21] 2025-11-24 14:47:28,091 | INFO     | all payload control threads have been joined
[2025-11-24 09:48:21] 2025-11-24 14:47:28,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 09:48:21] 2025-11-24 14:47:28,790 | INFO     | [job] retrieve thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:28,790 | INFO     | [job] queue monitor thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:28,790 | INFO     | [job] job monitor thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:28,865 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,034 | INFO     | [data] control thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,097 | INFO     | [payload] control thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,153 | INFO     | all job control threads have been joined
[2025-11-24 09:48:21] 2025-11-24 14:47:29,301 | INFO     | [data] copytool_in thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,301 | INFO     | [job] validate thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,735 | INFO     | [payload] validate_post thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,802 | INFO     | [payload] failed_post thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,804 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:29,909 | INFO     | [data] copytool_out thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:30,086 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:30,158 | INFO     | [job] control thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:32,510 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 09:48:21] 2025-11-24 14:47:57,645 | INFO     | PID=4065789 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 09:48:21] 2025-11-24 14:47:57,645 | INFO     | .. there are 3 such processes running
[2025-11-24 09:48:21] 2025-11-24 14:47:57,646 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 09:48:21] 2025-11-24 14:47:57,646 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 09:48:21] 2025-11-24 14:47:57,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 09:48:21] 2025-11-24 14:48:15,709 | INFO     | [monitor] cgroup control has ended
[2025-11-24 09:48:21] 2025-11-24 14:48:16,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771263059776)>', '<ExcThread(monitor, started 139770625771264)>']
[2025-11-24 09:48:21] 2025-11-24 14:48:16,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 09:48:21] 2025-11-24 14:48:16,736 | INFO     | [monitor] control thread has ended
[2025-11-24 09:48:21] 2025-11-24 14:48:21,675 | INFO     | all workflow threads have been joined
[2025-11-24 09:48:21] 2025-11-24 14:48:21,676 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 09:48:21] 2025-11-24 14:48:21,676 | INFO     | traces error code: 0
[2025-11-24 09:48:21] 2025-11-24 14:48:21,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 09:48:21] 2025-11-24 14:48:21,800 [wrapper] ==== pilot stdout END ====
[2025-11-24 09:48:21] 2025-11-24 14:48:21,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 09:48:21] 2025-11-24 14:48:21,805 [wrapper] pilotpid: 4065789
[2025-11-24 09:48:21] 2025-11-24 14:48:21,808 [wrapper] Pilot exit status: 0
[2025-11-24 09:48:21] 2025-11-24 14:48:21,816 [wrapper] pandaids: 6895323686
[2025-11-24 09:48:21] 2025-11-24 14:48:21,853 [wrapper] cleanup supervisor_pilot  356252 4065790
[2025-11-24 09:48:21] 2025-11-24 14:48:21,856 [wrapper] Test setup, not cleaning
[2025-11-24 09:48:21] 2025-11-24 14:48:21,858 [wrapper] apfmon messages muted
[2025-11-24 09:48:21] 2025-11-24 14:48:21,861 [wrapper] ==== wrapper stdout END ====
[2025-11-24 09:48:21] 2025-11-24 14:48:21,863 [wrapper] ==== wrapper stderr END ====
[2025-11-24 09:48:21]  *** Error codes and diagnostics ***
[2025-11-24 09:48:21]     "exeErrorCode": 0,
[2025-11-24 09:48:21]     "exeErrorDiag": "",
[2025-11-24 09:48:21]     "pilotErrorCode": 0,
[2025-11-24 09:48:21]     "pilotErrorDiag": "",
[2025-11-24 09:48:21]  *** Listing of results directory ***
[2025-11-24 09:48:21] total 1324716
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 07:50 pilot3.tar.gz
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 08:11 queuedata.json
[2025-11-24 09:48:21] -rwx------. 1 boincer umatlas     36292 Nov 21 08:12 runpilot2-wrapper.sh
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas       100 Nov 24 00:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 09:48:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 00:43 run_atlas
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas       105 Nov 24 00:43 job.xml
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas 411738880 Nov 24 00:43 EVNT.47483658._001014.pool.root.1
[2025-11-24 09:48:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 00:43 shared
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:43 input.tar.gz
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:43 start_atlas.sh
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas         0 Nov 24 00:43 boinc_lockfile
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas      2782 Nov 24 00:43 pandaJob.out
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas    989786 Nov 24 00:43 agis_schedconf.cvmfs.json
[2025-11-24 09:48:21] drwx------. 5 boincer umatlas      4096 Nov 24 00:43 pilot3
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas       532 Nov 24 09:40 boinc_task_state.xml
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas      6531 Nov 24 09:45 init_data.xml
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas 927666849 Nov 24 09:46 HITS.47556149._000006.pool.root.1
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas      1046 Nov 24 09:47 memory_monitor_summary.json
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas   1516227 Nov 24 09:47 agis_ddmendpoints.agis.ALL.json
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas   1940858 Nov 24 09:47 log.47556149._000006.job.log.tgz.1
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas      8611 Nov 24 09:47 heartbeat.json
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas        95 Nov 24 09:47 pilot_heartbeat.json
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas        29 Nov 24 09:48 wrapper_checkpoint.txt
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 09:48 boinc_mmap_file
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas      4823 Nov 24 09:48 pilotlog.txt
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas   4654397 Nov 24 09:48 log.47556149._000006.job.log.1
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas       353 Nov 24 09:48 output.list
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas       620 Nov 24 09:48 runtime_log
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas   6615040 Nov 24 09:48 result.tar.gz
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas      8818 Nov 24 09:48 runtime_log.err
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas       659 Nov 24 09:48 6nnMDmi7fg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9cHKDmhywYMn.diag
[2025-11-24 09:48:21] -rw-r--r--. 1 boincer umatlas     21312 Nov 24 09:48 stderr.txt
[2025-11-24 09:48:21] HITS file was successfully produced:
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas 927666849 Nov 24 09:46 shared/HITS.pool.root.1
[2025-11-24 09:48:21]  *** Contents of shared directory: ***
[2025-11-24 09:48:21] total 1315080
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas 411738880 Nov 24 00:43 ATLAS.root_0
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 00:43 input.tar.gz
[2025-11-24 09:48:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 00:43 start_atlas.sh
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas 927666849 Nov 24 09:46 HITS.pool.root.1
[2025-11-24 09:48:21] -rw-------. 1 boincer umatlas   6615040 Nov 24 09:48 result.tar.gz
09:48:23 (4061745): run_atlas exited; CPU time 288987.891639
09:48:23 (4061745): called boinc_finish(0)

</stderr_txt>
]]>

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