Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:42:04 (1684323): wrapper (7.7.26015): starting
02:42:04 (1684323): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 02:42:04] Arguments: --nthreads 12
[2025-11-25 02:42:04] Threads: 12
[2025-11-25 02:42:04] Checking for CVMFS
[2025-11-25 02:42:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 02:42:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 02:42:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 02:42:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 02:42:04] 2.13.3.0 14095 4970 94652 153265 2 253 3704589 4097025 922 130560 0 3887422 99.949 424434 19661 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-25 02:42:04] CVMFS is ok
[2025-11-25 02:42:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 02:42:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 02:42:04] Further information can be found at the LHC@home message board.
[2025-11-25 02:42:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 02:42:04] Checking for apptainer binary...
[2025-11-25 02:42:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 02:42:04] Running /usr/bin/apptainer --version
[2025-11-25 02:42:04] apptainer version 1.4.4-1.el9
[2025-11-25 02:42:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 02:42:05] pckelar7.cern.ch
[2025-11-25 02:42:05] apptainer works
[2025-11-25 02:42:05] Set ATHENA_PROC_NUMBER=12
[2025-11-25 02:42:05] Set ATHENA_CORE_NUMBER=12
[2025-11-25 02:42:05] Starting ATLAS job with PandaID=6895354839
[2025-11-25 02:42:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 14:34:31]  *** The last 200 lines of the pilot log: ***
[2025-11-25 14:34:31] 2025-11-25 13:33:25,176 | INFO     | time since job start (42672s) is within the limit (172800.0s)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,055 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 14:34:31] 2025-11-25 13:33:26,061 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2825.1087916666675
[2025-11-25 14:34:31] 2025-11-25 13:33:26,066 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895354839/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,067 | INFO     | extracted standard info from prmon json
[2025-11-25 14:34:31] 2025-11-25 13:33:26,067 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 14:34:31] 2025-11-25 13:33:26,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 14:34:31] 2025-11-25 13:33:26,088 | INFO     | fitting pss+swap vs Time
[2025-11-25 14:34:31] 2025-11-25 13:33:26,089 | INFO     | sum of square deviations: 105902944253.71953
[2025-11-25 14:34:31] 2025-11-25 13:33:26,105 | INFO     | sum of deviations: 1313333503754.02
[2025-11-25 14:34:31] 2025-11-25 13:33:26,105 | INFO     | mean x: 1764056251.9799714
[2025-11-25 14:34:31] 2025-11-25 13:33:26,105 | INFO     | mean y: 3615819.0014306153
[2025-11-25 14:34:31] 2025-11-25 13:33:26,105 | INFO     | intersect: -21872963671.381054
[2025-11-25 14:34:31] 2025-11-25 13:33:26,107 | INFO     | chi2: 5.95167174799471
[2025-11-25 14:34:31] 2025-11-25 13:33:26,108 | INFO     | sum of square deviations: 103646766681.38339
[2025-11-25 14:34:31] 2025-11-25 13:33:26,124 | INFO     | sum of deviations: 1570562100465.1252
[2025-11-25 14:34:31] 2025-11-25 13:33:26,124 | INFO     | mean x: 1764056099.4870317
[2025-11-25 14:34:31] 2025-11-25 13:33:26,124 | INFO     | mean y: 3633194.4582132567
[2025-11-25 14:34:31] 2025-11-25 13:33:26,125 | INFO     | intersect: -26727153897.680813
[2025-11-25 14:34:31] 2025-11-25 13:33:26,126 | INFO     | chi2: 3.4151536343796622
[2025-11-25 14:34:31] 2025-11-25 13:33:26,126 | INFO     | current chi2=3.4151536343796622 (change=42.61858215668016 %)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,127 | INFO     | sum of square deviations: 101422868783.97687
[2025-11-25 14:34:31] 2025-11-25 13:33:26,143 | INFO     | sum of deviations: 1694390430278.6902
[2025-11-25 14:34:31] 2025-11-25 13:33:26,143 | INFO     | mean x: 1764055946.9941945
[2025-11-25 14:34:31] 2025-11-25 13:33:26,143 | INFO     | mean y: 3641670.1727140783
[2025-11-25 14:34:31] 2025-11-25 13:33:26,143 | INFO     | intersect: -29467024570.09624
[2025-11-25 14:34:31] 2025-11-25 13:33:26,144 | INFO     | chi2: 2.607686065768308
[2025-11-25 14:34:31] 2025-11-25 13:33:26,145 | INFO     | current chi2=2.607686065768308 (change=23.64366746147937 %)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,145 | INFO     | right removable region: 688
[2025-11-25 14:34:31] 2025-11-25 13:33:26,146 | INFO     | sum of square deviations: 103646391227.35582
[2025-11-25 14:34:31] 2025-11-25 13:33:26,162 | INFO     | sum of deviations: 1065417950221.1816
[2025-11-25 14:34:31] 2025-11-25 13:33:26,162 | INFO     | mean x: 1764056404.4855907
[2025-11-25 14:34:31] 2025-11-25 13:33:26,162 | INFO     | mean y: 3632547.1181556196
[2025-11-25 14:34:31] 2025-11-25 13:33:26,163 | INFO     | intersect: -18129727778.171516
[2025-11-25 14:34:31] 2025-11-25 13:33:26,164 | INFO     | chi2: 3.681789441266557
[2025-11-25 14:34:31] 2025-11-25 13:33:26,164 | INFO     | current chi2=3.681789441266557 (change=38.13856682356418 %)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,165 | INFO     | sum of square deviations: 101422287459.85483
[2025-11-25 14:34:31] 2025-11-25 13:33:26,181 | INFO     | sum of deviations: 992238352362.2229
[2025-11-25 14:34:31] 2025-11-25 13:33:26,181 | INFO     | mean x: 1764056556.9854863
[2025-11-25 14:34:31] 2025-11-25 13:33:26,181 | INFO     | mean y: 3637563.322206096
[2025-11-25 14:34:31] 2025-11-25 13:33:26,182 | INFO     | intersect: -17254547155.39544
[2025-11-25 14:34:31] 2025-11-25 13:33:26,183 | INFO     | chi2: 3.595380348103714
[2025-11-25 14:34:31] 2025-11-25 13:33:26,183 | INFO     | current chi2=3.595380348103714 (change=2.3469319617886057 %)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,183 | INFO     | left removable region: 20
[2025-11-25 14:34:31] 2025-11-25 13:33:26,184 | INFO     | sum of square deviations: 92428698587.0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,199 | INFO     | sum of deviations: 1269264297565.4995
[2025-11-25 14:34:31] 2025-11-25 13:33:26,199 | INFO     | mean x: 1764056526.5
[2025-11-25 14:34:31] 2025-11-25 13:33:26,200 | INFO     | mean y: 3670961.624251497
[2025-11-25 14:34:31] 2025-11-25 13:33:26,200 | INFO     | intersect: -24220990882.622227
[2025-11-25 14:34:31] 2025-11-25 13:33:26,201 | INFO     | chi2: 0.20031447514731462
[2025-11-25 14:34:31] 2025-11-25 13:33:26,201 | INFO     | current memory leak: 13.73 B/s (using 668 data points, chi2=0.20)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,202 | INFO     | could have reported an average CPU frequency of 2802 MHz (26 samples)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,203 | INFO     | ..............................
[2025-11-25 14:34:31] 2025-11-25 13:33:26,203 | INFO     | . Timing measurements:
[2025-11-25 14:34:31] 2025-11-25 13:33:26,203 | INFO     | . get job = 0 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,203 | INFO     | . initial setup = 1 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,203 | INFO     | . payload setup = 6 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,204 | INFO     | . stage-in = 0 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,204 | INFO     | . payload execution = 42634 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,204 | INFO     | . stage-out = 2 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,204 | INFO     | . log creation = 0 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,204 | INFO     | ..............................
[2025-11-25 14:34:31] 2025-11-25 13:33:26,363 | INFO     | 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,363 | INFO     | job summary report
[2025-11-25 14:34:31] 2025-11-25 13:33:26,363 | INFO     | --------------------------------------------------
[2025-11-25 14:34:31] 2025-11-25 13:33:26,363 | INFO     | PanDA job id: 6895354839
[2025-11-25 14:34:31] 2025-11-25 13:33:26,364 | INFO     | task id: 47556137
[2025-11-25 14:34:31] 2025-11-25 13:33:26,364 | INFO     | errors: (none)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,364 | INFO     | pilot state: finished 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,365 | INFO     | transexitcode: 0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,365 | INFO     | exeerrorcode: 0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,365 | INFO     | exeerrordiag: 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,365 | INFO     | exitcode: 0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,366 | INFO     | exitmsg: OK
[2025-11-25 14:34:31] 2025-11-25 13:33:26,366 | INFO     | cpuconsumptiontime: 497985 s
[2025-11-25 14:34:31] 2025-11-25 13:33:26,366 | INFO     | nevents: 1000
[2025-11-25 14:34:31] 2025-11-25 13:33:26,366 | INFO     | neventsw: 0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,366 | INFO     | pid: 1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:26,367 | INFO     | pgrp: 1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:26,367 | INFO     | corecount: 12
[2025-11-25 14:34:31] 2025-11-25 13:33:26,367 | INFO     | event service: False
[2025-11-25 14:34:31] 2025-11-25 13:33:26,367 | INFO     | sizes: {0: 2283481, 1: 2284166, 2: 2284365, 6: 2284627, 13: 2284655, 42644: 2328522, 42645: 2328649, 42648: 2337704, 42649: 2337760, 42655: 2338006}
[2025-11-25 14:34:31] 2025-11-25 13:33:26,368 | INFO     | --------------------------------------------------
[2025-11-25 14:34:31] 2025-11-25 13:33:26,368 | INFO     | 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,368 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-25 14:34:31] 2025-11-25 13:33:26,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,389 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,393 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,393 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,394 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,394 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,394 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,394 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 14:34:31] 2025-11-25 13:33:26,395 | INFO     | job 6895354839 has completed (purged errors)
[2025-11-25 14:34:31] 2025-11-25 13:33:26,395 | INFO     | overall cleanup function is called
[2025-11-25 14:34:31] 2025-11-25 13:33:26,599 | INFO     | PID=1688158 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 14:34:31] 2025-11-25 13:33:26,599 | INFO     | .. there are 2 such processes running
[2025-11-25 14:34:31] 2025-11-25 13:33:27,427 | INFO     | --- collectZombieJob: --- 10, [1695633]
[2025-11-25 14:34:31] 2025-11-25 13:33:27,427 | INFO     | zombie collector waiting for pid 1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:27,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 14:34:31] 2025-11-25 13:33:27,428 | INFO     | collected zombie processes
[2025-11-25 14:34:31] 2025-11-25 13:33:27,428 | INFO     | will attempt to kill all subprocesses of pid=1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:27,600 | INFO     | process IDs to be killed: [1695633] (in reverse order)
[2025-11-25 14:34:31] 2025-11-25 13:33:27,655 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 14:34:31] 2025-11-25 13:33:27,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 14:34:31] 2025-11-25 13:33:27,662 | INFO     | did not find any defunct processes belonging to 1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:27,669 | INFO     | did not find any defunct processes belonging to 1695633
[2025-11-25 14:34:31] 2025-11-25 13:33:27,671 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 14:34:31] 2025-11-25 13:33:27,671 | INFO     | ready for new job
[2025-11-25 14:34:31] 2025-11-25 13:33:27,671 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 14:34:31] 2025-11-25 13:33:27,675 | INFO     | ***************************************
[2025-11-25 14:34:31] 2025-11-25 13:33:27,675 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 14:34:31] 2025-11-25 13:33:27,675 | INFO     | ***************************************
[2025-11-25 14:34:31] 2025-11-25 13:33:27,675 | INFO     | 
[2025-11-25 14:34:31] 2025-11-25 13:33:27,677 | INFO     | architecture information:
[2025-11-25 14:34:31] 2025-11-25 13:33:27,677 | INFO     | executing command: cat /etc/os-release
[2025-11-25 14:34:31] 2025-11-25 13:33:27,690 | INFO     | cat /etc/os-release:
[2025-11-25 14:34:31] NAME="CentOS Linux"
[2025-11-25 14:34:31] VERSION="7 (Core)"
[2025-11-25 14:34:31] ID="centos"
[2025-11-25 14:34:31] ID_LIKE="rhel fedora"
[2025-11-25 14:34:31] VERSION_ID="7"
[2025-11-25 14:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 14:34:31] ANSI_COLOR="0;31"
[2025-11-25 14:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 14:34:31] HOME_URL="https://www.centos.org/"
[2025-11-25 14:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 14:34:31] 
[2025-11-25 14:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 14:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 14:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 14:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 14:34:31] 
[2025-11-25 14:34:31] 2025-11-25 13:33:27,691 | INFO     | ***************************************
[2025-11-25 14:34:31] 2025-11-25 13:33:28,194 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-25 14:34:31] 2025-11-25 13:33:28,210 | INFO     | sufficient remaining disk space (1783125508096 B)
[2025-11-25 14:34:31] 2025-11-25 13:33:28,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 14:34:31] 2025-11-25 13:33:28,211 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 14:34:31] 2025-11-25 13:33:28,211 | INFO     | update_server=False
[2025-11-25 14:34:31] 2025-11-25 13:33:28,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 14:34:31] 2025-11-25 13:33:28,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:34:31] 2025-11-25 13:33:28,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 14:34:31] 2025-11-25 13:33:28,213 | INFO     | aborting loop
[2025-11-25 14:34:31] 2025-11-25 13:33:28,936 | INFO     | all payload control threads have been joined
[2025-11-25 14:34:31] 2025-11-25 13:33:28,941 | INFO     | all job control threads have been joined
[2025-11-25 14:34:31] 2025-11-25 13:33:29,021 | INFO     | all data control threads have been joined
[2025-11-25 14:34:31] 2025-11-25 13:33:29,213 | INFO     | [job] retrieve thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,218 | INFO     | [job] queue monitor thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,218 | INFO     | [job] job monitor thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,294 | INFO     | [job] validate thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 14:34:31] 2025-11-25 13:33:29,471 | INFO     | [data] copytool_in thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,516 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,599 | INFO     | [payload] validate_post thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,797 | INFO     | [payload] failed_post thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,941 | INFO     | [payload] control thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:29,947 | INFO     | [job] control thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:30,027 | INFO     | [data] control thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:30,098 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:30,100 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:30,400 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:30,961 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 14:34:31] 2025-11-25 13:33:31,305 | INFO     | [data] copytool_out thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:34,962 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 14:34:31] 2025-11-25 13:33:58,870 | INFO     | PID=1688158 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 14:34:31] 2025-11-25 13:33:58,871 | INFO     | .. there are 2 such processes running
[2025-11-25 14:34:31] 2025-11-25 13:33:58,872 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 14:34:31] 2025-11-25 13:33:58,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 14:34:31] 2025-11-25 13:33:58,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 14:34:31] 2025-11-25 13:34:24,338 | INFO     | [monitor] cgroup control has ended
[2025-11-25 14:34:31] 2025-11-25 13:34:25,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040878737216)>', '<ExcThread(monitor, started 140040378226432)>']
[2025-11-25 14:34:31] 2025-11-25 13:34:26,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 14:34:31] 2025-11-25 13:34:26,006 | INFO     | [monitor] control thread has ended
[2025-11-25 14:34:31] 2025-11-25 13:34:30,870 | INFO     | all workflow threads have been joined
[2025-11-25 14:34:31] 2025-11-25 13:34:30,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 14:34:31] 2025-11-25 13:34:30,871 | INFO     | traces error code: 0
[2025-11-25 14:34:31] 2025-11-25 13:34:30,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 14:34:31] 2025-11-25 13:34:31,007 [wrapper] ==== pilot stdout END ====
[2025-11-25 14:34:31] 2025-11-25 13:34:31,009 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 14:34:31] 2025-11-25 13:34:31,012 [wrapper] pilotpid: 1688158
[2025-11-25 14:34:31] 2025-11-25 13:34:31,015 [wrapper] Pilot exit status: 0
[2025-11-25 14:34:31] 2025-11-25 13:34:31,024 [wrapper] pandaids: 6895354839
[2025-11-25 14:34:31] 2025-11-25 13:34:31,061 [wrapper] cleanup supervisor_pilot 1919108 1688159
[2025-11-25 14:34:31] 2025-11-25 13:34:31,063 [wrapper] Test setup, not cleaning
[2025-11-25 14:34:31] 2025-11-25 13:34:31,066 [wrapper] apfmon messages muted
[2025-11-25 14:34:31] 2025-11-25 13:34:31,068 [wrapper] ==== wrapper stdout END ====
[2025-11-25 14:34:31] 2025-11-25 13:34:31,071 [wrapper] ==== wrapper stderr END ====
[2025-11-25 14:34:31]  *** Error codes and diagnostics ***
[2025-11-25 14:34:31]     "exeErrorCode": 0,
[2025-11-25 14:34:31]     "exeErrorDiag": "",
[2025-11-25 14:34:31]     "pilotErrorCode": 0,
[2025-11-25 14:34:31]     "pilotErrorDiag": "",
[2025-11-25 14:34:31]  *** Listing of results directory ***
[2025-11-25 14:34:31] total 1307592
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc    576529 Nov 23 06:21 pilot3.tar.gz
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc      5112 Nov 23 06:42 queuedata.json
[2025-11-25 14:34:31] -rwx------ 1 boinc boinc     36292 Nov 23 06:42 runpilot2-wrapper.sh
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc       100 Nov 25 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 14:34:31] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 02:42 run_atlas
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc       105 Nov 25 02:42 job.xml
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc      6252 Nov 25 02:42 init_data.xml
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc 411810598 Nov 25 02:42 EVNT.47483658._000638.pool.root.1
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:42 start_atlas.sh
[2025-11-25 14:34:31] drwxrwx--x 2 boinc boinc      4096 Nov 25 02:42 shared
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc    590099 Nov 25 02:42 input.tar.gz
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc         0 Nov 25 02:42 boinc_lockfile
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc      2785 Nov 25 02:42 pandaJob.out
[2025-11-25 14:34:31] -rw------- 1 boinc boinc    991801 Nov 25 02:42 agis_schedconf.cvmfs.json
[2025-11-25 14:34:31] drwx------ 5 boinc boinc      4096 Nov 25 02:42 pilot3
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc       533 Nov 25 14:22 boinc_task_state.xml
[2025-11-25 14:34:31] -rw------- 1 boinc boinc 906671058 Nov 25 14:32 HITS.47556137._006334.pool.root.1
[2025-11-25 14:34:31] -rw------- 1 boinc boinc      1034 Nov 25 14:33 memory_monitor_summary.json
[2025-11-25 14:34:31] -rw------- 1 boinc boinc   1516240 Nov 25 14:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 14:34:31] -rw------- 1 boinc boinc   2388451 Nov 25 14:33 log.47556137._006334.job.log.tgz.1
[2025-11-25 14:34:31] -rw------- 1 boinc boinc      8622 Nov 25 14:33 heartbeat.json
[2025-11-25 14:34:31] -rw------- 1 boinc boinc        95 Nov 25 14:33 pilot_heartbeat.json
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc        29 Nov 25 14:34 wrapper_checkpoint.txt
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc      8192 Nov 25 14:34 boinc_mmap_file
[2025-11-25 14:34:31] -rw------- 1 boinc boinc      4825 Nov 25 14:34 pilotlog.txt
[2025-11-25 14:34:31] -rw------- 1 boinc boinc   5898034 Nov 25 14:34 log.47556137._006334.job.log.1
[2025-11-25 14:34:31] -rw------- 1 boinc boinc       353 Nov 25 14:34 output.list
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc       620 Nov 25 14:34 runtime_log
[2025-11-25 14:34:31] -rw------- 1 boinc boinc   8304640 Nov 25 14:34 result.tar.gz
[2025-11-25 14:34:31] -rw------- 1 boinc boinc       665 Nov 25 14:34 UuVKDmj2Hh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPgKKDmFnnFRn.diag
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc      8842 Nov 25 14:34 runtime_log.err
[2025-11-25 14:34:31] -rw-r--r-- 1 boinc boinc     21407 Nov 25 14:34 stderr.txt
[2025-11-25 14:34:31] HITS file was successfully produced:
[2025-11-25 14:34:31] -rw------- 1 boinc boinc 906671058 Nov 25 14:32 shared/HITS.pool.root.1
[2025-11-25 14:34:31]  *** Contents of shared directory: ***
[2025-11-25 14:34:31] total 1296300
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc 411810598 Nov 25 02:42 ATLAS.root_0
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc     15847 Nov 25 02:42 start_atlas.sh
[2025-11-25 14:34:31] -rw-r--r-- 2 boinc boinc    590099 Nov 25 02:42 input.tar.gz
[2025-11-25 14:34:31] -rw------- 1 boinc boinc 906671058 Nov 25 14:32 HITS.pool.root.1
[2025-11-25 14:34:31] -rw------- 1 boinc boinc   8304640 Nov 25 14:34 result.tar.gz
14:34:32 (1684323): run_atlas exited; CPU time 498207.415175
14:34:32 (1684323): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN