Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:01:37 (9584): wrapper (7.7.26015): starting
20:01:37 (9584): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 20:01:37] Arguments: --nthreads 12
[2025-11-23 20:01:37] Threads: 12
[2025-11-23 20:01:37] Checking for CVMFS
[2025-11-23 20:01:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 20:01:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 20:01:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 20:01:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 20:01:38] 2.11.2.0 25590 184796 90380 153227 3 81 13539417 20275201 1 130560 2 97527715 99.967 7347662 25500 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 20:01:38] CVMFS is ok
[2025-11-23 20:01:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 20:01:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 20:01:38] Further information can be found at the LHC@home message board.
[2025-11-23 20:01:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 20:01:38] Checking for apptainer binary...
[2025-11-23 20:01:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 20:01:38] Running /usr/bin/apptainer --version
[2025-11-23 20:01:38] apptainer version 1.3.2-1.el7
[2025-11-23 20:01:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 20:01:39] c-205-24.aglt2.org
[2025-11-23 20:01:39] apptainer works
[2025-11-23 20:01:39] Set ATHENA_PROC_NUMBER=12
[2025-11-23 20:01:39] Set ATHENA_CORE_NUMBER=12
[2025-11-23 20:01:39] Starting ATLAS job with PandaID=6895355082
[2025-11-23 20:01:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:06:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:06:42] 2025-11-24 08:05:50,093 | INFO     | time since job start (25436s) is within the limit (172800.0s)
[2025-11-24 03:06:42] 2025-11-24 08:05:51,098 | INFO     | monitor loop #1906: job 0:6895355082 is in state 'finished'
[2025-11-24 03:06:42] 2025-11-24 08:05:51,098 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:06:42] 2025-11-24 08:05:52,099 | INFO     | time since job start (25438s) is within the limit (172800.0s)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,085 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 03:06:42] 2025-11-24 08:05:53,089 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 03:06:42] 2025-11-24 08:05:53,091 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895355082/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,092 | INFO     | extracted standard info from prmon json
[2025-11-24 03:06:42] 2025-11-24 08:05:53,092 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:06:42] 2025-11-24 08:05:53,092 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:06:42] 2025-11-24 08:05:53,101 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:06:42] 2025-11-24 08:05:53,101 | INFO     | sum of square deviations: 22484468930.028786
[2025-11-24 03:06:42] 2025-11-24 08:05:53,105 | INFO     | sum of deviations: 350719432198.8418
[2025-11-24 03:06:42] 2025-11-24 08:05:53,105 | INFO     | mean x: 1763958832.258993
[2025-11-24 03:06:42] 2025-11-24 08:05:53,105 | INFO     | mean y: 3422948.242206235
[2025-11-24 03:06:42] 2025-11-24 08:05:53,105 | INFO     | intersect: -27511331436.095123
[2025-11-24 03:06:42] 2025-11-24 08:05:53,106 | INFO     | chi2: 6.022032075988174
[2025-11-24 03:06:42] 2025-11-24 08:05:53,107 | INFO     | sum of square deviations: 21685361304.689274
[2025-11-24 03:06:42] 2025-11-24 08:05:53,110 | INFO     | sum of deviations: 515361305676.14996
[2025-11-24 03:06:42] 2025-11-24 08:05:53,110 | INFO     | mean x: 1763958679.762136
[2025-11-24 03:06:42] 2025-11-24 08:05:53,111 | INFO     | mean y: 3454332.919902913
[2025-11-24 03:06:42] 2025-11-24 08:05:53,111 | INFO     | intersect: -41917730912.18884
[2025-11-24 03:06:42] 2025-11-24 08:05:53,111 | INFO     | chi2: 2.8109608512734696
[2025-11-24 03:06:42] 2025-11-24 08:05:53,111 | INFO     | current chi2=2.8109608512734696 (change=53.32205448586539 %)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,112 | INFO     | sum of square deviations: 20905416829.34147
[2025-11-24 03:06:42] 2025-11-24 08:05:53,115 | INFO     | sum of deviations: 555928895938.1326
[2025-11-24 03:06:42] 2025-11-24 08:05:53,116 | INFO     | mean x: 1763958527.2653563
[2025-11-24 03:06:42] 2025-11-24 08:05:53,116 | INFO     | mean y: 3462210.498771499
[2025-11-24 03:06:42] 2025-11-24 08:05:53,116 | INFO     | intersect: -46904739838.21275
[2025-11-24 03:06:42] 2025-11-24 08:05:53,116 | INFO     | chi2: 2.3517330305002964
[2025-11-24 03:06:42] 2025-11-24 08:05:53,116 | INFO     | current chi2=2.3517330305002964 (change=16.33704078678741 %)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,117 | INFO     | right removable region: 406
[2025-11-24 03:06:42] 2025-11-24 08:05:53,117 | INFO     | sum of square deviations: 21685295424.689274
[2025-11-24 03:06:42] 2025-11-24 08:05:53,121 | INFO     | sum of deviations: 221815013808.85413
[2025-11-24 03:06:42] 2025-11-24 08:05:53,121 | INFO     | mean x: 1763958984.762136
[2025-11-24 03:06:42] 2025-11-24 08:05:53,121 | INFO     | mean y: 3447456.5291262134
[2025-11-24 03:06:42] 2025-11-24 08:05:53,121 | INFO     | intersect: -18039773947.67602
[2025-11-24 03:06:42] 2025-11-24 08:05:53,122 | INFO     | chi2: 3.8247716424692824
[2025-11-24 03:06:42] 2025-11-24 08:05:53,122 | INFO     | current chi2=3.8247716424692824 (change=36.48702640226865 %)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,122 | INFO     | sum of square deviations: 20905310444.86976
[2025-11-24 03:06:42] 2025-11-24 08:05:53,126 | INFO     | sum of deviations: 191173886874.08362
[2025-11-24 03:06:42] 2025-11-24 08:05:53,126 | INFO     | mean x: 1763959137.2628992
[2025-11-24 03:06:42] 2025-11-24 08:05:53,126 | INFO     | mean y: 3453439.793611794
[2025-11-24 03:06:42] 2025-11-24 08:05:53,126 | INFO     | intersect: -16127516030.710443
[2025-11-24 03:06:42] 2025-11-24 08:05:53,127 | INFO     | chi2: 3.7779898671197785
[2025-11-24 03:06:42] 2025-11-24 08:05:53,127 | INFO     | current chi2=3.7779898671197785 (change=1.2231259725430683 %)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,127 | INFO     | left removable region: 20
[2025-11-24 03:06:42] 2025-11-24 08:05:53,128 | INFO     | sum of square deviations: 17833473265.937866
[2025-11-24 03:06:42] 2025-11-24 08:05:53,131 | INFO     | sum of deviations: 355590904139.7204
[2025-11-24 03:06:42] 2025-11-24 08:05:53,131 | INFO     | mean x: 1763959106.7720208
[2025-11-24 03:06:42] 2025-11-24 08:05:53,131 | INFO     | mean y: 3501982.4740932644
[2025-11-24 03:06:42] 2025-11-24 08:05:53,131 | INFO     | intersect: -35168996626.67833
[2025-11-24 03:06:42] 2025-11-24 08:05:53,132 | INFO     | chi2: 0.05344793552362116
[2025-11-24 03:06:42] 2025-11-24 08:05:53,132 | INFO     | current memory leak: 19.94 B/s (using 386 data points, chi2=0.05)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,132 | INFO     | could have reported an average CPU frequency of 2359 MHz (18 samples)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,132 | INFO     | ..............................
[2025-11-24 03:06:42] 2025-11-24 08:05:53,132 | INFO     | . Timing measurements:
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . get job = 0 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . initial setup = 2 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . payload setup = 7 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . stage-in = 0 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . payload execution = 25398 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . stage-out = 3 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | . log creation = 0 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,133 | INFO     | ..............................
[2025-11-24 03:06:42] 2025-11-24 08:05:53,217 | INFO     | 
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | job summary report
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | --------------------------------------------------
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | PanDA job id: 6895355082
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | task id: 47556137
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | errors: (none)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,218 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | pilot state: finished 
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | transexitcode: 0
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | exeerrorcode: 0
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | exeerrordiag: 
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | exitcode: 0
[2025-11-24 03:06:42] 2025-11-24 08:05:53,219 | INFO     | exitmsg: OK
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | cpuconsumptiontime: 291442 s
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | nevents: 1000
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | neventsw: 0
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | pid: 19828
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | pgrp: 19828
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | corecount: 12
[2025-11-24 03:06:42] 2025-11-24 08:05:53,220 | INFO     | event service: False
[2025-11-24 03:06:42] 2025-11-24 08:05:53,221 | INFO     | sizes: {0: 2298635, 1: 2298834, 6: 2299096, 11: 2299124, 25410: 2336221, 25414: 2345215, 25416: 2345427, 25422: 2345673}
[2025-11-24 03:06:42] 2025-11-24 08:05:53,221 | INFO     | --------------------------------------------------
[2025-11-24 03:06:42] 2025-11-24 08:05:53,221 | INFO     | 
[2025-11-24 03:06:42] 2025-11-24 08:05:53,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 03:06:42] 2025-11-24 08:05:53,244 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:06:42] 2025-11-24 08:05:53,248 | INFO     | job 6895355082 has completed (purged errors)
[2025-11-24 03:06:42] 2025-11-24 08:05:53,248 | INFO     | overall cleanup function is called
[2025-11-24 03:06:42] 2025-11-24 08:05:54,265 | INFO     | --- collectZombieJob: --- 10, [19828]
[2025-11-24 03:06:42] 2025-11-24 08:05:54,265 | INFO     | zombie collector waiting for pid 19828
[2025-11-24 03:06:42] 2025-11-24 08:05:54,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:06:42] 2025-11-24 08:05:54,266 | INFO     | collected zombie processes
[2025-11-24 03:06:42] 2025-11-24 08:05:54,266 | INFO     | will attempt to kill all subprocesses of pid=19828
[2025-11-24 03:06:42] 2025-11-24 08:05:54,356 | INFO     | process IDs to be killed: [19828] (in reverse order)
[2025-11-24 03:06:42] 2025-11-24 08:05:54,409 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:06:42] 2025-11-24 08:05:54,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:06:42] 2025-11-24 08:05:54,413 | INFO     | did not find any defunct processes belonging to 19828
[2025-11-24 03:06:42] 2025-11-24 08:05:54,416 | INFO     | did not find any defunct processes belonging to 19828
[2025-11-24 03:06:42] 2025-11-24 08:05:54,418 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:06:42] 2025-11-24 08:05:54,419 | INFO     | ready for new job
[2025-11-24 03:06:42] 2025-11-24 08:05:54,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:06:42] 2025-11-24 08:05:54,421 | INFO     | ***************************************
[2025-11-24 03:06:42] 2025-11-24 08:05:54,421 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:06:42] 2025-11-24 08:05:54,421 | INFO     | ***************************************
[2025-11-24 03:06:42] 2025-11-24 08:05:54,421 | INFO     | 
[2025-11-24 03:06:42] 2025-11-24 08:05:54,422 | INFO     | architecture information:
[2025-11-24 03:06:42] 2025-11-24 08:05:54,422 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:06:42] 2025-11-24 08:05:54,437 | INFO     | cat /etc/os-release:
[2025-11-24 03:06:42] NAME="CentOS Linux"
[2025-11-24 03:06:42] VERSION="7 (Core)"
[2025-11-24 03:06:42] ID="centos"
[2025-11-24 03:06:42] ID_LIKE="rhel fedora"
[2025-11-24 03:06:42] VERSION_ID="7"
[2025-11-24 03:06:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:06:42] ANSI_COLOR="0;31"
[2025-11-24 03:06:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:06:42] HOME_URL="https://www.centos.org/"
[2025-11-24 03:06:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:06:42] 
[2025-11-24 03:06:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:06:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:06:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:06:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:06:42] 
[2025-11-24 03:06:42] 2025-11-24 08:05:54,437 | INFO     | ***************************************
[2025-11-24 03:06:42] 2025-11-24 08:05:54,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 03:06:42] 2025-11-24 08:05:54,957 | INFO     | sufficient remaining disk space (28240248832 B)
[2025-11-24 03:06:42] 2025-11-24 08:05:54,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:06:42] 2025-11-24 08:05:54,958 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:06:42] 2025-11-24 08:05:54,958 | INFO     | update_server=False
[2025-11-24 03:06:42] 2025-11-24 08:05:54,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:06:42] 2025-11-24 08:05:54,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:06:42] 2025-11-24 08:05:54,958 | INFO     | aborting loop
[2025-11-24 03:06:42] 2025-11-24 08:05:54,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:06:42] 2025-11-24 08:05:55,039 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:06:42] 2025-11-24 08:05:55,132 | INFO     | all payload control threads have been joined
[2025-11-24 03:06:42] 2025-11-24 08:05:55,227 | INFO     | all job control threads have been joined
[2025-11-24 03:06:42] 2025-11-24 08:05:55,963 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:55,964 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:55,965 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:55,966 | INFO     | all data control threads have been joined
[2025-11-24 03:06:42] 2025-11-24 08:05:56,115 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,119 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,137 | INFO     | [payload] control thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,180 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,233 | INFO     | [job] control thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,296 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,836 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:56,972 | INFO     | [data] control thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:57,044 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:57,123 | INFO     | [job] validate thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:57,261 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:05:57,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:06:42] 2025-11-24 08:06:01,779 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:06:42] 2025-11-24 08:06:25,302 | INFO     | PID=13393 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:06:42] 2025-11-24 08:06:25,303 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:06:42] 2025-11-24 08:06:25,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:06:42] 2025-11-24 08:06:25,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:06:42] 2025-11-24 08:06:35,838 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:06:42] 2025-11-24 08:06:37,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140366517086016)>', '<ExcThread(monitor, started 140365554243328)>']
[2025-11-24 03:06:42] 2025-11-24 08:06:38,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:06:42] 2025-11-24 08:06:38,368 | INFO     | [monitor] control thread has ended
[2025-11-24 03:06:42] 2025-11-24 08:06:42,496 | INFO     | all workflow threads have been joined
[2025-11-24 03:06:42] 2025-11-24 08:06:42,496 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:06:42] 2025-11-24 08:06:42,496 | INFO     | traces error code: 0
[2025-11-24 03:06:42] 2025-11-24 08:06:42,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:06:42] 2025-11-24 08:06:42,608 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:06:42] 2025-11-24 08:06:42,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:06:42] 2025-11-24 08:06:42,617 [wrapper] pilotpid: 13393
[2025-11-24 03:06:42] 2025-11-24 08:06:42,621 [wrapper] Pilot exit status: 0
[2025-11-24 03:06:42] 2025-11-24 08:06:42,635 [wrapper] pandaids: 6895355082
[2025-11-24 03:06:42] 2025-11-24 08:06:42,683 [wrapper] cleanup supervisor_pilot  4327 13394
[2025-11-24 03:06:42] 2025-11-24 08:06:42,687 [wrapper] Test setup, not cleaning
[2025-11-24 03:06:42] 2025-11-24 08:06:42,691 [wrapper] apfmon messages muted
[2025-11-24 03:06:42] 2025-11-24 08:06:42,695 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:06:42] 2025-11-24 08:06:42,699 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:06:42]  *** Error codes and diagnostics ***
[2025-11-24 03:06:42]     "exeErrorCode": 0,
[2025-11-24 03:06:42]     "exeErrorDiag": "",
[2025-11-24 03:06:42]     "pilotErrorCode": 0,
[2025-11-24 03:06:42]     "pilotErrorDiag": "",
[2025-11-24 03:06:42]  *** Listing of results directory ***
[2025-11-24 03:06:42] total 1316220
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 00:47 pilot3.tar.gz
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 00:52 queuedata.json
[2025-11-24 03:06:42] -rwx------ 1 boincer umatlas     36292 Nov 23 00:52 runpilot2-wrapper.sh
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas       100 Nov 23 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:06:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 20:01 run_atlas
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas       105 Nov 23 20:01 job.xml
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas 411039303 Nov 23 20:01 EVNT.47483658._000641.pool.root.1
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 20:01 input.tar.gz
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 20:01 start_atlas.sh
[2025-11-24 03:06:42] drwxrwx--x 2 boincer umatlas      4096 Nov 23 20:01 shared
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas         0 Nov 23 20:01 boinc_lockfile
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas      2785 Nov 23 20:01 pandaJob.out
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas        57 Nov 23 20:01 setup.sh.local
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas    989786 Nov 23 20:01 agis_schedconf.cvmfs.json
[2025-11-24 03:06:42] drwx------ 5 boincer umatlas      4096 Nov 23 20:01 pilot3
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas       533 Nov 24 02:56 boinc_task_state.xml
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 03:04 init_data.xml
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas 921393186 Nov 24 03:05 HITS.47556137._006367.pool.root.1
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas      1061 Nov 24 03:05 memory_monitor_summary.json
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas   1526164 Nov 24 03:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas   2159013 Nov 24 03:05 log.47556137._006367.job.log.tgz.1
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas      8665 Nov 24 03:05 heartbeat.json
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas        95 Nov 24 03:06 pilot_heartbeat.json
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas        29 Nov 24 03:06 wrapper_checkpoint.txt
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 03:06 boinc_mmap_file
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas      4746 Nov 24 03:06 pilotlog.txt
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas   3562957 Nov 24 03:06 log.47556137._006367.job.log.1
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas       353 Nov 24 03:06 output.list
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas       620 Nov 24 03:06 runtime_log
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas   5744640 Nov 24 03:06 result.tar.gz
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas       670 Nov 24 03:06 TI5MDmnCIh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSSIKDmiu9fGm.diag
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 03:06 runtime_log.err
[2025-11-24 03:06:42] -rw-r--r-- 1 boincer umatlas     21324 Nov 24 03:06 stderr.txt
[2025-11-24 03:06:42] HITS file was successfully produced:
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas 921393186 Nov 24 03:05 shared/HITS.pool.root.1
[2025-11-24 03:06:42]  *** Contents of shared directory: ***
[2025-11-24 03:06:42] total 1307424
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas 411039303 Nov 23 20:01 ATLAS.root_0
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas    590099 Nov 23 20:01 input.tar.gz
[2025-11-24 03:06:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 20:01 start_atlas.sh
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas 921393186 Nov 24 03:05 HITS.pool.root.1
[2025-11-24 03:06:42] -rw------- 1 boincer umatlas   5744640 Nov 24 03:06 result.tar.gz
03:06:44 (9584): run_atlas exited; CPU time 284632.030723
03:06:44 (9584): called boinc_finish(0)

</stderr_txt>
]]>

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