Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:19:00 (592296): wrapper (7.7.26015): starting
02:19:00 (592296): wrapper: running run_atlas (--nthreads 3)
[2025-11-24 02:19:00] Arguments: --nthreads 3
[2025-11-24 02:19:00] Threads: 3
[2025-11-24 02:19:00] Checking for CVMFS
[2025-11-24 02:19:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:19:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:19:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:19:01] 2.9.2.0 154488 93 59008 153228 2 16 34933889 36864001 0 130560 0 1314672 100.000 2599 2390 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-24 02:19:01] CVMFS is ok
[2025-11-24 02:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:19:01] Further information can be found at the LHC@home message board.
[2025-11-24 02:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:19:01] Checking for apptainer binary...
[2025-11-24 02:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:19:01] Running /usr/bin/apptainer --version
[2025-11-24 02:19:01] apptainer version 1.4.1-1.1
[2025-11-24 02:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:19:01] thA335
[2025-11-24 02:19:01] apptainer works
[2025-11-24 02:19:01] Set ATHENA_PROC_NUMBER=3
[2025-11-24 02:19:01] Set ATHENA_CORE_NUMBER=3
[2025-11-24 02:19:01] Starting ATLAS job with PandaID=6895355092
[2025-11-24 02:19:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:23:15]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:23:15] 2025-11-24 01:22:19,300 | INFO     | 
[2025-11-24 02:23:15] 2025-11-24 01:22:19,301 | INFO     | architecture information:
[2025-11-24 02:23:15] 2025-11-24 01:22:19,301 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:23:15] 2025-11-24 01:22:19,311 | INFO     | cat /etc/os-release:
[2025-11-24 02:23:15] NAME="CentOS Linux"
[2025-11-24 02:23:15] VERSION="7 (Core)"
[2025-11-24 02:23:15] ID="centos"
[2025-11-24 02:23:15] ID_LIKE="rhel fedora"
[2025-11-24 02:23:15] VERSION_ID="7"
[2025-11-24 02:23:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:23:15] ANSI_COLOR="0;31"
[2025-11-24 02:23:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:23:15] HOME_URL="https://www.centos.org/"
[2025-11-24 02:23:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:23:15] 
[2025-11-24 02:23:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:23:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:23:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:23:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:23:15] 
[2025-11-24 02:23:15] 2025-11-24 01:22:19,311 | INFO     | ***************************************
[2025-11-24 02:23:15] 2025-11-24 01:22:19,815 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 02:23:15] 2025-11-24 01:22:19,829 | INFO     | sufficient remaining disk space (826689978368 B)
[2025-11-24 02:23:15] 2025-11-24 01:22:19,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:23:15] 2025-11-24 01:22:19,829 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:23:15] 2025-11-24 01:22:19,829 | INFO     | update_server=False
[2025-11-24 02:23:15] 2025-11-24 01:22:19,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:23:15] 2025-11-24 01:22:19,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:23:15] 2025-11-24 01:22:19,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:23:15] 2025-11-24 01:22:20,265 | INFO     | all data control threads have been joined
[2025-11-24 02:23:15] 2025-11-24 01:22:20,452 | INFO     | all job control threads have been joined
[2025-11-24 02:23:15] 2025-11-24 01:22:20,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:23:15] 2025-11-24 01:22:20,460 | INFO     | aborting loop
[2025-11-24 02:23:15] 2025-11-24 01:22:20,486 | INFO     | all payload control threads have been joined
[2025-11-24 02:23:15] 2025-11-24 01:22:20,835 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:20,836 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,039 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,271 | INFO     | [data] control thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,313 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,457 | INFO     | [job] control thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,466 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,476 | INFO     | [job] validate thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,491 | INFO     | [payload] control thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,519 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,557 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,606 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:21,835 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:22,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:23:15] 2025-11-24 01:22:22,259 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:22,420 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:26,176 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:23:15] 2025-11-24 01:22:50,095 | INFO     | PID=596022 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 02:23:15] 2025-11-24 01:22:50,095 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:23:15] 2025-11-24 01:22:50,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:23:15] 2025-11-24 01:22:50,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:23:15] 2025-11-24 01:23:09,175 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:23:15] 2025-11-24 01:23:10,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140589445629760)>', '<ExcThread(monitor, started 140588347279104)>']
[2025-11-24 02:23:15] 2025-11-24 01:23:10,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:23:15] 2025-11-24 01:23:10,201 | INFO     | [monitor] control thread has ended
[2025-11-24 02:23:15] 2025-11-24 01:23:15,039 | INFO     | all workflow threads have been joined
[2025-11-24 02:23:15] 2025-11-24 01:23:15,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:23:15] 2025-11-24 01:23:15,040 | INFO     | traces error code: 0
[2025-11-24 02:23:15] 2025-11-24 01:23:15,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:23:15] 2025-11-24 01:23:15,089 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:23:15] 2025-11-24 01:23:15,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:23:15] 2025-11-24 01:23:15,096 [wrapper] pilotpid: 596022
[2025-11-24 02:23:15] 2025-11-24 01:23:15,099 [wrapper] Pilot exit status: 0
[2025-11-24 02:23:15] 2025-11-24 01:23:15,106 [wrapper] pandaids: 6895355092
[2025-11-24 02:23:15] 2025-11-24 01:23:15,125 [wrapper] cleanup supervisor_pilot  596028 596023
[2025-11-24 02:23:15] 2025-11-24 01:23:15,128 [wrapper] Test setup, not cleaning
[2025-11-24 02:23:15] 2025-11-24 01:23:15,131 [wrapper] apfmon messages muted
[2025-11-24 02:23:15] 2025-11-24 01:23:15,133 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:23:15] 2025-11-24 01:23:15,136 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:23:15]  *** Error codes and diagnostics ***
[2025-11-24 02:23:15]     "exeErrorCode": 65,
[2025-11-24 02:23:15]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 02:23:15]     "pilotErrorCode": 1305,
[2025-11-24 02:23:15]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-24 02:23:15]  *** Listing of results directory ***
[2025-11-24 02:23:15] total 404560
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc    576529 Nov 23 06:47 pilot3.tar.gz
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      5112 Nov 23 06:49 queuedata.json
[2025-11-24 02:23:15] -rwx------ 1 boinc boinc     36292 Nov 23 06:51 runpilot2-wrapper.sh
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc       100 Nov 24 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:23:15] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 02:19 run_atlas
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc       105 Nov 24 02:19 job.xml
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc 410073660 Nov 24 02:19 EVNT.47483658._000642.pool.root.1
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc    590101 Nov 24 02:19 input.tar.gz
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc     15847 Nov 24 02:19 start_atlas.sh
[2025-11-24 02:23:15] drwxrwx--x 2 boinc boinc      4096 Nov 24 02:19 shared
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc         0 Nov 24 02:19 boinc_setup_complete
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      6195 Nov 24 02:19 init_data.xml
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc         0 Nov 24 02:19 boinc_lockfile
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      2785 Nov 24 02:19 pandaJob.out
[2025-11-24 02:23:15] -rw------- 1 boinc boinc    989786 Nov 24 02:19 agis_schedconf.cvmfs.json
[2025-11-24 02:23:15] -rw------- 1 boinc boinc   1526164 Nov 24 02:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:23:15] drwx------ 5 boinc boinc      4096 Nov 24 02:19 pilot3
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc       523 Nov 24 02:20 boinc_task_state.xml
[2025-11-24 02:23:15] -rw------- 1 boinc boinc       957 Nov 24 02:20 memory_monitor_summary.json
[2025-11-24 02:23:15] -rw------- 1 boinc boinc     55627 Nov 24 02:20 log.47556137._006377.job.log.tgz.1
[2025-11-24 02:23:15] -rw------- 1 boinc boinc        95 Nov 24 02:22 pilot_heartbeat.json
[2025-11-24 02:23:15] -rw------- 1 boinc boinc      8381 Nov 24 02:22 heartbeat.json
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      8192 Nov 24 02:22 boinc_mmap_file
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc        23 Nov 24 02:22 wrapper_checkpoint.txt
[2025-11-24 02:23:15] -rw------- 1 boinc boinc      4751 Nov 24 02:23 pilotlog.txt
[2025-11-24 02:23:15] -rw------- 1 boinc boinc     91571 Nov 24 02:23 log.47556137._006377.job.log.1
[2025-11-24 02:23:15] -rw------- 1 boinc boinc       186 Nov 24 02:23 output.list
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc       620 Nov 24 02:23 runtime_log
[2025-11-24 02:23:15] -rw------- 1 boinc boinc    163840 Nov 24 02:23 result.tar.gz
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      8744 Nov 24 02:23 runtime_log.err
[2025-11-24 02:23:15] -rw------- 1 boinc boinc       649 Nov 24 02:23 2lWMDmSBIh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGSIKDmSyKO7m.diag
[2025-11-24 02:23:15] -rw-r--r-- 1 boinc boinc      9398 Nov 24 02:23 stderr.txt
[2025-11-24 02:23:15] No HITS result produced
[2025-11-24 02:23:15]  *** Contents of shared directory: ***
[2025-11-24 02:23:15] total 401224
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc 410073660 Nov 24 02:19 ATLAS.root_0
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc    590101 Nov 24 02:19 input.tar.gz
[2025-11-24 02:23:15] -rw-r--r-- 2 boinc boinc     15847 Nov 24 02:19 start_atlas.sh
[2025-11-24 02:23:15] -rw------- 1 boinc boinc    163840 Nov 24 02:23 result.tar.gz
02:23:17 (592296): run_atlas exited; CPU time 29.914924
02:23:17 (592296): called boinc_finish(0)

</stderr_txt>
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