Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
12:35:02 (3154159): wrapper (7.7.26015): starting
12:35:02 (3154159): wrapper: running run_atlas (--nthreads 12)
[2025-11-25 12:35:02] Arguments: --nthreads 12
[2025-11-25 12:35:02] Threads: 12
[2025-11-25 12:35:02] Checking for CVMFS
[2025-11-25 12:35:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 12:35:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 12:35:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 12:35:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 12:35:10] 2.11.0.0 7129 6085 132928 153281 1 48 5037034 6144000 9114 130560 0 33469096 99.998 340040 233 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-11-25 12:35:10] CVMFS is ok
[2025-11-25 12:35:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 12:35:11] Checking for apptainer binary...
[2025-11-25 12:35:11] apptainer is not installed, using version from CVMFS
[2025-11-25 12:35:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 12:35:11] radiat0r
[2025-11-25 12:35:11] apptainer works
[2025-11-25 12:35:11] Set ATHENA_PROC_NUMBER=12
[2025-11-25 12:35:11] Set ATHENA_CORE_NUMBER=12
[2025-11-25 12:35:11] Starting ATLAS job with PandaID=6893876663
[2025-11-25 12:35:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/39 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 15:46:49]  *** The last 200 lines of the pilot log: ***
[2025-11-25 15:46:49] 2025-11-25 15:45:53,763 | INFO     | monitor loop #806: job 0:6893876663 is in state 'finished'
[2025-11-25 15:46:49] 2025-11-25 15:45:53,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 15:46:49] 2025-11-25 15:45:53,932 | INFO     | time since job start (11428s) is within the limit (172800.0s)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,483 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 15:46:49] 2025-11-25 15:45:54,534 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2809.0117226562506
[2025-11-25 15:46:49] 2025-11-25 15:45:54,574 | INFO     | using path: /var/lib/boinc/slots/39/PanDA_Pilot-6893876663/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,575 | INFO     | extracted standard info from prmon json
[2025-11-25 15:46:49] 2025-11-25 15:45:54,575 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 15:46:49] 2025-11-25 15:45:54,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 15:46:49] 2025-11-25 15:45:54,577 | INFO     | fitting pss+swap vs Time
[2025-11-25 15:46:49] 2025-11-25 15:45:54,577 | INFO     | sum of square deviations: 2027644172.5026758
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | sum of deviations: 76143768876.00536
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | mean x: 1764079828.8449197
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | mean y: 3417424.689839572
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | intersect: -66242765504.23991
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | chi2: 4.292149345474108
[2025-11-25 15:46:49] 2025-11-25 15:45:54,578 | INFO     | sum of square deviations: 1869343344.0659366
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | sum of deviations: 128900094905.31874
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | mean x: 1764079676.3626373
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | mean y: 3467847.2527472526
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | intersect: -121638197620.74022
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | chi2: 2.051810252823801
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | current chi2=2.051810252823801 (change=52.19620549813 %)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,579 | INFO     | sum of square deviations: 1719474364.745762
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | sum of deviations: 123073120850.50858
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | mean x: 1764079523.8644068
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | mean y: 3461917.937853107
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | intersect: -126262318416.95729
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | chi2: 2.048603305878427
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | current chi2=2.048603305878427 (change=0.15629841701787967 %)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | right removable region: 176
[2025-11-25 15:46:49] 2025-11-25 15:45:54,580 | INFO     | sum of square deviations: 1869280575.7857158
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | sum of deviations: 23036797057.142868
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | mean x: 1764079981.357143
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | mean y: 3468120.813186813
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | intersect: -21736849009.487686
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | chi2: 2.356025206428446
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | current chi2=2.356025206428446 (change=45.10849887101957 %)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,581 | INFO     | sum of square deviations: 1719415928.1807957
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | sum of deviations: 11670990528.97741
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | mean x: 1764080133.8531075
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | mean y: 3479658.768361582
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | intersect: -11970680983.293541
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | chi2: 2.321541461844163
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | current chi2=2.321541461844163 (change=1.4636407322890086 %)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | left removable region: 20
[2025-11-25 15:46:49] 2025-11-25 15:45:54,582 | INFO     | sum of square deviations: 1177173502.6859007
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | sum of deviations: 43487154181.2564
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | mean x: 1764080103.378205
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | mean y: 3549017.487179487
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | intersect: -65165114113.86787
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | chi2: 0.01439056964339529
[2025-11-25 15:46:49] 2025-11-25 15:45:54,583 | INFO     | current memory leak: 36.94 B/s (using 156 data points, chi2=0.01)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | could have reported an average CPU frequency of 2809 MHz (10 samples)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | ..............................
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . Timing measurements:
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . get job = 0 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . initial setup = 1 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . payload setup = 7 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . stage-in = 0 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . payload execution = 11392 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . stage-out = 2 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | . log creation = 0 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,584 | INFO     | ..............................
[2025-11-25 15:46:49] 2025-11-25 15:45:54,775 | INFO     | 
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | job summary report
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | --------------------------------------------------
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | PanDA job id: 6893876663
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | task id: 47523449
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | errors: (none)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | pilot state: finished 
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | transexitcode: 0
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | exeerrorcode: 0
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | exeerrordiag: 
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | exitcode: 0
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | exitmsg: OK
[2025-11-25 15:46:49] 2025-11-25 15:45:54,776 | INFO     | cpuconsumptiontime: 132578 s
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | nevents: 1000
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | neventsw: 0
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | pid: 3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | pgrp: 3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | corecount: 12
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | event service: False
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | sizes: {0: 2284265, 6: 2284527, 11: 2284555, 11403: 2314570, 11406: 2323566, 11407: 2323622, 11413: 2323996}
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | --------------------------------------------------
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | 
[2025-11-25 15:46:49] 2025-11-25 15:45:54,777 | INFO     | executing command: ls -lF /var/lib/boinc/slots/39
[2025-11-25 15:46:49] 2025-11-25 15:45:54,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | job 6893876663 has completed (purged errors)
[2025-11-25 15:46:49] 2025-11-25 15:45:54,800 | INFO     | overall cleanup function is called
[2025-11-25 15:46:49] 2025-11-25 15:45:55,817 | INFO     | --- collectZombieJob: --- 10, [3167374]
[2025-11-25 15:46:49] 2025-11-25 15:45:55,817 | INFO     | zombie collector waiting for pid 3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:55,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 15:46:49] 2025-11-25 15:45:55,818 | INFO     | collected zombie processes
[2025-11-25 15:46:49] 2025-11-25 15:45:55,818 | INFO     | will attempt to kill all subprocesses of pid=3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:56,323 | INFO     | process IDs to be killed: [3167374] (in reverse order)
[2025-11-25 15:46:49] 2025-11-25 15:45:56,540 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 15:46:49] 2025-11-25 15:45:56,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 15:46:49] 2025-11-25 15:45:56,561 | INFO     | did not find any defunct processes belonging to 3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:56,575 | INFO     | did not find any defunct processes belonging to 3167374
[2025-11-25 15:46:49] 2025-11-25 15:45:56,576 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 15:46:49] 2025-11-25 15:45:56,577 | INFO     | ready for new job
[2025-11-25 15:46:49] 2025-11-25 15:45:56,577 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 15:46:49] 2025-11-25 15:45:56,579 | INFO     | ***************************************
[2025-11-25 15:46:49] 2025-11-25 15:45:56,579 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 15:46:49] 2025-11-25 15:45:56,579 | INFO     | ***************************************
[2025-11-25 15:46:49] 2025-11-25 15:45:56,579 | INFO     | 
[2025-11-25 15:46:49] 2025-11-25 15:45:56,621 | INFO     | architecture information:
[2025-11-25 15:46:49] 2025-11-25 15:45:56,622 | INFO     | executing command: cat /etc/os-release
[2025-11-25 15:46:49] 2025-11-25 15:45:56,638 | INFO     | cat /etc/os-release:
[2025-11-25 15:46:49] NAME="CentOS Linux"
[2025-11-25 15:46:49] VERSION="7 (Core)"
[2025-11-25 15:46:49] ID="centos"
[2025-11-25 15:46:49] ID_LIKE="rhel fedora"
[2025-11-25 15:46:49] VERSION_ID="7"
[2025-11-25 15:46:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 15:46:49] ANSI_COLOR="0;31"
[2025-11-25 15:46:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 15:46:49] HOME_URL="https://www.centos.org/"
[2025-11-25 15:46:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 15:46:49] 
[2025-11-25 15:46:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 15:46:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 15:46:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 15:46:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 15:46:49] 
[2025-11-25 15:46:49] 2025-11-25 15:45:56,639 | INFO     | ***************************************
[2025-11-25 15:46:49] 2025-11-25 15:45:57,142 | INFO     | executing command: df -mP /var/lib/boinc/slots/39
[2025-11-25 15:46:49] 2025-11-25 15:45:57,163 | INFO     | sufficient remaining disk space (543781027840 B)
[2025-11-25 15:46:49] 2025-11-25 15:45:57,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 15:46:49] 2025-11-25 15:45:57,164 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 15:46:49] 2025-11-25 15:45:57,164 | INFO     | update_server=False
[2025-11-25 15:46:49] 2025-11-25 15:45:57,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 15:46:49] 2025-11-25 15:45:57,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:49] 2025-11-25 15:45:57,272 | INFO     | aborting loop
[2025-11-25 15:46:49] 2025-11-25 15:45:57,645 | INFO     | all data control threads have been joined
[2025-11-25 15:46:49] 2025-11-25 15:45:57,795 | INFO     | all payload control threads have been joined
[2025-11-25 15:46:49] 2025-11-25 15:45:58,169 | INFO     | [job] retrieve thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,185 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 15:46:49] 2025-11-25 15:45:58,277 | INFO     | [job] job monitor thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,301 | INFO     | all job control threads have been joined
[2025-11-25 15:46:49] 2025-11-25 15:45:58,351 | INFO     | [payload] failed_post thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,650 | INFO     | [data] control thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,801 | INFO     | [payload] control thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,850 | INFO     | [job] validate thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:58,854 | INFO     | [data] copytool_in thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,072 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,085 | INFO     | [payload] validate_post thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 15:46:49] 2025-11-25 15:45:59,165 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,306 | INFO     | [job] control thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,622 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:45:59,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 15:46:49] 2025-11-25 15:46:00,247 | INFO     | [data] copytool_out thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:46:00,654 | INFO     | [job] queue monitor thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:46:03,145 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 15:46:49] 2025-11-25 15:46:27,574 | INFO     | PID=3159229 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 15:46:49] 2025-11-25 15:46:27,575 | INFO     | .. there are 2 such processes running
[2025-11-25 15:46:49] 2025-11-25 15:46:27,575 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 15:46:49] 2025-11-25 15:46:27,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 15:46:49] 2025-11-25 15:46:27,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 15:46:49] 2025-11-25 15:46:43,965 | INFO     | [monitor] cgroup control has ended
[2025-11-25 15:46:49] 2025-11-25 15:46:44,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327999780672)>', '<ExcThread(monitor, started 140327436408576)>']
[2025-11-25 15:46:49] 2025-11-25 15:46:44,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 15:46:49] 2025-11-25 15:46:44,657 | INFO     | [monitor] control thread has ended
[2025-11-25 15:46:49] 2025-11-25 15:46:49,236 | INFO     | all workflow threads have been joined
[2025-11-25 15:46:49] 2025-11-25 15:46:49,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 15:46:49] 2025-11-25 15:46:49,237 | INFO     | traces error code: 0
[2025-11-25 15:46:49] 2025-11-25 15:46:49,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 15:46:49] 2025-11-25 15:46:49,358 [wrapper] ==== pilot stdout END ====
[2025-11-25 15:46:49] 2025-11-25 15:46:49,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 15:46:49] 2025-11-25 15:46:49,365 [wrapper] pilotpid: 3159229
[2025-11-25 15:46:49] 2025-11-25 15:46:49,368 [wrapper] Pilot exit status: 0
[2025-11-25 15:46:49] 2025-11-25 15:46:49,380 [wrapper] pandaids: 6893876663
[2025-11-25 15:46:49] 2025-11-25 15:46:49,508 [wrapper] cleanup supervisor_pilot 3237577 3159230
[2025-11-25 15:46:49] 2025-11-25 15:46:49,512 [wrapper] Test setup, not cleaning
[2025-11-25 15:46:49] 2025-11-25 15:46:49,515 [wrapper] apfmon messages muted
[2025-11-25 15:46:49] 2025-11-25 15:46:49,518 [wrapper] ==== wrapper stdout END ====
[2025-11-25 15:46:49] 2025-11-25 15:46:49,520 [wrapper] ==== wrapper stderr END ====
[2025-11-25 15:46:49]  *** Error codes and diagnostics ***
[2025-11-25 15:46:49]     "exeErrorCode": 0,
[2025-11-25 15:46:49]     "exeErrorDiag": "",
[2025-11-25 15:46:49]     "pilotErrorCode": 0,
[2025-11-25 15:46:49]     "pilotErrorDiag": "",
[2025-11-25 15:46:49]  *** Listing of results directory ***
[2025-11-25 15:46:49] total 1297440
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc    576529 Nov 20 17:21 pilot3.tar.gz
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc      5112 Nov 20 17:33 queuedata.json
[2025-11-25 15:46:49] -rwx------ 1 boinc boinc     36292 Nov 20 17:33 runpilot2-wrapper.sh
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc       100 Nov 25 12:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 15:46:49] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 12:35 run_atlas
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc       105 Nov 25 12:35 job.xml
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:35 start_atlas.sh
[2025-11-25 15:46:49] drwxrwx--x 2 boinc boinc      4096 Nov 25 12:35 shared
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc    590099 Nov 25 12:35 input.tar.gz
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc      9415 Nov 25 12:35 init_data.xml
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc 410363598 Nov 25 12:35 EVNT.47493127._000767.pool.root.1
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc         0 Nov 25 12:35 boinc_setup_complete
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc         0 Nov 25 12:35 boinc_lockfile
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc      2785 Nov 25 12:35 pandaJob.out
[2025-11-25 15:46:49] -rw------- 1 boinc boinc    991894 Nov 25 12:35 agis_schedconf.cvmfs.json
[2025-11-25 15:46:49] drwx------ 5 boinc boinc      4096 Nov 25 12:35 pilot3
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc       532 Nov 25 15:41 boinc_task_state.xml
[2025-11-25 15:46:49] -rw------- 1 boinc boinc 907226073 Nov 25 15:45 HITS.47523449._007667.pool.root.1
[2025-11-25 15:46:49] -rw------- 1 boinc boinc        95 Nov 25 15:45 pilot_heartbeat.json
[2025-11-25 15:46:49] -rw------- 1 boinc boinc      1036 Nov 25 15:45 memory_monitor_summary.json
[2025-11-25 15:46:49] -rw------- 1 boinc boinc   1516240 Nov 25 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 15:46:49] -rw------- 1 boinc boinc   1955331 Nov 25 15:45 log.47523449._007667.job.log.tgz.1
[2025-11-25 15:46:49] -rw------- 1 boinc boinc      8559 Nov 25 15:45 heartbeat.json
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc        29 Nov 25 15:46 wrapper_checkpoint.txt
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc      8192 Nov 25 15:46 boinc_mmap_file
[2025-11-25 15:46:49] -rw------- 1 boinc boinc      4825 Nov 25 15:46 pilotlog.txt
[2025-11-25 15:46:49] -rw------- 1 boinc boinc   1574962 Nov 25 15:46 log.47523449._007667.job.log.1
[2025-11-25 15:46:49] -rw------- 1 boinc boinc       353 Nov 25 15:46 output.list
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc       620 Nov 25 15:46 runtime_log
[2025-11-25 15:46:49] -rw------- 1 boinc boinc   3553280 Nov 25 15:46 result.tar.gz
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc      8789 Nov 25 15:46 runtime_log.err
[2025-11-25 15:46:49] -rw------- 1 boinc boinc       651 Nov 25 15:46 o3HODmoiNg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHvGKDmhnsqlm.diag
[2025-11-25 15:46:49] -rw-r--r-- 1 boinc boinc     21031 Nov 25 15:46 stderr.txt
[2025-11-25 15:46:49] HITS file was successfully produced:
[2025-11-25 15:46:49] -rw------- 1 boinc boinc 907226073 Nov 25 15:45 shared/HITS.pool.root.1
[2025-11-25 15:46:49]  *** Contents of shared directory: ***
[2025-11-25 15:46:49] total 1290788
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc     15847 Nov 25 12:35 start_atlas.sh
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc    590099 Nov 25 12:35 input.tar.gz
[2025-11-25 15:46:49] -rw-r--r-- 2 boinc boinc 410363598 Nov 25 12:35 ATLAS.root_0
[2025-11-25 15:46:49] -rw------- 1 boinc boinc 907226073 Nov 25 15:45 HITS.pool.root.1
[2025-11-25 15:46:49] -rw------- 1 boinc boinc   3553280 Nov 25 15:46 result.tar.gz
15:46:51 (3154159): run_atlas exited; CPU time 132711.420954
15:46:51 (3154159): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN