Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:38 (2676): wrapper (7.7.26015): starting
20:03:38 (2676): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 20:03:38] Arguments: --nthreads 12
[2025-11-23 20:03:38] Threads: 12
[2025-11-23 20:03:38] Checking for CVMFS
[2025-11-23 20:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 20:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 20:03:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 20:03:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 20:03:39] 2.11.2.0 28623 276741 93500 153227 2 81 13129692 20275201 1 130560 4 126404921 99.971 15220373 13499 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 20:03:39] CVMFS is ok
[2025-11-23 20:03:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 20:03:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 20:03:39] Further information can be found at the LHC@home message board.
[2025-11-23 20:03:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 20:03:39] Checking for apptainer binary...
[2025-11-23 20:03:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 20:03:39] Running /usr/bin/apptainer --version
[2025-11-23 20:03:39] apptainer version 1.3.2-1.el7
[2025-11-23 20:03:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 20:03:40] c-205-20.aglt2.org
[2025-11-23 20:03:40] apptainer works
[2025-11-23 20:03:40] Set ATHENA_PROC_NUMBER=12
[2025-11-23 20:03:40] Set ATHENA_CORE_NUMBER=12
[2025-11-23 20:03:40] Starting ATLAS job with PandaID=6895346059
[2025-11-23 20:03:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:06:02]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:06:02] 2025-11-24 08:05:29,433 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 03:06:02] 2025-11-24 08:05:29,439 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1828.9166666666667
[2025-11-24 03:06:02] 2025-11-24 08:05:29,441 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346059/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,442 | INFO     | extracted standard info from prmon json
[2025-11-24 03:06:02] 2025-11-24 08:05:29,442 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:06:02] 2025-11-24 08:05:29,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:06:02] 2025-11-24 08:05:29,450 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:06:02] 2025-11-24 08:05:29,450 | INFO     | sum of square deviations: 22002919393.635193
[2025-11-24 03:06:02] 2025-11-24 08:05:29,454 | INFO     | sum of deviations: 422631802065.5194
[2025-11-24 03:06:02] 2025-11-24 08:05:29,454 | INFO     | mean x: 1763958860.7077296
[2025-11-24 03:06:02] 2025-11-24 08:05:29,454 | INFO     | mean y: 3423944.243961353
[2025-11-24 03:06:02] 2025-11-24 08:05:29,455 | INFO     | intersect: -33878675914.104897
[2025-11-24 03:06:02] 2025-11-24 08:05:29,455 | INFO     | chi2: 5.322209107960748
[2025-11-24 03:06:02] 2025-11-24 08:05:29,456 | INFO     | sum of square deviations: 21215330855.91668
[2025-11-24 03:06:02] 2025-11-24 08:05:29,459 | INFO     | sum of deviations: 566754189431.836
[2025-11-24 03:06:02] 2025-11-24 08:05:29,460 | INFO     | mean x: 1763958708.210269
[2025-11-24 03:06:02] 2025-11-24 08:05:29,460 | INFO     | mean y: 3451815.9437652812
[2025-11-24 03:06:02] 2025-11-24 08:05:29,460 | INFO     | intersect: -47119593054.41835
[2025-11-24 03:06:02] 2025-11-24 08:05:29,460 | INFO     | chi2: 2.74832231412431
[2025-11-24 03:06:02] 2025-11-24 08:05:29,461 | INFO     | current chi2=2.74832231412431 (change=48.36124890295123 %)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,461 | INFO     | sum of square deviations: 20446741103.116405
[2025-11-24 03:06:02] 2025-11-24 08:05:29,465 | INFO     | sum of deviations: 574743158016.0035
[2025-11-24 03:06:02] 2025-11-24 08:05:29,465 | INFO     | mean x: 1763958555.710396
[2025-11-24 03:06:02] 2025-11-24 08:05:29,465 | INFO     | mean y: 3453367.547029703
[2025-11-24 03:06:02] 2025-11-24 08:05:29,465 | INFO     | intersect: -49580150484.30685
[2025-11-24 03:06:02] 2025-11-24 08:05:29,465 | INFO     | chi2: 2.609195634086309
[2025-11-24 03:06:02] 2025-11-24 08:05:29,466 | INFO     | current chi2=2.609195634086309 (change=5.062240310133735 %)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,466 | INFO     | right removable region: 403
[2025-11-24 03:06:02] 2025-11-24 08:05:29,466 | INFO     | sum of square deviations: 21215278395.916687
[2025-11-24 03:06:02] 2025-11-24 08:05:29,470 | INFO     | sum of deviations: 280629306752.6011
[2025-11-24 03:06:02] 2025-11-24 08:05:29,470 | INFO     | mean x: 1763959013.210269
[2025-11-24 03:06:02] 2025-11-24 08:05:29,470 | INFO     | mean y: 3451360.7139364304
[2025-11-24 03:06:02] 2025-11-24 08:05:29,470 | INFO     | intersect: -23329666677.109055
[2025-11-24 03:06:02] 2025-11-24 08:05:29,471 | INFO     | chi2: 2.873831952735865
[2025-11-24 03:06:02] 2025-11-24 08:05:29,471 | INFO     | current chi2=2.873831952735865 (change=46.0030244126015 %)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,471 | INFO     | sum of square deviations: 20446661010.69312
[2025-11-24 03:06:02] 2025-11-24 08:05:29,475 | INFO     | sum of deviations: 249179197986.5048
[2025-11-24 03:06:02] 2025-11-24 08:05:29,475 | INFO     | mean x: 1763959165.7128713
[2025-11-24 03:06:02] 2025-11-24 08:05:29,475 | INFO     | mean y: 3457593.3836633665
[2025-11-24 03:06:02] 2025-11-24 08:05:29,476 | INFO     | intersect: -21493545265.09809
[2025-11-24 03:06:02] 2025-11-24 08:05:29,476 | INFO     | chi2: 2.8278876667243718
[2025-11-24 03:06:02] 2025-11-24 08:05:29,476 | INFO     | current chi2=2.8278876667243718 (change=1.5987116424032572 %)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,476 | INFO     | left removable region: 20
[2025-11-24 03:06:02] 2025-11-24 08:05:29,477 | INFO     | sum of square deviations: 17421098155.869358
[2025-11-24 03:06:02] 2025-11-24 08:05:29,480 | INFO     | sum of deviations: 358400616318.9871
[2025-11-24 03:06:02] 2025-11-24 08:05:29,480 | INFO     | mean x: 1763959135.2114882
[2025-11-24 03:06:02] 2025-11-24 08:05:29,480 | INFO     | mean y: 3497122.321148825
[2025-11-24 03:06:02] 2025-11-24 08:05:29,481 | INFO     | intersect: -36286066001.93623
[2025-11-24 03:06:02] 2025-11-24 08:05:29,481 | INFO     | chi2: 0.06792440999446318
[2025-11-24 03:06:02] 2025-11-24 08:05:29,481 | INFO     | current memory leak: 20.57 B/s (using 383 data points, chi2=0.07)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,482 | INFO     | could have reported an average CPU frequency of 2420 MHz (17 samples)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,482 | INFO     | ..............................
[2025-11-24 03:06:02] 2025-11-24 08:05:29,482 | INFO     | . Timing measurements:
[2025-11-24 03:06:02] 2025-11-24 08:05:29,482 | INFO     | . get job = 0 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . initial setup = 2 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . payload setup = 7 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . stage-in = 0 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . payload execution = 25255 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . stage-out = 3 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,483 | INFO     | . log creation = 0 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,484 | INFO     | ..............................
[2025-11-24 03:06:02] 2025-11-24 08:05:29,674 | INFO     | PID=6414 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,685 | INFO     | 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,685 | INFO     | job summary report
[2025-11-24 03:06:02] 2025-11-24 08:05:29,685 | INFO     | --------------------------------------------------
[2025-11-24 03:06:02] 2025-11-24 08:05:29,685 | INFO     | PanDA job id: 6895346059
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | task id: 47556149
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | errors: (none)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | pilot state: finished 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | transexitcode: 0
[2025-11-24 03:06:02] 2025-11-24 08:05:29,686 | INFO     | exeerrorcode: 0
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | exeerrordiag: 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | exitcode: 0
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | exitmsg: OK
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | cpuconsumptiontime: 290674 s
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | nevents: 1000
[2025-11-24 03:06:02] 2025-11-24 08:05:29,687 | INFO     | neventsw: 0
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | pid: 13825
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | pgrp: 13825
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | corecount: 12
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | event service: False
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | sizes: {0: 2298753, 5: 2299015, 11: 2299071, 25266: 2336051, 25269: 2345045, 25272: 2345101, 25278: 2345539}
[2025-11-24 03:06:02] 2025-11-24 08:05:29,688 | INFO     | --------------------------------------------------
[2025-11-24 03:06:02] 2025-11-24 08:05:29,689 | INFO     | 
[2025-11-24 03:06:02] 2025-11-24 08:05:29,689 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 03:06:02] 2025-11-24 08:05:29,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,755 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,756 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:06:02] 2025-11-24 08:05:29,757 | INFO     | job 6895346059 has completed (purged errors)
[2025-11-24 03:06:02] 2025-11-24 08:05:29,757 | INFO     | overall cleanup function is called
[2025-11-24 03:06:02] 2025-11-24 08:05:30,774 | INFO     | --- collectZombieJob: --- 10, [13825]
[2025-11-24 03:06:02] 2025-11-24 08:05:30,774 | INFO     | zombie collector waiting for pid 13825
[2025-11-24 03:06:02] 2025-11-24 08:05:30,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:06:02] 2025-11-24 08:05:30,774 | INFO     | collected zombie processes
[2025-11-24 03:06:02] 2025-11-24 08:05:30,774 | INFO     | will attempt to kill all subprocesses of pid=13825
[2025-11-24 03:06:02] 2025-11-24 08:05:30,865 | INFO     | process IDs to be killed: [13825] (in reverse order)
[2025-11-24 03:06:02] 2025-11-24 08:05:30,917 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:06:02] 2025-11-24 08:05:30,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:06:02] 2025-11-24 08:05:30,920 | INFO     | did not find any defunct processes belonging to 13825
[2025-11-24 03:06:02] 2025-11-24 08:05:30,922 | INFO     | did not find any defunct processes belonging to 13825
[2025-11-24 03:06:02] 2025-11-24 08:05:30,924 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:06:02] 2025-11-24 08:05:30,925 | INFO     | ready for new job
[2025-11-24 03:06:02] 2025-11-24 08:05:30,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:06:02] 2025-11-24 08:05:30,927 | INFO     | ***************************************
[2025-11-24 03:06:02] 2025-11-24 08:05:30,927 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:06:02] 2025-11-24 08:05:30,927 | INFO     | ***************************************
[2025-11-24 03:06:02] 2025-11-24 08:05:30,928 | INFO     | 
[2025-11-24 03:06:02] 2025-11-24 08:05:30,928 | INFO     | architecture information:
[2025-11-24 03:06:02] 2025-11-24 08:05:30,929 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:06:02] 2025-11-24 08:05:30,944 | INFO     | cat /etc/os-release:
[2025-11-24 03:06:02] NAME="CentOS Linux"
[2025-11-24 03:06:02] VERSION="7 (Core)"
[2025-11-24 03:06:02] ID="centos"
[2025-11-24 03:06:02] ID_LIKE="rhel fedora"
[2025-11-24 03:06:02] VERSION_ID="7"
[2025-11-24 03:06:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:06:02] ANSI_COLOR="0;31"
[2025-11-24 03:06:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:06:02] HOME_URL="https://www.centos.org/"
[2025-11-24 03:06:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:06:02] 
[2025-11-24 03:06:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:06:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:06:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:06:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:06:02] 
[2025-11-24 03:06:02] 2025-11-24 08:05:30,944 | INFO     | ***************************************
[2025-11-24 03:06:02] 2025-11-24 08:05:31,445 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 03:06:02] 2025-11-24 08:05:31,461 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-24 03:06:02] 2025-11-24 08:05:31,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:06:02] 2025-11-24 08:05:31,462 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:06:02] 2025-11-24 08:05:31,462 | INFO     | update_server=False
[2025-11-24 03:06:02] 2025-11-24 08:05:31,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:06:02] 2025-11-24 08:05:31,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:06:02] 2025-11-24 08:05:31,671 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 03:06:02] 2025-11-24 08:05:31,671 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 03:06:02] 2025-11-24 08:05:31,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:06:02] 2025-11-24 08:05:31,671 | INFO     | will abort loop
[2025-11-24 03:06:02] 2025-11-24 08:05:31,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:06:02] 2025-11-24 08:05:31,966 | INFO     | all data control threads have been joined
[2025-11-24 03:06:02] 2025-11-24 08:05:32,468 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:32,468 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:32,592 | INFO     | all payload control threads have been joined
[2025-11-24 03:06:02] 2025-11-24 08:05:32,645 | INFO     | all job control threads have been joined
[2025-11-24 03:06:02] 2025-11-24 08:05:32,677 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:32,781 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:32,971 | INFO     | [data] control thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,075 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,214 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,328 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,494 | INFO     | [job] validate thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,597 | INFO     | [payload] control thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,650 | INFO     | [job] control thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,909 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:33,918 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:34,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:06:02] 2025-11-24 08:05:36,598 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:06:02] 2025-11-24 08:05:38,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:41,806 | INFO     | job.realtimelogging is not enabled
[2025-11-24 03:06:02] 2025-11-24 08:05:42,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:06:02] 2025-11-24 08:05:43,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139623639779136)>', '<ExcThread(monitor, started 139623053379328)>']
[2025-11-24 03:06:02] 2025-11-24 08:05:48,956 | INFO     | all workflow threads have been joined
[2025-11-24 03:06:02] 2025-11-24 08:05:48,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:06:02] 2025-11-24 08:05:48,960 | INFO     | traces error code: 0
[2025-11-24 03:06:02] 2025-11-24 08:05:48,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:06:02] 2025-11-24 08:06:01,875 | INFO     | PID=6414 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 03:06:02] 2025-11-24 08:06:01,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:06:02] 2025-11-24 08:06:01,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:06:02] 2025-11-24 08:06:01,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:06:02] 2025-11-24 08:06:01,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:06:02] 2025-11-24 08:06:01,876 | INFO     | [monitor] control thread has ended
[2025-11-24 03:06:02] 2025-11-24 08:06:01,970 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:06:02] 2025-11-24 08:06:01,974 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:06:02] 2025-11-24 08:06:01,977 [wrapper] pilotpid: 6414
[2025-11-24 03:06:02] 2025-11-24 08:06:01,981 [wrapper] Pilot exit status: 0
[2025-11-24 03:06:02] 2025-11-24 08:06:01,995 [wrapper] pandaids: 6895346059
[2025-11-24 03:06:02] 2025-11-24 08:06:02,034 [wrapper] cleanup supervisor_pilot 16562 6415
[2025-11-24 03:06:02] 2025-11-24 08:06:02,039 [wrapper] Test setup, not cleaning
[2025-11-24 03:06:02] 2025-11-24 08:06:02,043 [wrapper] apfmon messages muted
[2025-11-24 03:06:02] 2025-11-24 08:06:02,046 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:06:02] 2025-11-24 08:06:02,050 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:06:02]  *** Error codes and diagnostics ***
[2025-11-24 03:06:02]     "exeErrorCode": 0,
[2025-11-24 03:06:02]     "exeErrorDiag": "",
[2025-11-24 03:06:02]     "pilotErrorCode": 0,
[2025-11-24 03:06:02]     "pilotErrorDiag": "",
[2025-11-24 03:06:02]  *** Listing of results directory ***
[2025-11-24 03:06:02] total 1307256
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 12:43 pilot3.tar.gz
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 12:49 queuedata.json
[2025-11-24 03:06:02] -rwx------ 1 boincer umatlas     36292 Nov 22 12:49 runpilot2-wrapper.sh
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas       100 Nov 23 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:06:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 20:03 run_atlas
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas       105 Nov 23 20:03 job.xml
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas 408858195 Nov 23 20:03 EVNT.47483658._001105.pool.root.1
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 20:03 start_atlas.sh
[2025-11-24 03:06:02] drwxrwx--x 2 boincer umatlas      4096 Nov 23 20:03 shared
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 20:03 input.tar.gz
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas         0 Nov 23 20:03 boinc_lockfile
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas      2783 Nov 23 20:03 pandaJob.out
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas        57 Nov 23 20:03 setup.sh.local
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas    989786 Nov 23 20:03 agis_schedconf.cvmfs.json
[2025-11-24 03:06:02] drwx------ 5 boincer umatlas      4096 Nov 23 20:03 pilot3
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas       532 Nov 24 02:56 boinc_task_state.xml
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 03:00 init_data.xml
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas 914444645 Nov 24 03:04 HITS.47556149._000917.pool.root.1
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas      1064 Nov 24 03:05 memory_monitor_summary.json
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas   1526164 Nov 24 03:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas   2168784 Nov 24 03:05 log.47556149._000917.job.log.tgz.1
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas      8677 Nov 24 03:05 heartbeat.json
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 03:05 boinc_mmap_file
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas        29 Nov 24 03:05 wrapper_checkpoint.txt
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas        95 Nov 24 03:06 pilot_heartbeat.json
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas       744 Nov 24 03:06 pilotlog.txt
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas   3534498 Nov 24 03:06 log.47556149._000917.job.log.1
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas       353 Nov 24 03:06 output.list
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas       620 Nov 24 03:06 runtime_log
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas   5724160 Nov 24 03:06 result.tar.gz
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas       670 Nov 24 03:06 WKRKDmpu6g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAKKKDmXI8Agm.diag
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 03:06 runtime_log.err
[2025-11-24 03:06:02] -rw-r--r-- 1 boincer umatlas     21358 Nov 24 03:06 stderr.txt
[2025-11-24 03:06:02] HITS file was successfully produced:
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas 914444645 Nov 24 03:04 shared/HITS.pool.root.1
[2025-11-24 03:06:02]  *** Contents of shared directory: ***
[2025-11-24 03:06:02] total 1298484
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas 408858195 Nov 23 20:03 ATLAS.root_0
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 20:03 start_atlas.sh
[2025-11-24 03:06:02] -rw-r--r-- 2 boincer umatlas    590102 Nov 23 20:03 input.tar.gz
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas 914444645 Nov 24 03:04 HITS.pool.root.1
[2025-11-24 03:06:02] -rw------- 1 boincer umatlas   5724160 Nov 24 03:06 result.tar.gz
03:06:03 (2676): run_atlas exited; CPU time 284100.207652
03:06:03 (2676): called boinc_finish(0)

</stderr_txt>
]]>

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