Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:06:42 (3237113): wrapper (7.7.26015): starting
21:06:42 (3237113): wrapper: running run_atlas (--nthreads 2)
[2025-11-26 21:06:42] Arguments: --nthreads 2
[2025-11-26 21:06:42] Threads: 2
[2025-11-26 21:06:42] Checking for CVMFS
[2025-11-26 21:06:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:06:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:06:42] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:06:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:06:43] 2.9.2.0 1870856 11661 61536 153333 0 81 21247700 36864001 0 130560 0 3764295 99.853 677806 4651 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 21:06:43] CVMFS is ok
[2025-11-26 21:06:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:06:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:06:43] Further information can be found at the LHC@home message board.
[2025-11-26 21:06:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:06:43] Checking for apptainer binary...
[2025-11-26 21:06:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:06:43] Running /usr/bin/apptainer --version
[2025-11-26 21:06:43] apptainer version 1.4.1-1.1
[2025-11-26 21:06:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:06:43] magicA244
[2025-11-26 21:06:43] apptainer works
[2025-11-26 21:06:43] Set ATHENA_PROC_NUMBER=2
[2025-11-26 21:06:43] Set ATHENA_CORE_NUMBER=2
[2025-11-26 21:06:43] Starting ATLAS job with PandaID=6895324660
[2025-11-26 21:06:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:24:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:24:04] 2025-11-27 08:23:05,557 | INFO     | all job control threads have been joined
[2025-11-27 09:24:04] 2025-11-27 08:23:05,806 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:05,905 | INFO     | [payload] control thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,012 | INFO     | [data] control thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,088 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,306 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,330 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,563 | INFO     | [job] control thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,666 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,702 | INFO     | [job] validate thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,806 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:06,930 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:07,130 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:07,379 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:07,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:24:04] 2025-11-27 08:23:08,742 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:08,807 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:24:04] 2025-11-27 08:23:35,322 | INFO     | PID=3240824 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:24:04] 2025-11-27 08:23:35,322 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:24:04] 2025-11-27 08:23:35,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:24:04] 2025-11-27 08:23:35,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:24:04] 2025-11-27 08:23:59,195 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:24:04] 2025-11-27 08:23:59,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242208716608)>', '<ExcThread(monitor, started 140241713211136)>']
[2025-11-27 09:24:04] 2025-11-27 08:23:59,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:24:04] 2025-11-27 08:23:59,451 | INFO     | [monitor] control thread has ended
[2025-11-27 09:24:04] 2025-11-27 08:24:04,244 | INFO     | all workflow threads have been joined
[2025-11-27 09:24:04] 2025-11-27 08:24:04,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:24:04] 2025-11-27 08:24:04,246 | INFO     | traces error code: 0
[2025-11-27 09:24:04] 2025-11-27 08:24:04,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:24:04] 2025-11-27 08:24:04,290 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:24:04] 2025-11-27 08:24:04,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:24:04] 2025-11-27 08:24:04,294 [wrapper] pilotpid: 3240824
[2025-11-27 09:24:04] 2025-11-27 08:24:04,296 [wrapper] Pilot exit status: 0
[2025-11-27 09:24:04] 2025-11-27 08:24:04,302 [wrapper] pandaids: 6895324660
[2025-11-27 09:24:04] 2025-11-27 08:24:04,315 [wrapper] cleanup supervisor_pilot 3320025 3240825
[2025-11-27 09:24:04] 2025-11-27 08:24:04,317 [wrapper] Test setup, not cleaning
[2025-11-27 09:24:04] 2025-11-27 08:24:04,319 [wrapper] apfmon messages muted
[2025-11-27 09:24:04] 2025-11-27 08:24:04,321 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:24:04] 2025-11-27 08:24:04,323 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:24:04]  *** Error codes and diagnostics ***
[2025-11-27 09:24:04]     "exeErrorCode": 0,
[2025-11-27 09:24:04]     "exeErrorDiag": "",
[2025-11-27 09:24:04]     "pilotErrorCode": 0,
[2025-11-27 09:24:04]     "pilotErrorDiag": "",
[2025-11-27 09:24:04]  *** Listing of results directory ***
[2025-11-27 09:24:04] total 1309472
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      5112 Nov 21 15:24 queuedata.json
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc    576529 Nov 21 15:24 pilot3.tar.gz
[2025-11-27 09:24:04] -rwx------ 1 boinc boinc     36292 Nov 21 15:25 runpilot2-wrapper.sh
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc       100 Nov 26 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:24:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 21:06 run_atlas
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc       105 Nov 26 21:06 job.xml
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc 406561206 Nov 26 21:06 EVNT.47483658._000027.pool.root.1
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc    590103 Nov 26 21:06 input.tar.gz
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:06 start_atlas.sh
[2025-11-27 09:24:04] drwxrwx--x 2 boinc boinc      4096 Nov 26 21:06 shared
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc         0 Nov 26 21:06 boinc_setup_complete
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      6210 Nov 26 21:06 init_data.xml
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc         0 Nov 26 21:06 boinc_lockfile
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      2781 Nov 26 21:06 pandaJob.out
[2025-11-27 09:24:04] -rw------- 1 boinc boinc    991522 Nov 26 21:06 agis_schedconf.cvmfs.json
[2025-11-27 09:24:04] drwx------ 5 boinc boinc      4096 Nov 26 21:06 pilot3
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc       531 Nov 27 09:18 boinc_task_state.xml
[2025-11-27 09:24:04] -rw------- 1 boinc boinc 915608023 Nov 27 09:22 HITS.47556137._000261.pool.root.1
[2025-11-27 09:24:04] -rw------- 1 boinc boinc        95 Nov 27 09:22 pilot_heartbeat.json
[2025-11-27 09:24:04] -rw------- 1 boinc boinc      1022 Nov 27 09:22 memory_monitor_summary.json
[2025-11-27 09:24:04] -rw------- 1 boinc boinc   1516240 Nov 27 09:22 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:24:04] -rw------- 1 boinc boinc   1213525 Nov 27 09:22 log.47556137._000261.job.log.tgz.1
[2025-11-27 09:24:04] -rw------- 1 boinc boinc      8555 Nov 27 09:23 heartbeat.json
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc        28 Nov 27 09:23 wrapper_checkpoint.txt
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      8192 Nov 27 09:23 boinc_mmap_file
[2025-11-27 09:24:04] -rw------- 1 boinc boinc      4752 Nov 27 09:24 pilotlog.txt
[2025-11-27 09:24:04] -rw------- 1 boinc boinc   6197638 Nov 27 09:24 log.47556137._000261.job.log.1
[2025-11-27 09:24:04] -rw------- 1 boinc boinc       353 Nov 27 09:24 output.list
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc       620 Nov 27 09:24 runtime_log
[2025-11-27 09:24:04] -rw------- 1 boinc boinc   7434240 Nov 27 09:24 result.tar.gz
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      8913 Nov 27 09:24 runtime_log.err
[2025-11-27 09:24:04] -rw------- 1 boinc boinc       668 Nov 27 09:24 qaqNDmDGhg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgfHKDmCJQV4n.diag
[2025-11-27 09:24:04] -rw-r--r-- 1 boinc boinc      6532 Nov 27 09:24 stderr.txt
[2025-11-27 09:24:04] HITS file was successfully produced:
[2025-11-27 09:24:04] -rw------- 1 boinc boinc 915608023 Nov 27 09:22 shared/HITS.pool.root.1
[2025-11-27 09:24:04]  *** Contents of shared directory: ***
[2025-11-27 09:24:04] total 1299048
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc 406561206 Nov 26 21:06 ATLAS.root_0
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc    590103 Nov 26 21:06 input.tar.gz
[2025-11-27 09:24:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 21:06 start_atlas.sh
[2025-11-27 09:24:04] -rw------- 1 boinc boinc 915608023 Nov 27 09:22 HITS.pool.root.1
[2025-11-27 09:24:04] -rw------- 1 boinc boinc   7434240 Nov 27 09:24 result.tar.gz
09:24:05 (3237113): run_atlas exited; CPU time 87539.647865
09:24:05 (3237113): called boinc_finish(0)

</stderr_txt>
]]>

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