Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:45:46 (1252239): wrapper (7.7.26015): starting
02:45:46 (1252239): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 02:45:46] Arguments: --nthreads 12
[2025-11-24 02:45:46] Threads: 12
[2025-11-24 02:45:46] Checking for CVMFS
[2025-11-24 02:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:45:46] 2.13.3.0 8990 3535 75316 153228 0 81 3433906 4097025 1044 130560 0 2747732 99.990 130325 8575 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-24 02:45:46] CVMFS is ok
[2025-11-24 02:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:45:46] Further information can be found at the LHC@home message board.
[2025-11-24 02:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:45:46] Checking for apptainer binary...
[2025-11-24 02:45:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-24 02:45:46] apptainer is not installed, using version from CVMFS
[2025-11-24 02:45:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:45:46] pckelar2.cern.ch
[2025-11-24 02:45:46] apptainer works
[2025-11-24 02:45:46] Set ATHENA_PROC_NUMBER=12
[2025-11-24 02:45:46] Set ATHENA_CORE_NUMBER=12
[2025-11-24 02:45:46] Starting ATLAS job with PandaID=6895364641
[2025-11-24 02:45:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:13:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:13:18] 2025-11-24 14:12:36,667 | INFO     | monitor loop #3306: job 0:6895364641 is in state 'finished'
[2025-11-24 15:13:18] 2025-11-24 14:12:36,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:13:18] 2025-11-24 14:12:37,666 | INFO     | time since job start (44800s) is within the limit (172800.0s)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,065 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 15:13:18] 2025-11-24 14:12:38,070 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2832.3908749999996
[2025-11-24 15:13:18] 2025-11-24 14:12:38,075 | INFO     | using path: /var/lib/boinc/slots/25/PanDA_Pilot-6895364641/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,077 | INFO     | extracted standard info from prmon json
[2025-11-24 15:13:18] 2025-11-24 14:12:38,077 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:13:18] 2025-11-24 14:12:38,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:13:18] 2025-11-24 14:12:38,097 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:13:18] 2025-11-24 14:12:38,099 | INFO     | sum of square deviations: 122620879339.15114
[2025-11-24 15:13:18] 2025-11-24 14:12:38,117 | INFO     | sum of deviations: 1384031829073.964
[2025-11-24 15:13:18] 2025-11-24 14:12:38,117 | INFO     | mean x: 1763971144.4782016
[2025-11-24 15:13:18] 2025-11-24 14:12:38,117 | INFO     | mean y: 3591495.153950954
[2025-11-24 15:13:18] 2025-11-24 14:12:38,117 | INFO     | intersect: -19906494149.994057
[2025-11-24 15:13:18] 2025-11-24 14:12:38,118 | INFO     | chi2: 6.422963218001613
[2025-11-24 15:13:18] 2025-11-24 14:12:38,120 | INFO     | sum of square deviations: 120132242356.83401
[2025-11-24 15:13:18] 2025-11-24 14:12:38,137 | INFO     | sum of deviations: 1678899579683.8296
[2025-11-24 15:13:18] 2025-11-24 14:12:38,137 | INFO     | mean x: 1763970991.9849107
[2025-11-24 15:13:18] 2025-11-24 14:12:38,138 | INFO     | mean y: 3609559.438957476
[2025-11-24 15:13:18] 2025-11-24 14:12:38,138 | INFO     | intersect: -24648641151.250126
[2025-11-24 15:13:18] 2025-11-24 14:12:38,139 | INFO     | chi2: 3.4471919815765357
[2025-11-24 15:13:18] 2025-11-24 14:12:38,139 | INFO     | current chi2=3.4471919815765357 (change=46.33019270739237 %)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,140 | INFO     | sum of square deviations: 117677512986.95027
[2025-11-24 15:13:18] 2025-11-24 14:12:38,158 | INFO     | sum of deviations: 1798451916117.6777
[2025-11-24 15:13:18] 2025-11-24 14:12:38,158 | INFO     | mean x: 1763970839.4917128
[2025-11-24 15:13:18] 2025-11-24 14:12:38,158 | INFO     | mean y: 3616976.8632596685
[2025-11-24 15:13:18] 2025-11-24 14:12:38,159 | INFO     | intersect: -26954946777.040867
[2025-11-24 15:13:18] 2025-11-24 14:12:38,160 | INFO     | chi2: 2.7736597188504457
[2025-11-24 15:13:18] 2025-11-24 14:12:38,160 | INFO     | current chi2=2.7736597188504457 (change=19.538577088998025 %)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,160 | INFO     | right removable region: 723
[2025-11-24 15:13:18] 2025-11-24 14:12:38,161 | INFO     | sum of square deviations: 120131848907.80272
[2025-11-24 15:13:18] 2025-11-24 14:12:38,179 | INFO     | sum of deviations: 1117253805752.2393
[2025-11-24 15:13:18] 2025-11-24 14:12:38,179 | INFO     | mean x: 1763971296.983539
[2025-11-24 15:13:18] 2025-11-24 14:12:38,179 | INFO     | mean y: 3607816.853223594
[2025-11-24 15:13:18] 2025-11-24 14:12:38,180 | INFO     | intersect: -16401730673.400932
[2025-11-24 15:13:18] 2025-11-24 14:12:38,181 | INFO     | chi2: 4.010912257548534
[2025-11-24 15:13:18] 2025-11-24 14:12:38,181 | INFO     | current chi2=4.010912257548534 (change=37.55355399969961 %)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,182 | INFO     | sum of square deviations: 117676904212.80107
[2025-11-24 15:13:18] 2025-11-24 14:12:38,197 | INFO     | sum of deviations: 1039590240108.9619
[2025-11-24 15:13:18] 2025-11-24 14:12:38,198 | INFO     | mean x: 1763971449.4834254
[2025-11-24 15:13:18] 2025-11-24 14:12:38,198 | INFO     | mean y: 3612639.5801104973
[2025-11-24 15:13:18] 2025-11-24 14:12:38,198 | INFO     | intersect: -15579797843.395048
[2025-11-24 15:13:18] 2025-11-24 14:12:38,199 | INFO     | chi2: 3.9166630889244676
[2025-11-24 15:13:18] 2025-11-24 14:12:38,199 | INFO     | current chi2=3.9166630889244676 (change=2.3498187587297483 %)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,200 | INFO     | left removable region: 20
[2025-11-24 15:13:18] 2025-11-24 14:12:38,201 | INFO     | sum of square deviations: 107731622130.99883
[2025-11-24 15:13:18] 2025-11-24 14:12:38,217 | INFO     | sum of deviations: 1360681589873.785
[2025-11-24 15:13:18] 2025-11-24 14:12:38,217 | INFO     | mean x: 1763971418.9985776
[2025-11-24 15:13:18] 2025-11-24 14:12:38,218 | INFO     | mean y: 3645747.7852062588
[2025-11-24 15:13:18] 2025-11-24 14:12:38,218 | INFO     | intersect: -22275824174.020264
[2025-11-24 15:13:18] 2025-11-24 14:12:38,219 | INFO     | chi2: 0.1881868576960492
[2025-11-24 15:13:18] 2025-11-24 14:12:38,219 | INFO     | current memory leak: 12.63 B/s (using 703 data points, chi2=0.19)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,220 | INFO     | could have reported an average CPU frequency of 2803 MHz (28 samples)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,220 | INFO     | ..............................
[2025-11-24 15:13:18] 2025-11-24 14:12:38,220 | INFO     | . Timing measurements:
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . get job = 0 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . initial setup = 1 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . payload setup = 8 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . stage-in = 0 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . payload execution = 44760 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,221 | INFO     | . stage-out = 2 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,222 | INFO     | . log creation = 0 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,222 | INFO     | ..............................
[2025-11-24 15:13:18] 2025-11-24 14:12:38,378 | INFO     | 
[2025-11-24 15:13:18] 2025-11-24 14:12:38,378 | INFO     | job summary report
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | --------------------------------------------------
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | PanDA job id: 6895364641
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | task id: 47556137
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | errors: (none)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:13:18] 2025-11-24 14:12:38,379 | INFO     | pilot state: finished 
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | transexitcode: 0
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | exeerrorcode: 0
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | exeerrordiag: 
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | exitcode: 0
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | exitmsg: OK
[2025-11-24 15:13:18] 2025-11-24 14:12:38,380 | INFO     | cpuconsumptiontime: 518647 s
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | nevents: 1000
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | neventsw: 0
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | pid: 1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | pgrp: 1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | corecount: 12
[2025-11-24 15:13:18] 2025-11-24 14:12:38,381 | INFO     | event service: False
[2025-11-24 15:13:18] 2025-11-24 14:12:38,382 | INFO     | sizes: {0: 2298637, 1: 2298836, 6: 2299098, 12: 2299126, 44773: 2344933, 44776: 2354720, 44778: 2354904, 44784: 2355150}
[2025-11-24 15:13:18] 2025-11-24 14:12:38,382 | INFO     | --------------------------------------------------
[2025-11-24 15:13:18] 2025-11-24 14:12:38,382 | INFO     | 
[2025-11-24 15:13:18] 2025-11-24 14:12:38,382 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-11-24 15:13:18] 2025-11-24 14:12:38,402 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:13:18] 2025-11-24 14:12:38,406 | INFO     | job 6895364641 has completed (purged errors)
[2025-11-24 15:13:18] 2025-11-24 14:12:38,407 | INFO     | overall cleanup function is called
[2025-11-24 15:13:18] 2025-11-24 14:12:39,428 | INFO     | --- collectZombieJob: --- 10, [1263591]
[2025-11-24 15:13:18] 2025-11-24 14:12:39,429 | INFO     | zombie collector waiting for pid 1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:39,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:13:18] 2025-11-24 14:12:39,429 | INFO     | collected zombie processes
[2025-11-24 15:13:18] 2025-11-24 14:12:39,429 | INFO     | will attempt to kill all subprocesses of pid=1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:39,627 | INFO     | process IDs to be killed: [1263591] (in reverse order)
[2025-11-24 15:13:18] 2025-11-24 14:12:39,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:13:18] 2025-11-24 14:12:39,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:13:18] 2025-11-24 14:12:39,698 | INFO     | did not find any defunct processes belonging to 1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:39,705 | INFO     | did not find any defunct processes belonging to 1263591
[2025-11-24 15:13:18] 2025-11-24 14:12:39,707 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:13:18] 2025-11-24 14:12:39,707 | INFO     | ready for new job
[2025-11-24 15:13:18] 2025-11-24 14:12:39,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:13:18] 2025-11-24 14:12:39,710 | INFO     | ***************************************
[2025-11-24 15:13:18] 2025-11-24 14:12:39,711 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:13:18] 2025-11-24 14:12:39,711 | INFO     | ***************************************
[2025-11-24 15:13:18] 2025-11-24 14:12:39,711 | INFO     | 
[2025-11-24 15:13:18] 2025-11-24 14:12:39,712 | INFO     | architecture information:
[2025-11-24 15:13:18] 2025-11-24 14:12:39,713 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:13:18] 2025-11-24 14:12:39,728 | INFO     | cat /etc/os-release:
[2025-11-24 15:13:18] NAME="CentOS Linux"
[2025-11-24 15:13:18] VERSION="7 (Core)"
[2025-11-24 15:13:18] ID="centos"
[2025-11-24 15:13:18] ID_LIKE="rhel fedora"
[2025-11-24 15:13:18] VERSION_ID="7"
[2025-11-24 15:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:13:18] ANSI_COLOR="0;31"
[2025-11-24 15:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:13:18] HOME_URL="https://www.centos.org/"
[2025-11-24 15:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:13:18] 
[2025-11-24 15:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:13:18] 
[2025-11-24 15:13:18] 2025-11-24 14:12:39,729 | INFO     | ***************************************
[2025-11-24 15:13:18] 2025-11-24 14:12:40,231 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-11-24 15:13:18] 2025-11-24 14:12:40,248 | INFO     | sufficient remaining disk space (230075400192 B)
[2025-11-24 15:13:18] 2025-11-24 14:12:40,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:13:18] 2025-11-24 14:12:40,248 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:13:18] 2025-11-24 14:12:40,249 | INFO     | update_server=False
[2025-11-24 15:13:18] 2025-11-24 14:12:40,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:13:18] 2025-11-24 14:12:40,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:13:18] 2025-11-24 14:12:40,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:13:18] 2025-11-24 14:12:40,250 | INFO     | aborting loop
[2025-11-24 15:13:18] 2025-11-24 14:12:40,434 | INFO     | all payload control threads have been joined
[2025-11-24 15:13:18] 2025-11-24 14:12:40,915 | INFO     | all job control threads have been joined
[2025-11-24 15:13:18] 2025-11-24 14:12:40,975 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:13:18] 2025-11-24 14:12:41,115 | INFO     | all data control threads have been joined
[2025-11-24 15:13:18] 2025-11-24 14:12:41,255 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,255 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,256 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,298 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,440 | INFO     | [payload] control thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,728 | INFO     | [job] validate thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:41,920 | INFO     | [job] control thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,120 | INFO     | [data] control thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,157 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,199 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,384 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,445 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,717 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:13:18] 2025-11-24 14:12:42,765 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:42,980 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:12:46,723 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:13:18] 2025-11-24 14:13:10,990 | INFO     | PID=1256087 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 15:13:18] 2025-11-24 14:13:10,990 | INFO     | .. there are 2 such processes running
[2025-11-24 15:13:18] 2025-11-24 14:13:10,990 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:13:18] 2025-11-24 14:13:10,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:13:18] 2025-11-24 14:13:10,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:13:18] 2025-11-24 14:13:11,057 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:13:18] 2025-11-24 14:13:12,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137224599360)>', '<ExcThread(monitor, started 140136830449408)>']
[2025-11-24 15:13:18] 2025-11-24 14:13:13,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:13:18] 2025-11-24 14:13:13,000 | INFO     | [monitor] control thread has ended
[2025-11-24 15:13:18] 2025-11-24 14:13:17,999 | INFO     | all workflow threads have been joined
[2025-11-24 15:13:18] 2025-11-24 14:13:17,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:13:18] 2025-11-24 14:13:18,000 | INFO     | traces error code: 0
[2025-11-24 15:13:18] 2025-11-24 14:13:18,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:13:18] 2025-11-24 14:13:18,119 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:13:18] 2025-11-24 14:13:18,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:13:18] 2025-11-24 14:13:18,124 [wrapper] pilotpid: 1256087
[2025-11-24 15:13:18] 2025-11-24 14:13:18,127 [wrapper] Pilot exit status: 0
[2025-11-24 15:13:18] 2025-11-24 14:13:18,136 [wrapper] pandaids: 6895364641
[2025-11-24 15:13:18] 2025-11-24 14:13:18,173 [wrapper] cleanup supervisor_pilot 1495249 1256088
[2025-11-24 15:13:18] 2025-11-24 14:13:18,176 [wrapper] Test setup, not cleaning
[2025-11-24 15:13:18] 2025-11-24 14:13:18,178 [wrapper] apfmon messages muted
[2025-11-24 15:13:18] 2025-11-24 14:13:18,181 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:13:18] 2025-11-24 14:13:18,183 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:13:18]  *** Error codes and diagnostics ***
[2025-11-24 15:13:18]     "exeErrorCode": 0,
[2025-11-24 15:13:18]     "exeErrorDiag": "",
[2025-11-24 15:13:18]     "pilotErrorCode": 0,
[2025-11-24 15:13:18]     "pilotErrorDiag": "",
[2025-11-24 15:13:18]  *** Listing of results directory ***
[2025-11-24 15:13:18] total 1317700
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc      5112 Nov 23 17:03 queuedata.json
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc    576529 Nov 23 17:03 pilot3.tar.gz
[2025-11-24 15:13:18] -rwx------ 1 boinc boinc     36292 Nov 23 17:03 runpilot2-wrapper.sh
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc       100 Nov 24 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:13:18] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 02:45 run_atlas
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc       105 Nov 24 02:45 job.xml
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc      6296 Nov 24 02:45 init_data.xml
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc 409238228 Nov 24 02:45 EVNT.47483658._000811.pool.root.1
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc     15847 Nov 24 02:45 start_atlas.sh
[2025-11-24 15:13:18] drwxrwx--x 2 boinc boinc        68 Nov 24 02:45 shared
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc    590100 Nov 24 02:45 input.tar.gz
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc         0 Nov 24 02:45 boinc_lockfile
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc      2786 Nov 24 02:45 pandaJob.out
[2025-11-24 15:13:18] -rw------- 1 boinc boinc    989786 Nov 24 02:45 agis_schedconf.cvmfs.json
[2025-11-24 15:13:18] drwx------ 5 boinc boinc      4096 Nov 24 02:45 pilot3
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc       533 Nov 24 15:00 boinc_task_state.xml
[2025-11-24 15:13:18] -rw------- 1 boinc boinc 918651503 Nov 24 15:11 HITS.47556137._007977.pool.root.1
[2025-11-24 15:13:18] -rw------- 1 boinc boinc        95 Nov 24 15:12 pilot_heartbeat.json
[2025-11-24 15:13:18] -rw------- 1 boinc boinc      1037 Nov 24 15:12 memory_monitor_summary.json
[2025-11-24 15:13:18] -rw------- 1 boinc boinc   1516227 Nov 24 15:12 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:13:18] -rw------- 1 boinc boinc   2441387 Nov 24 15:12 log.47556137._007977.job.log.tgz.1
[2025-11-24 15:13:18] -rw------- 1 boinc boinc      8610 Nov 24 15:12 heartbeat.json
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc      8192 Nov 24 15:12 boinc_mmap_file
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc        29 Nov 24 15:12 wrapper_checkpoint.txt
[2025-11-24 15:13:18] -rw------- 1 boinc boinc      4825 Nov 24 15:13 pilotlog.txt
[2025-11-24 15:13:18] -rw------- 1 boinc boinc   6320876 Nov 24 15:13 log.47556137._007977.job.log.1
[2025-11-24 15:13:18] -rw------- 1 boinc boinc       353 Nov 24 15:13 output.list
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc       620 Nov 24 15:13 runtime_log
[2025-11-24 15:13:18] -rw------- 1 boinc boinc   8785920 Nov 24 15:13 result.tar.gz
[2025-11-24 15:13:18] -rw------- 1 boinc boinc       666 Nov 24 15:13 t4GNDmKkRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE2KKDmELrUsn.diag
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc      8858 Nov 24 15:13 runtime_log.err
[2025-11-24 15:13:18] -rw-r--r-- 1 boinc boinc     21450 Nov 24 15:13 stderr.txt
[2025-11-24 15:13:18] HITS file was successfully produced:
[2025-11-24 15:13:18] -rw------- 1 boinc boinc 918651503 Nov 24 15:11 shared/HITS.pool.root.1
[2025-11-24 15:13:18]  *** Contents of shared directory: ***
[2025-11-24 15:13:18] total 1305948
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc 409238228 Nov 24 02:45 ATLAS.root_0
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc     15847 Nov 24 02:45 start_atlas.sh
[2025-11-24 15:13:18] -rw-r--r-- 2 boinc boinc    590100 Nov 24 02:45 input.tar.gz
[2025-11-24 15:13:18] -rw------- 1 boinc boinc 918651503 Nov 24 15:11 HITS.pool.root.1
[2025-11-24 15:13:18] -rw------- 1 boinc boinc   8785920 Nov 24 15:13 result.tar.gz
15:13:19 (1252239): run_atlas exited; CPU time 516979.615027
15:13:19 (1252239): called boinc_finish(0)

</stderr_txt>
]]>

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