Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:45:34 (27133): wrapper (7.7.26015): starting
19:45:34 (27133): wrapper: running run_atlas (--nthreads 12)
[2025-11-23 19:45:34] Arguments: --nthreads 12
[2025-11-23 19:45:34] Threads: 12
[2025-11-23 19:45:34] Checking for CVMFS
[2025-11-23 19:45:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 19:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 19:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 19:45:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 19:45:34] 2.11.2.0 723 114046 91036 153227 1 81 13441921 20275200 1 130560 0 48941521 99.912 6245079 33061 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 19:45:34] CVMFS is ok
[2025-11-23 19:45:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:45:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:45:34] Further information can be found at the LHC@home message board.
[2025-11-23 19:45:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:45:34] Checking for apptainer binary...
[2025-11-23 19:45:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 19:45:34] Running /usr/bin/apptainer --version
[2025-11-23 19:45:34] apptainer version 1.3.2-1.el7
[2025-11-23 19:45:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:45:36] c-205-1.aglt2.org
[2025-11-23 19:45:36] apptainer works
[2025-11-23 19:45:36] Set ATHENA_PROC_NUMBER=12
[2025-11-23 19:45:36] Set ATHENA_CORE_NUMBER=12
[2025-11-23 19:45:36] Starting ATLAS job with PandaID=6895354762
[2025-11-23 19:45:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:03:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:03:49] 2025-11-24 08:03:13,851 | INFO     | time since job start (26241s) is within the limit (172800.0s)
[2025-11-24 03:03:49] 2025-11-24 08:03:14,487 | INFO     | monitor loop #1966: job 0:6895354762 is in state 'finished'
[2025-11-24 03:03:49] 2025-11-24 08:03:14,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 03:03:49] 2025-11-24 08:03:15,856 | INFO     | time since job start (26243s) is within the limit (172800.0s)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,771 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 03:03:49] 2025-11-24 08:03:16,776 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 03:03:49] 2025-11-24 08:03:16,779 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895354762/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,780 | INFO     | extracted standard info from prmon json
[2025-11-24 03:03:49] 2025-11-24 08:03:16,780 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:03:49] 2025-11-24 08:03:16,780 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:03:49] 2025-11-24 08:03:16,789 | INFO     | fitting pss+swap vs Time
[2025-11-24 03:03:49] 2025-11-24 08:03:16,790 | INFO     | sum of square deviations: 24653729848.511547
[2025-11-24 03:03:49] 2025-11-24 08:03:16,793 | INFO     | sum of deviations: 384566038092.395
[2025-11-24 03:03:49] 2025-11-24 08:03:16,794 | INFO     | mean x: 1763958265.7209303
[2025-11-24 03:03:49] 2025-11-24 08:03:16,794 | INFO     | mean y: 3426421.8116279067
[2025-11-24 03:03:49] 2025-11-24 08:03:16,794 | INFO     | intersect: -27512022387.634373
[2025-11-24 03:03:49] 2025-11-24 08:03:16,794 | INFO     | chi2: 6.269640610479544
[2025-11-24 03:03:49] 2025-11-24 08:03:16,795 | INFO     | sum of square deviations: 23803705675.76469
[2025-11-24 03:03:49] 2025-11-24 08:03:16,799 | INFO     | sum of deviations: 559031709488.0941
[2025-11-24 03:03:49] 2025-11-24 08:03:16,799 | INFO     | mean x: 1763958113.2235293
[2025-11-24 03:03:49] 2025-11-24 08:03:16,799 | INFO     | mean y: 3457710.8305882355
[2025-11-24 03:03:49] 2025-11-24 08:03:16,799 | INFO     | intersect: -41423223198.971245
[2025-11-24 03:03:49] 2025-11-24 08:03:16,800 | INFO     | chi2: 2.9235326588337545
[2025-11-24 03:03:49] 2025-11-24 08:03:16,800 | INFO     | current chi2=2.9235326588337545 (change=53.370012087341266 %)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,800 | INFO     | sum of square deviations: 22973449315.511993
[2025-11-24 03:03:49] 2025-11-24 08:03:16,804 | INFO     | sum of deviations: 590495874701.8214
[2025-11-24 03:03:49] 2025-11-24 08:03:16,804 | INFO     | mean x: 1763957960.7261906
[2025-11-24 03:03:49] 2025-11-24 08:03:16,804 | INFO     | mean y: 3463447.007142857
[2025-11-24 03:03:49] 2025-11-24 08:03:16,804 | INFO     | intersect: -45336262627.69003
[2025-11-24 03:03:49] 2025-11-24 08:03:16,805 | INFO     | chi2: 2.6046111248979225
[2025-11-24 03:03:49] 2025-11-24 08:03:16,805 | INFO     | current chi2=2.6046111248979225 (change=10.908772746977114 %)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,805 | INFO     | right removable region: 419
[2025-11-24 03:03:49] 2025-11-24 08:03:16,806 | INFO     | sum of square deviations: 23803647725.76469
[2025-11-24 03:03:49] 2025-11-24 08:03:16,809 | INFO     | sum of deviations: 236755606044.6115
[2025-11-24 03:03:49] 2025-11-24 08:03:16,810 | INFO     | mean x: 1763958418.2235293
[2025-11-24 03:03:49] 2025-11-24 08:03:16,810 | INFO     | mean y: 3452866.4988235296
[2025-11-24 03:03:49] 2025-11-24 08:03:16,810 | INFO     | intersect: -17541212940.83343
[2025-11-24 03:03:49] 2025-11-24 08:03:16,810 | INFO     | chi2: 3.821847389069253
[2025-11-24 03:03:49] 2025-11-24 08:03:16,810 | INFO     | current chi2=3.821847389069253 (change=39.0420021415401 %)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,811 | INFO     | sum of square deviations: 22973359217.96194
[2025-11-24 03:03:49] 2025-11-24 08:03:16,815 | INFO     | sum of deviations: 204003726282.67664
[2025-11-24 03:03:49] 2025-11-24 08:03:16,815 | INFO     | mean x: 1763958570.7238095
[2025-11-24 03:03:49] 2025-11-24 08:03:16,815 | INFO     | mean y: 3458874.9023809526
[2025-11-24 03:03:49] 2025-11-24 08:03:16,815 | INFO     | intersect: -15660515993.629953
[2025-11-24 03:03:49] 2025-11-24 08:03:16,815 | INFO     | chi2: 3.7698325993440047
[2025-11-24 03:03:49] 2025-11-24 08:03:16,816 | INFO     | current chi2=3.7698325993440047 (change=1.3609855242784936 %)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,816 | INFO     | left removable region: 20
[2025-11-24 03:03:49] 2025-11-24 08:03:16,816 | INFO     | sum of square deviations: 19696856760.24543
[2025-11-24 03:03:49] 2025-11-24 08:03:16,820 | INFO     | sum of deviations: 368305446456.82446
[2025-11-24 03:03:49] 2025-11-24 08:03:16,820 | INFO     | mean x: 1763958540.2280703
[2025-11-24 03:03:49] 2025-11-24 08:03:16,820 | INFO     | mean y: 3504945.1228070175
[2025-11-24 03:03:49] 2025-11-24 08:03:16,820 | INFO     | intersect: -32980211472.071293
[2025-11-24 03:03:49] 2025-11-24 08:03:16,821 | INFO     | chi2: 0.044366978395513325
[2025-11-24 03:03:49] 2025-11-24 08:03:16,821 | INFO     | current memory leak: 18.70 B/s (using 399 data points, chi2=0.04)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,821 | INFO     | could have reported an average CPU frequency of 2383 MHz (18 samples)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,821 | INFO     | ..............................
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . Timing measurements:
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . get job = 0 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . initial setup = 2 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . payload setup = 7 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . stage-in = 0 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . payload execution = 26207 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . stage-out = 3 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | . log creation = 0 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,822 | INFO     | ..............................
[2025-11-24 03:03:49] 2025-11-24 08:03:16,914 | INFO     | 
[2025-11-24 03:03:49] 2025-11-24 08:03:16,915 | INFO     | job summary report
[2025-11-24 03:03:49] 2025-11-24 08:03:16,915 | INFO     | --------------------------------------------------
[2025-11-24 03:03:49] 2025-11-24 08:03:16,915 | INFO     | PanDA job id: 6895354762
[2025-11-24 03:03:49] 2025-11-24 08:03:16,915 | INFO     | task id: 47556137
[2025-11-24 03:03:49] 2025-11-24 08:03:16,915 | INFO     | errors: (none)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | pilot state: finished 
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | transexitcode: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | exeerrorcode: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | exeerrordiag: 
[2025-11-24 03:03:49] 2025-11-24 08:03:16,916 | INFO     | exitcode: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | exitmsg: OK
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | cpuconsumptiontime: 300295 s
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | nevents: 1000
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | neventsw: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | pid: 6066
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | pgrp: 6066
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | corecount: 12
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | event service: False
[2025-11-24 03:03:49] 2025-11-24 08:03:16,917 | INFO     | sizes: {0: 2298580, 1: 2298835, 6: 2299097, 12: 2299125, 26219: 2336528, 26222: 2345522, 26223: 2345706, 26229: 2345952}
[2025-11-24 03:03:49] 2025-11-24 08:03:16,918 | INFO     | --------------------------------------------------
[2025-11-24 03:03:49] 2025-11-24 08:03:16,918 | INFO     | 
[2025-11-24 03:03:49] 2025-11-24 08:03:16,918 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 03:03:49] 2025-11-24 08:03:16,941 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,941 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,941 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,941 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,943 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:03:49] 2025-11-24 08:03:16,944 | INFO     | job 6895354762 has completed (purged errors)
[2025-11-24 03:03:49] 2025-11-24 08:03:16,945 | INFO     | overall cleanup function is called
[2025-11-24 03:03:49] 2025-11-24 08:03:17,961 | INFO     | --- collectZombieJob: --- 10, [6066]
[2025-11-24 03:03:49] 2025-11-24 08:03:17,962 | INFO     | zombie collector waiting for pid 6066
[2025-11-24 03:03:49] 2025-11-24 08:03:17,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:03:49] 2025-11-24 08:03:17,962 | INFO     | collected zombie processes
[2025-11-24 03:03:49] 2025-11-24 08:03:17,962 | INFO     | will attempt to kill all subprocesses of pid=6066
[2025-11-24 03:03:49] 2025-11-24 08:03:18,058 | INFO     | process IDs to be killed: [6066] (in reverse order)
[2025-11-24 03:03:49] 2025-11-24 08:03:18,106 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:03:49] 2025-11-24 08:03:18,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:03:49] 2025-11-24 08:03:18,110 | INFO     | did not find any defunct processes belonging to 6066
[2025-11-24 03:03:49] 2025-11-24 08:03:18,113 | INFO     | did not find any defunct processes belonging to 6066
[2025-11-24 03:03:49] 2025-11-24 08:03:18,116 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:03:49] 2025-11-24 08:03:18,116 | INFO     | ready for new job
[2025-11-24 03:03:49] 2025-11-24 08:03:18,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:03:49] 2025-11-24 08:03:18,118 | INFO     | ***************************************
[2025-11-24 03:03:49] 2025-11-24 08:03:18,118 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:03:49] 2025-11-24 08:03:18,118 | INFO     | ***************************************
[2025-11-24 03:03:49] 2025-11-24 08:03:18,119 | INFO     | 
[2025-11-24 03:03:49] 2025-11-24 08:03:18,119 | INFO     | architecture information:
[2025-11-24 03:03:49] 2025-11-24 08:03:18,120 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:03:49] 2025-11-24 08:03:18,135 | INFO     | cat /etc/os-release:
[2025-11-24 03:03:49] NAME="CentOS Linux"
[2025-11-24 03:03:49] VERSION="7 (Core)"
[2025-11-24 03:03:49] ID="centos"
[2025-11-24 03:03:49] ID_LIKE="rhel fedora"
[2025-11-24 03:03:49] VERSION_ID="7"
[2025-11-24 03:03:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:03:49] ANSI_COLOR="0;31"
[2025-11-24 03:03:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:03:49] HOME_URL="https://www.centos.org/"
[2025-11-24 03:03:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:03:49] 
[2025-11-24 03:03:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:03:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:03:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:03:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:03:49] 
[2025-11-24 03:03:49] 2025-11-24 08:03:18,136 | INFO     | ***************************************
[2025-11-24 03:03:49] 2025-11-24 08:03:18,639 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 03:03:49] 2025-11-24 08:03:18,656 | INFO     | sufficient remaining disk space (28375515136 B)
[2025-11-24 03:03:49] 2025-11-24 08:03:18,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:03:49] 2025-11-24 08:03:18,657 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:03:49] 2025-11-24 08:03:18,657 | INFO     | update_server=False
[2025-11-24 03:03:49] 2025-11-24 08:03:18,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:03:49] 2025-11-24 08:03:18,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:03:49] 2025-11-24 08:03:18,658 | INFO     | aborting loop
[2025-11-24 03:03:49] 2025-11-24 08:03:18,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:03:49] 2025-11-24 08:03:18,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:03:49] 2025-11-24 08:03:19,433 | INFO     | all data control threads have been joined
[2025-11-24 03:03:49] 2025-11-24 08:03:19,663 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:19,663 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:19,664 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:19,762 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:19,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,089 | INFO     | all job control threads have been joined
[2025-11-24 03:03:49] 2025-11-24 08:03:20,106 | INFO     | [job] validate thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,148 | INFO     | all payload control threads have been joined
[2025-11-24 03:03:49] 2025-11-24 08:03:20,439 | INFO     | [data] control thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,617 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,664 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,716 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:20,978 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:21,065 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:21,093 | INFO     | [job] control thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:21,153 | INFO     | [payload] control thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:21,156 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:21,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:03:49] 2025-11-24 08:03:25,430 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:03:49] 2025-11-24 08:03:34,179 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:03:49] 2025-11-24 08:03:36,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052891047744)>', '<ExcThread(monitor, started 140052592039680)>']
[2025-11-24 03:03:49] 2025-11-24 08:03:41,164 | INFO     | all workflow threads have been joined
[2025-11-24 03:03:49] 2025-11-24 08:03:41,164 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:03:49] 2025-11-24 08:03:41,166 | INFO     | traces error code: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:41,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | INFO     | PID=30830 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:03:49] 2025-11-24 08:03:49,070 | INFO     | [monitor] control thread has ended
[2025-11-24 03:03:49] 2025-11-24 08:03:49,176 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:03:49] 2025-11-24 08:03:49,180 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:03:49] 2025-11-24 08:03:49,184 [wrapper] pilotpid: 30830
[2025-11-24 03:03:49] 2025-11-24 08:03:49,188 [wrapper] Pilot exit status: 0
[2025-11-24 03:03:49] 2025-11-24 08:03:49,202 [wrapper] pandaids: 6895354762
[2025-11-24 03:03:49] 2025-11-24 08:03:49,241 [wrapper] cleanup supervisor_pilot 22256 30831
[2025-11-24 03:03:49] 2025-11-24 08:03:49,245 [wrapper] Test setup, not cleaning
[2025-11-24 03:03:49] 2025-11-24 08:03:49,249 [wrapper] apfmon messages muted
[2025-11-24 03:03:49] 2025-11-24 08:03:49,253 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:03:49] 2025-11-24 08:03:49,257 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:03:49]  *** Error codes and diagnostics ***
[2025-11-24 03:03:49]     "exeErrorCode": 0,
[2025-11-24 03:03:49]     "exeErrorDiag": "",
[2025-11-24 03:03:49]     "pilotErrorCode": 0,
[2025-11-24 03:03:49]     "pilotErrorDiag": "",
[2025-11-24 03:03:49]  *** Listing of results directory ***
[2025-11-24 03:03:49] total 1311756
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 00:21 pilot3.tar.gz
[2025-11-24 03:03:49] -rwx------ 1 boincer umatlas     36292 Nov 23 00:35 runpilot2-wrapper.sh
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 00:35 queuedata.json
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas       100 Nov 23 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:03:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 23 19:45 run_atlas
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas       105 Nov 23 19:45 job.xml
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas 408261803 Nov 23 19:45 EVNT.47483658._000633.pool.root.1
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:45 start_atlas.sh
[2025-11-24 03:03:49] drwxrwx--x 2 boincer umatlas      4096 Nov 23 19:45 shared
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas    590097 Nov 23 19:45 input.tar.gz
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas         0 Nov 23 19:45 boinc_lockfile
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas      2786 Nov 23 19:45 pandaJob.out
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas        57 Nov 23 19:45 setup.sh.local
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas    989786 Nov 23 19:45 agis_schedconf.cvmfs.json
[2025-11-24 03:03:49] drwx------ 5 boincer umatlas      4096 Nov 23 19:45 pilot3
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas       533 Nov 24 02:54 boinc_task_state.xml
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 02:58 init_data.xml
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas 919344710 Nov 24 03:02 HITS.47556137._006283.pool.root.1
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas        95 Nov 24 03:02 pilot_heartbeat.json
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas      1064 Nov 24 03:03 memory_monitor_summary.json
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas   1526164 Nov 24 03:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas   2185114 Nov 24 03:03 log.47556137._006283.job.log.tgz.1
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas      8674 Nov 24 03:03 heartbeat.json
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas        29 Nov 24 03:03 wrapper_checkpoint.txt
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 03:03 boinc_mmap_file
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas       745 Nov 24 03:03 pilotlog.txt
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas   3668031 Nov 24 03:03 log.47556137._006283.job.log.1
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas       353 Nov 24 03:03 output.list
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas       620 Nov 24 03:03 runtime_log
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas   5877760 Nov 24 03:03 result.tar.gz
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas      9340 Nov 24 03:03 runtime_log.err
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas       669 Nov 24 03:03 KOpLDmmvHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcfKKDm5CDHWm.diag
[2025-11-24 03:03:49] -rw-r--r-- 1 boincer umatlas     21319 Nov 24 03:03 stderr.txt
[2025-11-24 03:03:49] HITS file was successfully produced:
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas 919344710 Nov 24 03:02 shared/HITS.pool.root.1
[2025-11-24 03:03:49]  *** Contents of shared directory: ***
[2025-11-24 03:03:49] total 1302836
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas 408261803 Nov 23 19:45 ATLAS.root_0
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas     15847 Nov 23 19:45 start_atlas.sh
[2025-11-24 03:03:49] -rw-r--r-- 2 boincer umatlas    590097 Nov 23 19:45 input.tar.gz
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas 919344710 Nov 24 03:02 HITS.pool.root.1
[2025-11-24 03:03:49] -rw------- 1 boincer umatlas   5877760 Nov 24 03:03 result.tar.gz
03:03:51 (27133): run_atlas exited; CPU time 293161.163028
03:03:51 (27133): called boinc_finish(0)

</stderr_txt>
]]>

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