Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:41:52 (3848014): wrapper (7.7.26015): starting
20:41:52 (3848014): wrapper: running run_atlas (--nthreads 9)
[2025-11-23 20:41:52] Arguments: --nthreads 9
[2025-11-23 20:41:52] Threads: 9
[2025-11-23 20:41:52] Checking for CVMFS
[2025-11-23 20:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 20:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 20:41:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 20:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 20:41:52] 2.13.3.0 3025293 5426 93340 153228 2 81 13313014 37030912 1932 16776704 0 6031735 99.906 650431 16166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-23 20:41:52] CVMFS is ok
[2025-11-23 20:41:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 20:41:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 20:41:52] Further information can be found at the LHC@home message board.
[2025-11-23 20:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 20:41:52] Checking for apptainer binary...
[2025-11-23 20:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 20:41:52] Running /usr/bin/apptainer --version
[2025-11-23 20:41:52] apptainer version 1.4.4-1.el9
[2025-11-23 20:41:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 20:41:53] c-205-37.aglt2.org
[2025-11-23 20:41:53] apptainer works
[2025-11-23 20:41:53] Set ATHENA_PROC_NUMBER=9
[2025-11-23 20:41:53] Set ATHENA_CORE_NUMBER=9
[2025-11-23 20:41:53] Starting ATLAS job with PandaID=6895354735
[2025-11-23 20:41:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:23:58]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:23:58] 2025-11-24 10:23:01,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:23:58] 2025-11-24 10:23:01,930 | INFO     | time since job start (31258s) is within the limit (172800.0s)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,475 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 05:23:58] 2025-11-24 10:23:03,481 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.6751249999998
[2025-11-24 05:23:58] 2025-11-24 10:23:03,487 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895354735/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,488 | INFO     | extracted standard info from prmon json
[2025-11-24 05:23:58] 2025-11-24 10:23:03,488 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:23:58] 2025-11-24 10:23:03,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:23:58] 2025-11-24 10:23:03,498 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:23:58] 2025-11-24 10:23:03,499 | INFO     | sum of square deviations: 41618494339.997925
[2025-11-24 05:23:58] 2025-11-24 10:23:03,507 | INFO     | sum of deviations: 636503602415.0256
[2025-11-24 05:23:58] 2025-11-24 10:23:03,507 | INFO     | mean x: 1763964132.5019531
[2025-11-24 05:23:58] 2025-11-24 10:23:03,507 | INFO     | mean y: 3110436.474609375
[2025-11-24 05:23:58] 2025-11-24 10:23:03,507 | INFO     | intersect: -26974547998.163628
[2025-11-24 05:23:58] 2025-11-24 10:23:03,508 | INFO     | chi2: 4.306022326997068
[2025-11-24 05:23:58] 2025-11-24 10:23:03,509 | INFO     | sum of square deviations: 40411067354.99811
[2025-11-24 05:23:58] 2025-11-24 10:23:03,516 | INFO     | sum of deviations: 783930154383.5658
[2025-11-24 05:23:58] 2025-11-24 10:23:03,516 | INFO     | mean x: 1763963980.0019724
[2025-11-24 05:23:58] 2025-11-24 10:23:03,516 | INFO     | mean y: 3129023.4339250494
[2025-11-24 05:23:58] 2025-11-24 10:23:03,516 | INFO     | intersect: -34215827457.530323
[2025-11-24 05:23:58] 2025-11-24 10:23:03,517 | INFO     | chi2: 1.9733373569395618
[2025-11-24 05:23:58] 2025-11-24 10:23:03,517 | INFO     | current chi2=1.9733373569395618 (change=54.17261669621377 %)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,518 | INFO     | sum of square deviations: 39227222207.49794
[2025-11-24 05:23:58] 2025-11-24 10:23:03,525 | INFO     | sum of deviations: 776514004219.068
[2025-11-24 05:23:58] 2025-11-24 10:23:03,525 | INFO     | mean x: 1763963827.501992
[2025-11-24 05:23:58] 2025-11-24 10:23:03,525 | INFO     | mean y: 3128059.932270916
[2025-11-24 05:23:58] 2025-11-24 10:23:03,525 | INFO     | intersect: -34915036875.26803
[2025-11-24 05:23:58] 2025-11-24 10:23:03,526 | INFO     | chi2: 1.9399331632340595
[2025-11-24 05:23:58] 2025-11-24 10:23:03,526 | INFO     | current chi2=1.9399331632340595 (change=1.6927766348734552 %)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,527 | INFO     | right removable region: 501
[2025-11-24 05:23:58] 2025-11-24 10:23:03,527 | INFO     | sum of square deviations: 40411066744.99811
[2025-11-24 05:23:58] 2025-11-24 10:23:03,534 | INFO     | sum of deviations: 505706733399.69836
[2025-11-24 05:23:58] 2025-11-24 10:23:03,535 | INFO     | mean x: 1763964285.0019724
[2025-11-24 05:23:58] 2025-11-24 10:23:03,535 | INFO     | mean y: 3126904.301775148
[2025-11-24 05:23:58] 2025-11-24 10:23:03,535 | INFO     | intersect: -22071237576.870834
[2025-11-24 05:23:58] 2025-11-24 10:23:03,536 | INFO     | chi2: 2.4827764592964594
[2025-11-24 05:23:58] 2025-11-24 10:23:03,536 | INFO     | current chi2=2.4827764592964594 (change=42.341765305525094 %)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,537 | INFO     | sum of square deviations: 39227220987.49794
[2025-11-24 05:23:58] 2025-11-24 10:23:03,544 | INFO     | sum of deviations: 473243047263.67725
[2025-11-24 05:23:58] 2025-11-24 10:23:03,544 | INFO     | mean x: 1763964437.501992
[2025-11-24 05:23:58] 2025-11-24 10:23:03,544 | INFO     | mean y: 3131082.822709163
[2025-11-24 05:23:58] 2025-11-24 10:23:03,544 | INFO     | intersect: -21277599100.287994
[2025-11-24 05:23:58] 2025-11-24 10:23:03,545 | INFO     | chi2: 2.457060528405642
[2025-11-24 05:23:58] 2025-11-24 10:23:03,545 | INFO     | current chi2=2.457060528405642 (change=1.0357731077450418 %)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,545 | INFO     | left removable region: 20
[2025-11-24 05:23:58] 2025-11-24 10:23:03,546 | INFO     | sum of square deviations: 34507335342.99772
[2025-11-24 05:23:58] 2025-11-24 10:23:03,552 | INFO     | sum of deviations: 574156601588.9894
[2025-11-24 05:23:58] 2025-11-24 10:23:03,553 | INFO     | mean x: 1763964407.002079
[2025-11-24 05:23:58] 2025-11-24 10:23:03,553 | INFO     | mean y: 3154250.0103950105
[2025-11-24 05:23:58] 2025-11-24 10:23:03,553 | INFO     | intersect: -29346889709.665207
[2025-11-24 05:23:58] 2025-11-24 10:23:03,554 | INFO     | chi2: 0.06873449437010307
[2025-11-24 05:23:58] 2025-11-24 10:23:03,554 | INFO     | current memory leak: 16.64 B/s (using 481 data points, chi2=0.07)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | could have reported an average CPU frequency of 2609 MHz (21 samples)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | ..............................
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | . Timing measurements:
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | . get job = 0 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | . initial setup = 2 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | . payload setup = 5 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,555 | INFO     | . stage-in = 0 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,556 | INFO     | . payload execution = 31223 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,556 | INFO     | . stage-out = 3 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,556 | INFO     | . log creation = 0 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,556 | INFO     | ..............................
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | 
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | job summary report
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | --------------------------------------------------
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | PanDA job id: 6895354735
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | task id: 47556137
[2025-11-24 05:23:58] 2025-11-24 10:23:03,795 | INFO     | errors: (none)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | pilot state: finished 
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | transexitcode: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | exeerrorcode: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | exeerrordiag: 
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | exitcode: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | exitmsg: OK
[2025-11-24 05:23:58] 2025-11-24 10:23:03,796 | INFO     | cpuconsumptiontime: 276367 s
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | nevents: 1000
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | neventsw: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | pid: 3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | pgrp: 3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | corecount: 9
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | event service: False
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | sizes: {0: 2298806, 4: 2299068, 11: 2299096, 31232: 2338431, 31233: 2338430, 31237: 2347480, 31240: 2347664, 31245: 2347910}
[2025-11-24 05:23:58] 2025-11-24 10:23:03,797 | INFO     | --------------------------------------------------
[2025-11-24 05:23:58] 2025-11-24 10:23:03,798 | INFO     | 
[2025-11-24 05:23:58] 2025-11-24 10:23:03,798 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 05:23:58] 2025-11-24 10:23:03,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | job 6895354735 has completed (purged errors)
[2025-11-24 05:23:58] 2025-11-24 10:23:03,818 | INFO     | overall cleanup function is called
[2025-11-24 05:23:58] 2025-11-24 10:23:04,835 | INFO     | --- collectZombieJob: --- 10, [3858185]
[2025-11-24 05:23:58] 2025-11-24 10:23:04,835 | INFO     | zombie collector waiting for pid 3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:04,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:23:58] 2025-11-24 10:23:04,836 | INFO     | collected zombie processes
[2025-11-24 05:23:58] 2025-11-24 10:23:04,836 | INFO     | will attempt to kill all subprocesses of pid=3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:05,033 | INFO     | process IDs to be killed: [3858185] (in reverse order)
[2025-11-24 05:23:58] 2025-11-24 10:23:05,088 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:23:58] 2025-11-24 10:23:05,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:23:58] 2025-11-24 10:23:05,095 | INFO     | did not find any defunct processes belonging to 3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:05,100 | INFO     | did not find any defunct processes belonging to 3858185
[2025-11-24 05:23:58] 2025-11-24 10:23:05,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:23:58] 2025-11-24 10:23:05,102 | INFO     | ready for new job
[2025-11-24 05:23:58] 2025-11-24 10:23:05,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:23:58] 2025-11-24 10:23:05,105 | INFO     | ***************************************
[2025-11-24 05:23:58] 2025-11-24 10:23:05,105 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:23:58] 2025-11-24 10:23:05,105 | INFO     | ***************************************
[2025-11-24 05:23:58] 2025-11-24 10:23:05,106 | INFO     | 
[2025-11-24 05:23:58] 2025-11-24 10:23:05,108 | INFO     | architecture information:
[2025-11-24 05:23:58] 2025-11-24 10:23:05,108 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:23:58] 2025-11-24 10:23:05,122 | INFO     | cat /etc/os-release:
[2025-11-24 05:23:58] NAME="CentOS Linux"
[2025-11-24 05:23:58] VERSION="7 (Core)"
[2025-11-24 05:23:58] ID="centos"
[2025-11-24 05:23:58] ID_LIKE="rhel fedora"
[2025-11-24 05:23:58] VERSION_ID="7"
[2025-11-24 05:23:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:23:58] ANSI_COLOR="0;31"
[2025-11-24 05:23:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:23:58] HOME_URL="https://www.centos.org/"
[2025-11-24 05:23:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:23:58] 
[2025-11-24 05:23:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:23:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:23:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:23:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:23:58] 
[2025-11-24 05:23:58] 2025-11-24 10:23:05,122 | INFO     | ***************************************
[2025-11-24 05:23:58] 2025-11-24 10:23:05,624 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 05:23:58] 2025-11-24 10:23:05,638 | INFO     | sufficient remaining disk space (39147536384 B)
[2025-11-24 05:23:58] 2025-11-24 10:23:05,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:23:58] 2025-11-24 10:23:05,638 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:23:58] 2025-11-24 10:23:05,639 | INFO     | update_server=False
[2025-11-24 05:23:58] 2025-11-24 10:23:05,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:23:58] 2025-11-24 10:23:05,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:23:58] 2025-11-24 10:23:05,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:23:58] 2025-11-24 10:23:05,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:23:58] 2025-11-24 10:23:05,640 | INFO     | aborting loop
[2025-11-24 05:23:58] 2025-11-24 10:23:06,634 | INFO     | all payload control threads have been joined
[2025-11-24 05:23:58] 2025-11-24 10:23:06,644 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,645 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,645 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,701 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,702 | INFO     | [job] validate thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,727 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:06,734 | INFO     | all data control threads have been joined
[2025-11-24 05:23:58] 2025-11-24 10:23:06,919 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,021 | INFO     | all job control threads have been joined
[2025-11-24 05:23:58] 2025-11-24 10:23:07,033 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,640 | INFO     | [payload] control thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,644 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,740 | INFO     | [data] control thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,807 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:07,878 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:08,024 | INFO     | [job] control thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:09,068 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:23:58] 2025-11-24 10:23:13,074 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:16,599 | INFO     | job.realtimelogging is not enabled
[2025-11-24 05:23:58] 2025-11-24 10:23:17,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:23:58] 2025-11-24 10:23:35,254 | INFO     | PID=3851763 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 05:23:58] 2025-11-24 10:23:35,254 | INFO     | .. there are 3 such processes running
[2025-11-24 05:23:58] 2025-11-24 10:23:35,255 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:23:58] 2025-11-24 10:23:35,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:23:58] 2025-11-24 10:23:35,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:23:58] 2025-11-24 10:23:52,876 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:23:58] 2025-11-24 10:23:52,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485530335040)>', '<ExcThread(monitor, started 140484823480064)>']
[2025-11-24 05:23:58] 2025-11-24 10:23:53,346 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:23:58] 2025-11-24 10:23:53,347 | INFO     | [monitor] control thread has ended
[2025-11-24 05:23:58] 2025-11-24 10:23:58,010 | INFO     | all workflow threads have been joined
[2025-11-24 05:23:58] 2025-11-24 10:23:58,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:23:58] 2025-11-24 10:23:58,011 | INFO     | traces error code: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:58,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:23:58] 2025-11-24 10:23:58,122 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:23:58] 2025-11-24 10:23:58,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:23:58] 2025-11-24 10:23:58,127 [wrapper] pilotpid: 3851763
[2025-11-24 05:23:58] 2025-11-24 10:23:58,130 [wrapper] Pilot exit status: 0
[2025-11-24 05:23:58] 2025-11-24 10:23:58,138 [wrapper] pandaids: 6895354735
[2025-11-24 05:23:58] 2025-11-24 10:23:58,175 [wrapper] cleanup supervisor_pilot  117176 3851764
[2025-11-24 05:23:58] 2025-11-24 10:23:58,178 [wrapper] Test setup, not cleaning
[2025-11-24 05:23:58] 2025-11-24 10:23:58,180 [wrapper] apfmon messages muted
[2025-11-24 05:23:58] 2025-11-24 10:23:58,183 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:23:58] 2025-11-24 10:23:58,185 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:23:58]  *** Error codes and diagnostics ***
[2025-11-24 05:23:58]     "exeErrorCode": 0,
[2025-11-24 05:23:58]     "exeErrorDiag": "",
[2025-11-24 05:23:58]     "pilotErrorCode": 0,
[2025-11-24 05:23:58]     "pilotErrorDiag": "",
[2025-11-24 05:23:58]  *** Listing of results directory ***
[2025-11-24 05:23:58] total 1315412
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 00:21 pilot3.tar.gz
[2025-11-24 05:23:58] -rwx------. 1 boincer umatlas     36292 Nov 23 00:30 runpilot2-wrapper.sh
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 00:30 queuedata.json
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas       100 Nov 23 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:23:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 23 20:41 run_atlas
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas       105 Nov 23 20:41 job.xml
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas 409510339 Nov 23 20:41 EVNT.47483658._000630.pool.root.1
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 20:41 start_atlas.sh
[2025-11-24 05:23:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 23 20:41 shared
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 20:41 input.tar.gz
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas         0 Nov 23 20:41 boinc_lockfile
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas      2785 Nov 23 20:41 pandaJob.out
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas    989786 Nov 23 20:42 agis_schedconf.cvmfs.json
[2025-11-24 05:23:58] drwx------. 5 boincer umatlas      4096 Nov 23 20:42 pilot3
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas       532 Nov 24 05:15 boinc_task_state.xml
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas      6531 Nov 24 05:20 init_data.xml
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas 920805299 Nov 24 05:22 HITS.47556137._006256.pool.root.1
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas      1046 Nov 24 05:22 memory_monitor_summary.json
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas   1526164 Nov 24 05:22 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas   1914631 Nov 24 05:22 log.47556137._006256.job.log.tgz.1
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas      8618 Nov 24 05:23 heartbeat.json
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas        95 Nov 24 05:23 pilot_heartbeat.json
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas        29 Nov 24 05:23 wrapper_checkpoint.txt
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 05:23 boinc_mmap_file
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas      4895 Nov 24 05:23 pilotlog.txt
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas   4457579 Nov 24 05:23 log.47556137._006256.job.log.1
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas       353 Nov 24 05:23 output.list
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas       620 Nov 24 05:23 runtime_log
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas   6389760 Nov 24 05:23 result.tar.gz
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas      8818 Nov 24 05:23 runtime_log.err
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas       659 Nov 24 05:23 ggGODmdrHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFfKKDmy8BuVn.diag
[2025-11-24 05:23:58] -rw-r--r--. 1 boincer umatlas     21315 Nov 24 05:23 stderr.txt
[2025-11-24 05:23:58] HITS file was successfully produced:
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas 920805299 Nov 24 05:22 shared/HITS.pool.root.1
[2025-11-24 05:23:58]  *** Contents of shared directory: ***
[2025-11-24 05:23:58] total 1305984
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas 409510339 Nov 23 20:41 ATLAS.root_0
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 23 20:41 start_atlas.sh
[2025-11-24 05:23:58] -rw-r--r--. 2 boincer umatlas    590100 Nov 23 20:41 input.tar.gz
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas 920805299 Nov 24 05:22 HITS.pool.root.1
[2025-11-24 05:23:58] -rw-------. 1 boincer umatlas   6389760 Nov 24 05:23 result.tar.gz
05:23:59 (3848014): run_atlas exited; CPU time 276694.514938
05:23:59 (3848014): called boinc_finish(0)

</stderr_txt>
]]>

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