Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:25:21 (1474090): wrapper (7.7.26015): starting
15:25:21 (1474090): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 15:25:21] Arguments: --nthreads 3
[2025-11-26 15:25:21] Threads: 3
[2025-11-26 15:25:21] Checking for CVMFS
[2025-11-26 15:25:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:25:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:25:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:25:21] 2.9.2.0 4065016 11352 87732 153324 1 81 34820748 36864001 0 130560 1 4228301 99.931 567881 779 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 15:25:21] CVMFS is ok
[2025-11-26 15:25:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:25:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:25:21] Further information can be found at the LHC@home message board.
[2025-11-26 15:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:25:21] Checking for apptainer binary...
[2025-11-26 15:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:25:21] Running /usr/bin/apptainer --version
[2025-11-26 15:25:21] apptainer version 1.4.1-1.1
[2025-11-26 15:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:25:21] thA312a
[2025-11-26 15:25:21] apptainer works
[2025-11-26 15:25:21] Set ATHENA_PROC_NUMBER=3
[2025-11-26 15:25:21] Set ATHENA_CORE_NUMBER=3
[2025-11-26 15:25:21] Starting ATLAS job with PandaID=6895353409
[2025-11-26 15:25:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:17:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:17:06] 2025-11-26 22:16:41,413 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 23:17:06] 2025-11-26 22:16:41,413 | INFO     | aborting loop
[2025-11-26 23:17:06] 2025-11-26 22:16:41,413 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:17:06] 2025-11-26 22:16:41,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:17:06] 2025-11-26 22:16:41,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:17:06] 2025-11-26 22:16:41,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:17:06] 2025-11-26 22:16:41,975 | INFO     | all payload control threads have been joined
[2025-11-26 23:17:06] 2025-11-26 22:16:42,086 | INFO     | all job control threads have been joined
[2025-11-26 23:17:06] 2025-11-26 22:16:42,418 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:42,418 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:42,455 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:42,461 | INFO     | all data control threads have been joined
[2025-11-26 23:17:06] 2025-11-26 22:16:42,981 | INFO     | [payload] control thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,046 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,092 | INFO     | [job] control thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,419 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,426 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,466 | INFO     | [data] control thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,595 | INFO     | [job] validate thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,596 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,596 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:43,609 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:44,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:17:06] 2025-11-26 22:16:45,388 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:45,851 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:51,469 | INFO     | job.realtimelogging is not enabled
[2025-11-26 23:17:06] 2025-11-26 22:16:52,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:17:06] 2025-11-26 22:16:58,972 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:17:06] 2025-11-26 22:17:01,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859221976896)>', '<ExcThread(monitor, started 139858865534720)>']
[2025-11-26 23:17:06] 2025-11-26 22:17:01,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:17:06] 2025-11-26 22:17:01,508 | INFO     | [monitor] control thread has ended
[2025-11-26 23:17:06] 2025-11-26 22:17:06,036 | INFO     | all workflow threads have been joined
[2025-11-26 23:17:06] 2025-11-26 22:17:06,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:17:06] 2025-11-26 22:17:06,037 | INFO     | traces error code: 0
[2025-11-26 23:17:06] 2025-11-26 22:17:06,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:17:06] 2025-11-26 22:17:06,089 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:17:06] 2025-11-26 22:17:06,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:17:06] 2025-11-26 22:17:06,094 [wrapper] pilotpid: 1477811
[2025-11-26 23:17:06] 2025-11-26 22:17:06,096 [wrapper] Pilot exit status: 0
[2025-11-26 23:17:06] 2025-11-26 22:17:06,104 [wrapper] pandaids: 6895353409
[2025-11-26 23:17:06] 2025-11-26 22:17:06,123 [wrapper] cleanup supervisor_pilot 1538165 1477812
[2025-11-26 23:17:06] 2025-11-26 22:17:06,125 [wrapper] Test setup, not cleaning
[2025-11-26 23:17:06] 2025-11-26 22:17:06,128 [wrapper] apfmon messages muted
[2025-11-26 23:17:06] 2025-11-26 22:17:06,130 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:17:06] 2025-11-26 22:17:06,133 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:17:06]  *** Error codes and diagnostics ***
[2025-11-26 23:17:06]     "exeErrorCode": 0,
[2025-11-26 23:17:06]     "exeErrorDiag": "",
[2025-11-26 23:17:06]     "pilotErrorCode": 0,
[2025-11-26 23:17:06]     "pilotErrorDiag": "",
[2025-11-26 23:17:06]  *** Listing of results directory ***
[2025-11-26 23:17:06] total 1304396
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc    576529 Nov 23 05:55 pilot3.tar.gz
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      5112 Nov 23 06:10 queuedata.json
[2025-11-26 23:17:06] -rwx------ 1 boinc boinc     36292 Nov 23 06:11 runpilot2-wrapper.sh
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc       100 Nov 26 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:17:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 15:25 run_atlas
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc       105 Nov 26 15:25 job.xml
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc 407210226 Nov 26 15:25 EVNT.47483658._000620.pool.root.1
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc    590099 Nov 26 15:25 input.tar.gz
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:25 start_atlas.sh
[2025-11-26 23:17:06] drwxrwx--x 2 boinc boinc      4096 Nov 26 15:25 shared
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:25 boinc_setup_complete
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      6448 Nov 26 15:25 init_data.xml
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:25 boinc_lockfile
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      2786 Nov 26 15:25 pandaJob.out
[2025-11-26 23:17:06] -rw------- 1 boinc boinc    992360 Nov 26 15:25 agis_schedconf.cvmfs.json
[2025-11-26 23:17:06] drwx------ 5 boinc boinc      4096 Nov 26 15:25 pilot3
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc       531 Nov 26 23:11 boinc_task_state.xml
[2025-11-26 23:17:06] -rw------- 1 boinc boinc        95 Nov 26 23:15 pilot_heartbeat.json
[2025-11-26 23:17:06] -rw------- 1 boinc boinc 914312025 Nov 26 23:16 HITS.47556137._006160.pool.root.1
[2025-11-26 23:17:06] -rw------- 1 boinc boinc      1022 Nov 26 23:16 memory_monitor_summary.json
[2025-11-26 23:17:06] -rw------- 1 boinc boinc   1516240 Nov 26 23:16 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:17:06] -rw------- 1 boinc boinc   1165010 Nov 26 23:16 log.47556137._006160.job.log.tgz.1
[2025-11-26 23:17:06] -rw------- 1 boinc boinc      8559 Nov 26 23:16 heartbeat.json
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc        28 Nov 26 23:16 wrapper_checkpoint.txt
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      8192 Nov 26 23:16 boinc_mmap_file
[2025-11-26 23:17:06] -rw------- 1 boinc boinc      4628 Nov 26 23:17 pilotlog.txt
[2025-11-26 23:17:06] -rw------- 1 boinc boinc   3976833 Nov 26 23:17 log.47556137._006160.job.log.1
[2025-11-26 23:17:06] -rw------- 1 boinc boinc       353 Nov 26 23:17 output.list
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc       620 Nov 26 23:17 runtime_log
[2025-11-26 23:17:06] -rw------- 1 boinc boinc   5160960 Nov 26 23:17 result.tar.gz
[2025-11-26 23:17:06] -rw------- 1 boinc boinc       666 Nov 26 23:17 zdjLDmIZHh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOdKKDmLsA7Fm.diag
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      8903 Nov 26 23:17 runtime_log.err
[2025-11-26 23:17:06] -rw-r--r-- 1 boinc boinc      6956 Nov 26 23:17 stderr.txt
[2025-11-26 23:17:06] HITS file was successfully produced:
[2025-11-26 23:17:06] -rw------- 1 boinc boinc 914312025 Nov 26 23:16 shared/HITS.pool.root.1
[2025-11-26 23:17:06]  *** Contents of shared directory: ***
[2025-11-26 23:17:06] total 1296192
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc 407210226 Nov 26 15:25 ATLAS.root_0
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc    590099 Nov 26 15:25 input.tar.gz
[2025-11-26 23:17:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:25 start_atlas.sh
[2025-11-26 23:17:06] -rw------- 1 boinc boinc 914312025 Nov 26 23:16 HITS.pool.root.1
[2025-11-26 23:17:06] -rw------- 1 boinc boinc   5160960 Nov 26 23:17 result.tar.gz
23:17:07 (1474090): run_atlas exited; CPU time 83350.421625
23:17:07 (1474090): called boinc_finish(0)

</stderr_txt>
]]>

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